Novel forms of anaerobic respiration of environmental relevance

Novel forms of anaerobic respiration continue to be discovered. Many of these are environmentally significant as they have important impacts on the fate of organic carbon and the cycling of many inorganic compounds. Furthermore, anaerobic respiration is becoming increasing recognized as a strategy for the remediation of organic and metal contaminants in the subsurface.     

Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage

Filamentous marine cyanobacteria are extraordinarily rich sources of structurally novel, biomedically relevant natural products. To understand their biosynthetic origins as well as produce increased supplies and analog molecules, access to the clustered biosynthetic genes that encode for the assembly enzymes is necessary. Complicating these efforts is the universal presence of heterotrophic bacteria in the cell wall and sheath material of cyanobacteria obtained from the environment and those grown in uni-cyanobacterial culture. Moreover, the high similarity in genetic elements across disparate secondary metabolite biosynthetic pathways renders imprecise current gene cluster targeting strategies and contributes sequence complexity resulting in partial genome coverage. Thus, it was necessary to use a dual-method approach of single-cell genomic sequencing based on multiple displacement amplification (MDA) and metagenomic library screening. Here, we report the identification of the putative apratoxin. A biosynthetic gene cluster, a potent cancer cell cytotoxin with promise for medicinal applications. The roughly 58 kb biosynthetic gene cluster is composed of 12 open reading frames and has a type I modular mixed polyketide synthase/nonribosomal peptide synthetase (PKS/NRPS) organization and features loading and off-loading domain architecture never previously described. Moreover, this work represents the first successful isolation of a complete biosynthetic gene cluster from Lyngbya bouillonii, a tropical marine cyanobacterium renowned for its production of diverse bioactive secondary metabolites.     

The habitat hectares approach to vegetation assessment: An evaluation and suggestions for improvement

Summary The habitat hectares approach is an explicit, quantitative method for assessing the quality of vegetation by adding scores that are assigned to 10 habitat attributes. We believe it will be more repeatable and transparent than other methods that rely on subjective judgement. However, we have four principal criticisms of the method as it is currently proposed: (i) measurement of some of the attributes may be subject to considerable error that varies among assessors; (ii) the comparison of each measure with a single benchmark does not accommodate appropriate disturbance regimes; (iii) the proposed combination of attributes leads to some apparent internal inconsistencies; and (iv) it is not clear how the method will actually be used in practice. We suggest modifications to address these concerns and improve the proposed method. Finally, we make additional suggestions about the method's potential application, including: separate reporting of the extent and quality of different vegetation types to avoid the inappropriate combination of measures of area and quality; valuing appropriate disturbance regimes in natural areas; and considering very carefully the application of compensation or mitigation measures.     

The competitive equilibrium between aluminium and ferric ions for the binding sites of transferrin

Human transferrin is shown to bind 2 mol of aluminium per mol of protein using spectrophotometric titration. Competitive equilibrium between aluminium and ferric ions for transferrin binding sites is observed, and a value of 2.5 (+/- 0.4) X 10(15) M-1 is found for the apparent binding constant under physiological conditions.     

Neutral and acid lipase of mouse 3T3 fibroblasts with increased adipose conversion.

In the resting state, 3T3-L1 fibroblasts become adipose converted and increase their fatty acid and triglyceride synthetase. We have found that they contain four times the neutral lipase activity and 1.5 times the acid lipase activity of logarithmically dividing cells. The activities of lysosomal acid beta-galactosidase and N-acetyl-beta-D-glucosaminidase were the same in the adipose converted and logarithmically dividing cells. The data suggest a possible relation between the increased neutral lipase activity in 3T3-L1 cells and their adipose conversion and demonstrates that the adipose converted 3T3-L1 fibroblasts, unlike true adipose cells, contain high levels of lysosomal acid hydrolases.     

Morphological characterization of extrafloral nectaries and associated ants in tropical vegetation of Los Tuxtlas,Mexico

Extrafloral nectaries (EFNs) are glands that produce sugary exudates and can be located in any vegetative or reproductive structure of the plant. The EFNs occur in different locations on the leaves, stems, inflorescences and flowers (but are not directly involved with pollination). Occurrence of EFNs on plants of coastal vegetation, tropical rain forest and cloud forest in southern Mexico was studied within Los Tuxtlas Biosphere Reserve, Veracruz. We focused on determining the identity and species richness of plants with EFNs, and describing EFNs morphologies. We found 50 species of plants with EFNs (16 families, 31 genera), which corresponds to approximately 5% of the flora reported for the field site (943 species). Trees were the life form with the greatest representation of EFNs while shrubs and epiphytes had the least representation. EFN-bearing plants were particularly well represented in the families Fabaceae, Euphorbiaceae, Convolvulaceae, Bignoniaceae, Malpighiaceae, Passifloraceae, Costaceae, Tiliaceae, while eight other families had only one species. We found six different types of EFNs according to their morphological structure. Dissimilarity analyses between plants and ant species showed that the forest in the Los Tuxtlas region has a rich array of ant species associated with EFNs, with a low niche overlap of ant species. This diversification in ant use of EFNs is of particular interest from an ecological and evolutionary perspective (potential mutualisms with adaptative value), but this deserves still further studies in detail. The present study shall provide basic information for future research in these fields of plant–animal interactions in neotropical vegetation.