IL35慢病毒质粒的提取

[目的]构建可以大规模提取IL35的新型质粒p LVX-IRES-Zs Green1-mus-IL35。[方法]质粒p LVX-IRES-Zs Green1和p UC57-mus-IL35-拼接用XhoⅠ和NotⅠ进行双酶切,将回收纯化的目的片段mus-IL35-拼接(NotⅠ/XhoⅠ)与回收纯化的载体p LVX-IRES-Zs Green1(NotⅠ/XhoⅠ)连接,连接产物命名为p LVX-IRES-Zs Green1-mus-IL35-拼接。连接产物转化DH5α感受态细胞,涂布LB Amp平板,37℃温箱培养过夜。[结果]检测慢病毒p LVX-IL35滴度为:6×10~7TU/ml,提取质粒浓度为1～2 mg/ml。鉴定引物为测序的通用引物,上游引物和下游引物离MCS区域加上目的序列,目的PCR条带大约1 600 bp,送鉴定正确菌液测序。测序结果比对正确。[结论]采用新型超量无内毒素质粒提试剂盒,可以大规模方便快速提取相关质粒。     

丹霞地貌沟谷生态效应

以广东省丹霞山为研究实例,探讨丹霞地貌特殊的沟谷生态效应.结果表明,丹霞地貌的特殊沟谷生态效应体现在以下两个方面:第一是丹霞地貌演变过程中形成了众多石峰隆起和沟谷凹陷,特殊的地貌环境使得沟谷中的生态因子与其它非丹霞地貌开阔区域产生差异,小气候相对封闭,水湿条件极好,为喜高温高湿的热带物种提供了较好的生存环境;沟谷所处位置的地理环境,如四周崖壁的光滑程度会影响到太阳光反射到沟谷的光强,这些都会对沟谷中的温湿度产生影响.第二是丹霞地貌特殊的生态条件,为沟谷地带孕育出一批热带性较强的分类群提供了可能,与相近纬度的诸多植被相比,丹霞地貌植物区系热带性明显增强,热带分布区类型所占比重比同纬度区域要大10%以上,大多数沟谷中热带性物种分布现象比较明显,藤本分布较多,蕨类植物也较丰富,耐水湿的植物区系发育良好;这实际上造成了植物水平分布上的移位,使中亚热带区域中分布有南亚热带甚至热带区域的物种,出现了由于其特殊的沟谷地貌效应而形成的与其地貌条件保持协调和平衡的演替顶级群落类型,称为地貌顶级群落.     

樟树全基因组调查

樟树是我国特有的珍贵用材和经济树种,富含多糖多酚、萜类等次生代谢物质,是香精香料、油脂化工和医药等的重要原料树种。本研究采用高通量测序技术(Illumina HiseqTM2000)首次测定了樟树基因组大小,并利用生物信息方法估计樟树杂合率、重复序列情况和GC含量等基因组信息,为全基因组测序策略的选择提供依据。主要结论如下:(1)樟树基因组大小粗略估计为760 Mb左右;(2)樟树基因组有较高的杂合率和一定的重复,杂合率约为0.65%;(3)由于樟树杂合率较高,全基因组鸟枪法策略不适合该基因组测序分析,可尝试使用BAC-to-BAC策略或fosmid策略,有利于樟树基因组的序列拼接和组装。     

Anthrax biosensor, protective antigen ion channel asymmetric blockade

The significant threat posed by biological agents (e.g. anthrax, tetanus, botulinum, and diphtheria toxins) (Inglesby, T. V., O'Toole, T., Henderson, D. A., Bartlett, J. G., Ascher, M. S., Eitzen, E., Friedlander, A. M., Gerberding, J., Hauer, J., Hughes, J., McDade, J., Osterholm, M. T., Parker, G., Perl, T. M., Russell, P. K., and Tonat, K. (2002) J. Am. Med. Assoc. 287, 2236-2252) requires innovative technologies and approaches to understand the mechanisms of toxin action and to develop better therapies. Anthrax toxins are formed from three proteins secreted by fully virulent Bacillus anthracis, protective antigen (PA, 83 kDa), lethal factor (LF, 90 kDa), and edema factor (EF, 89 kDa). Here we present electrophysiological measurements demonstrating that full-length LF and EF convert the current-voltage relationship of the heptameric PA63 ion channel from slightly nonlinear to highly rectifying and diode-like at pH 6.6. This effect provides a novel method for characterizing functional toxin interactions. The method confirms that a previously well characterized PA63 monoclonal antibody, which neutralizes anthrax lethal toxin in animals in vivo and in vitro, prevents the binding of LF to the PA63 pore. The technique can also detect the presence of anthrax lethal toxin complex from plasma of infected animals. The latter two results suggest the potential application of PA63 nanopore-based biosensors in anthrax therapeutics and diagnostics.     

Biochemical and strain properties of CJD prions: complexity versus simplicity

Prions, the agents responsible for transmissible spongiform encephalopathies, are infectious proteins consisting primarily of scrapie prion protein (PrP(Sc)), a misfolded, β-sheet enriched and aggregated form of the host-encoded cellular prion protein (PrP(C)). Their propagation is based on an autocatalytic PrP conversion process. Despite the lack of a nucleic acid genome, different prion strains have been isolated from animal diseases. Increasing evidence supports the view that strain-specific properties may be enciphered within conformational variations of PrP(Sc). In humans, sporadic Creutzfeldt-Jakob disease (sCJD) is the most frequent form of prion diseases and has demonstrated a wide phenotypic and molecular spectrum. In contrast, variant Creutzfeldt-Jakob disease (vCJD), which results from oral exposure to the agent of bovine spongiform encephalopathy, is a highly stereotyped disease, that, until now, has only occurred in patients who are methionine homozygous at codon 129 of the PrP gene. Recent research has provided consistent evidence of strain diversity in sCJD and also, unexpectedly enough, in vCJD. Here, we discuss the puzzling biochemical/pathological diversity of human prion disorders and the relationship of that diversity to the biological properties of the agent as demonstrated by strain typing in experimental models.     

金属螯合载体定向固定化木瓜蛋白酶的研究

以磁性金属螯合琼脂糖微球为载体,利用金属螯合配体（IDACu²⁺）与蛋白质表面供电子氨基酸相互作用的原理,定向固定了木瓜蛋白酶。固定化最适条件为Cu²⁺1.5×10^-2mol/g载体、固定化时间4h、固定化pH7.0、给酶量30mg/g载体。固定化酶的最适反应温度70℃、最适反应pH8.0,固定化酶的热稳定性明显高于溶液酶,固定化酶活力回收为68.4％,且有较好的操作稳定性,载体重复使用5次后固定化酶酶活为首次固定化酶79.71%。     

钾肥及与秸秆配施对紫色土作物产量和微生物群落结构的影响

基于紫色菜园土壤莴笋-白菜-甜玉米轮作4年12季连续定位施钾肥试验,研究不同种类钾肥及用量对重庆地区紫色菜园土上作物产量和土壤微生物群落结构的影响,为该地区作物生产确定合理的施钾技术提供科学依据。结果表明,在施用氮磷肥基础上,不同钾肥处理莴笋、白菜、甜玉米产量均显著提高;从3种作物4年平均产量和钾肥效益看,以单施适量化学钾(K_2)、单施适量秸秆钾(M_2)和秸秆还田配施少量化学钾(K_1+M_1)的施钾肥模式对白菜的增产效果好,增产28.05%—30.27%;M_2和K_1+M_1施钾肥模式对莴笋的增产效果较好,增产13.89%和13.81%;K_1+M_1施钾肥模式对甜玉米的增产效果最好,增产15.10%,表明秸秆还田配施少量化学钾(K_1+M_1)模式在供试3种作物生产中具有很好的应用前景。不同施钾处理对土壤微生物群落结构及丰度均会产生一定影响,以秸秆还田配施少量化学钾肥(K_1+M_1)对提高土壤细菌、真菌、革兰氏阳性菌的作用较好,并显著增加土壤微生物总PLFA含量,缓解对土壤微生物生存环境的胁迫,说明K_1+M_1能为土壤微生物的生长繁育创造有利环境。莴笋、白菜、甜玉米3种作物4年平均产量与土壤细菌、真菌、革兰氏阳性菌和革兰氏阴性菌数量间存在显著相关性(P0.05),而不同钾肥处理对土壤微生物特征具有一定影响,说明施钾肥可能会调节土壤微生物特征,从而促进作物增产。