The crustacean ichnofossil Palaxius associated with callianassid body fossils in an Eocene methane-seep limestone, Humptulips Formation, Olympic Peninsula, Washington

Crustacean microcoprolites are preserved along with crustacean megafossils in an Eocene limestone within the Humptulips Formation in Grays Harbor County, Washington. The limestone formed at a methane seep, as revealed by early diagenetic carbonate phases resembling those of other seep limestones, δ¹³C_carbonate values as low as −27‰, and lipid biomarkers of prokaryotes involved in anaerobic oxidation of methane with δ¹³C values as low as −110‰. Recognizable crustacean megafossils are chiefly isolated chelipeds, akin to those of callianassid shrimp. The microcoprolites are pierced by ten longitudinal canals with crescent-shaped outlines in cross-section, arranged in two symmetrical groups. The symmetry plan and number of canals of the microcoprolites identify the Humptulips ichnospecies as Palaxius habanensis Brönnimann & Norton. The occurrence of decapod fossils along with microcoprolites suggests that callianassid shrimp were the producers of the Palaxius , supporting earlier work that attributed this ichnogenus to callianassids.     

treegraph: automated drawing of complex tree figures using an extensible tree description format

treegraph assists in producing complex ready‐to‐publish figures of phylogenetic trees. The TGF format used by the program automates formatting of several different statistical support value types (confidence estimates) per tree node. Moreover, internal text and graphical labels are automatically arranged at the nodes as are annotations for clades or groups of terminals. treegraph imports nexus trees and related file formats. Beyond common tree edit operations, simultaneous pruning of subtrees (simplification of the tree to higher order clades) and saving of subtrees is possible. treegraph exports to the standard vector graphics formats Scalable Vector Graphics and PostScript.     

The effects of selection,drift and genetic variation on life‐history trait divergence among insular populations of natterjack toad,Bufo calamita

Although loss of genetic variation is frequently assumed to be associated with loss of adaptive potential, only few studies have examined adaptation in populations with little genetic variation. On the Swedish west coast, the northern fringe populations of the natterjack toad Bufo calamita inhabit an atypical habitat consisting of offshore rock islands. There are strong among‐population differences in the amount of neutral genetic variation, making this system suitable for studies on mechanisms of trait divergence along a gradient of within‐population genetic variation. In this study, we examined the mechanisms of population divergence using Q_ST–F_ST comparisons and correlations between quantitative and neutral genetic variation. Our results suggest drift or weak stabilizing selection across the six populations included in this study, as indicated by low Q_ST–F_ST values, lack of significant population × temperature interactions and lack of significant differences among the islands in breeding pond size. The six populations included in this study differed in both neutral and quantitative genetic variation. Also, the correlations between neutral and quantitative genetic variation tended to be positive, however, the relatively small number of populations prevents any strong conclusions based on these correlations. Contrary to the majority of Q_ST–F_ST comparisons, our results suggest drift or weak stabilizing selection across the examined populations. Furthermore, the low heritability of fitness‐related traits may limit evolutionary responses in some of the populations.     

Why study the use of animal products in traditional medicines?

The World Health Organization (WHO) estimates that as many as 80% of the world's more than six billion people rely primarily on animal and plant-based medicines. The healing of human ailments by using therapeutics based on medicines obtained from animals or ultimately derived from them is known as zootherapy. The phenomenon of zootherapy is marked both by a broad geographical distribution and very deep historical origins. Despite their importance, studies on the therapeutic use of animals and animal parts have been neglected, when compared to plants. This paper discusses some related aspects of the use of animals or parts thereof as medicines, and their implications for ecology, culture (the traditional knowledge), economy, and public health.     

Population structure in an isolated Arctic fox, Vulpes lagopus, population: the impact of geographical barriers

The genetic composition of a population reflects several aspects of the organism and its environment. The Icelandic Arctic fox population exceeds 8000 individuals and is comprised of both coastal and inland foxes. Several factors may affect within-population movement and subsequent genetic population structure. A narrow isthmus and sheep-proof fences may prevent movement between the north-western and central part and glacial rivers may reduce movement between the eastern and central part of Iceland. Moreover, population density and habitat characteristics can influence movement behaviour further. Here, we investigate the genetic structure in the Icelandic Arctic fox population ( n  = 108) using 10 microsatellite loci. Despite large glacial rivers, we found low divergence between the central and eastern part, suggesting extensive movement between these areas. However, both model- and frequency-based analyses suggest that the north-western part is genetically differentiated from the rest of Iceland (F_ST = 0.04, D_S = 0.094), corresponding to 100–200 generations of complete isolation. This suggests that the fences cannot be the sole cause of divergence. Rather, the isthmus causes limited movement between the regions, implying that protection in the Hornstrandir Nature Reserve has a minimal impact on Arctic fox population size in the rest of Iceland.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 97 , 18–26.     

Restoring freshwater ecosystems in riverine landscapes: the roles of connectivity and recovery processes

1. This paper introduces key messages from a number of papers emanating from the Second International Symposium on Riverine Landscapes held in August 2004 in Sweden, focusing on river restoration. Together these papers provide an overview of the science of river restoration, and point out future research needs. 2. Restoration tests the feasibility of recreating complex ecosystems from more simple and degraded states, thereby presenting a major challenge to ecological science. Therefore, close cooperation between practitioners and scientists would be beneficial, but most river restoration projects are currently performed with little or no scientific involvement. 3. Key messages emanating from this series of papers are: The scope, i.e. the maximum and minimum spatial extent and temporal duration of habitat use, of species targeted for restoration should be acknowledged, so that all relevant stages in their life cycles are considered. Species that have been lost from a stream cannot be assumed to recolonise spontaneously, calling for strategies to ensure the return of target species to be integrated into projects. Possible effects of invasive exotic species also need to be incorporated into project plans, either to minimise the impact of exotics, or to modify the expected outcome of restoration in cases where extirpation of exotics is impractical. 4. Restoration of important ecological processes often implies improving connectivity of the stream. For example, longitudinal and lateral connectivity can be enhanced by restoring fluvial dynamics on flood‐suppressed rivers and by increasing water availability in rivers subject to water diversion or withdrawal, thereby increasing habitat and species diversity. Restoring links between surface and ground water flow enhances vertical connectivity and communities associated with the hyporheic zone. 5. Future restoration schemes should consider where in the catchment to locate projects to make restoration most effective, consider the cumulative effects of many small projects, and evaluate the potential to restore ecosystem processes under highly constrained conditions such as in urban areas. Moreover, restoration projects should be properly monitored to assess whether restoration has been successful, thus enabling adaptive management and learning for the future from both successful and unsuccessful restorations.     

Using predictive models to estimate effects of flow regulation on net-spinning caddis larvae in North Swedish rivers

1. Effects of flow regulation on abundance and richness of net-spinning caddis larvae (Hydropsychoidea; Trichoptera) were examined in fifty-two North Swedish rivers. Models based on conditions at unregulated sites were used to predict densities at impacted sites and the residuals, i.e. the differences between observed and predicted numbers, were used as measures of the effects.
2. Two broad categories of impacted sites were identified. Sites with regulated but unreduced flow often have reduced seasonal flow variation and slightly enhanced short-term variation, while those with reduced flow usually have long periods of low and stable flow occasionally interrupted by short periods of violently fluctuating flow.
3. The abundance of net-spinning caddis larvae was significantly lower than predicted at both types of sites (reduction 30%), while richness was significantly reduced only at sites with reduced flow (reduction 20%).
4. A subsequent analysis of the relationship between the effects and variables altered by flow regulations, e.g. flow magnitude and flow variation, indicated that species richness was primarily affected by the occurrence of periods with zero flow, while negative effects of abundance were associated with high flow variability.
5. Significant negative effects on the abundance of individual taxa were observed for Cheumatopsyche lepida and Hydropsyche pellucidula at sites with regulated but unreduced flow.
6. Analyses of the relationships between the effects and regulation-related variables suggest that H. siltalai was significantly negatively affected by the occurrence of zero flow and that negative effects on Arctopsyche ladogensis were associated with flow reduction and high flow variability.