Polymorphisms in BMP-2 gene and their associations with growth traits in goats

BMPs plays an important role in skeletal development. In this study, PCR-SSCP and DNA sequencing methods were employed to screen the genetic variation of caprine BMP-2 gene in 299 goats from three breeds (Boer goat, Chinese Xuhuai white goat and Chinese Haimen goat). Three fragments of BMP-2 gene were investigated, only 3′ flanking region of BMP-2 gene showed polymorphism. The alignment between nucleotide sequences of AY714781.1 in GenBank and the sequencing results of three PCR products with different patterns revealed that there was one mutation (AY714781.1: g.A172G) in 3′ flanking region of BMP-2 gene, which constructed three genotypes (AA, AB, BB). The frequencies of allele A and genotype AA were dominant in all three breeds. Frequency of allele B in Haimen goat breed was significantly lower than that of the other two breeds. The genotype distributions were in good agreement with Hardy-Weinberg equilibrium (P>0.05) in each breed. The PIC (Polymorphism Information Content) values in three populations were 0.3261, 0.2558, 0.1663 for Boer goat, Xuhuai White goat and Haimen goat respectively. It was indicated that individuals of Boer goats with genotype BB were significantly higher than those of individuals with genotype AA in body trunk index (P<0.01). No polymorphism was detected in the exon3.     

Theoretical investigation of CdSe clusters: influence of solvent and ligand on nanocrystals

Based on experimental zinc blende and wurtzite models of CdSe nanocrystals, four clusters of CdSe, seven Se-Cd-ligand structures, and their characters are studied at DFT/B3LYP/Lanl2dz theoretical level. Cd₃Se₃, (Cd₃Se₃)₂ and (Cd₃Se₃)₃ clusters which have a ring with six atoms are similar to wurtzite structures, Cd₄Se₄ have resemblant conformation with zinc blende for they are all composed of tetrahedron. Calculated Raman spectra of Cd₃Se₃, Cd₄Se₄, (Cd₃Se₃)₂ and (Cd₃Se₃)₃ are about 175 cm⁻¹ which is consistent with the experimental result. Then, through investigation of Se-Cd-ligand clusters, we find that all Se-Cd-ligand structures have similar characters because main influence of ligands on nanocrystals comes from thiol. Finally, we testify that both solvent and ligand make absorption peaks shift to blue, compared with those in gas phase and without ligand. Under these conditions, calculated data of four clusters are almost identical with the absorption peaks of CdSe nanocrystals. Besides, we also prove that the absorption peaks of four clusters are the transitions from HOMO to LUMO or from d to p orbitals. And HOMO-LUMO gaps reduce in order of Cd₃Se₃, (Cd₃Se₃)₂ and (Cd₃Se₃)₃, which is induced by the quantum size effect.     

CDD: a curated Entrez database of conserved domain alignments

The Conserved Domain Database (CDD) is now indexed as a separate database within the Entrez system and linked to other Entrez databases such as MEDLINE(R). This allows users to search for domain types by name, for example, or to view the domain architecture of any protein in Entrez's sequence database. CDD can be accessed on the WorldWideWeb at http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=cdd. Users may also employ the CD-Search service to identify conserved domains in new sequences, at http://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi. CD-Search results, and pre-computed links from Entrez's protein database, are calculated using the RPS-BLAST algorithm and Position Specific Score Matrices (PSSMs) derived from CDD alignments. CD-Searches are also run by default for protein-protein queries submitted to BLAST(R) at http://www.ncbi.nlm.nih.gov/BLAST. CDD mirrors the publicly available domain alignment collections SMART and PFAM, and now also contains alignment models curated at NCBI. Structure information is used to identify the core substructure likely to be present in all family members, and to produce sequence alignments consistent with structure conservation. This alignment model allows NCBI curators to annotate 'columns' corresponding to functional sites conserved among family members.     

Chronic beta-adrenoreceptor stimulation in vivo decreased Bcl-2 and increased Bax expression but did not activate apoptotic pathways in mouse heart

Prolonged activation of the sympathetic nervous system is deleterious to heart function. In vitro beta1-adrenergic activation promotes apoptosis, whereas beta2-adrenergic activation reduces apoptosis in cultured adult cardiomyocytes. To determine the effect of chronic catecholamine infusion in vivo, we measured apoptosis marker expression in C57Bl/6 and catecholamine-sensitive Egr-1 deficient mice after treatment with the nonspecific beta-adrenergic agonist, isoproterenol, the beta1-specific agonist, dobutamine, or the beta2-specific agonist, metaproterenol. Antiapoptotic and proapoptotic protein expression, cytochrome c release and caspases 3, 9, and 12 activation products were measured on immunoblots. Catecholamine-treated mice had decreased Bcl-2 and increased Bax and BNIP1 expression, suggesting mitochondria-dependent apoptosis pathway activation. However, cytosolic cytochrome c or caspase 3 or 9 activation products were not detected. In mice, increased molecular chaperone expression and caspase 12 activation characterize endoplasmic-reticulum-driven apoptosis. Clusterin expression was increased in catecholamine-treated mice, but GRP78 expression was not increased, and caspase 12 activation products were not detected. Thus, neither the mitochondrial nor the endoplasmic apoptotic pathway was fully activated. Further, Egr-1 deficiency did not increase cardiac apoptosis. We conclude that although chronic in vivo infusion of beta1- or beta2-adrenergic receptor agonists partially activates the apoptosis program, full activation of the caspase cascade requires more, or other, cardiac insults.     

Prevention of spontaneous breast carcinoma by prophylactic vaccination with dendritic/tumor fusion cells

Genetically modified mice with spontaneous development of mammary carcinoma provide a powerful tool to study the efficacy of tumor vaccines, since they mimic breast cancer development in humans. We used a transgenic murine model expressing polyomavirus middle T oncogene and mucin 1 tumor-associated Ag to determine the preventive effect of a dendritic/tumor fusion cell vaccine. The MMT (a transgenic murine model) mice developed mammary carcinoma between the ages of 65-108 days with 100% penetrance. No spontaneous CTL were detected. However, prophylactic vaccination of MMT mice with dendritic/tumor fusion cells induced polyclonal CTL activity against spontaneous mammary carcinoma cells and rendered 57-61% of the mice free of the disease at the end of experiment (180 days). Furthermore, the level of CTL activity was maintained with multiple vaccinations. The antitumor immunity induced by vaccination with dendritic/tumor fusion cells reacted differently to injected tumor cells and autochthonous tumor. Whereas the injected tumor cells were rejected, the autochthonous tumor evaded the attack and was allowed to grow. Collectively these results indicate that prophylactic vaccination with dendritic/tumor fusion cells confers sufficient antitumor immunity to counter the tumorigenesis of potent oncogenic products. The findings in the present study are highly relevant to cancers in humans.     

白细胞介素－2镇痛功能位点的研究

白细胞介素-2(IL-2)是重要的免疫调节因子,近来发现还有中枢镇痛作用,用不同IL-2突变体测定其对大鼠痛阈的影响,发现完全丧失免疫刺激作用的20Leu-IL-2(20Asp→Leu)仍能显著提高大鼠的痛阈,其作用强度与天然IL-2无显著差异,而另一突变体45Val-IL-2(45Tyr→Val)虽保留免疫学活性却不能提高大鼠的痛阈.这些结果证明IL-2分子中具有镇痛作用与具有免疫作用的功能位点是相互独立的;IL-2分子中第45位Tyr对IL-2镇痛作用的发挥起重要作用.     

白细胞介素－2镇痛功能位点的研究

白细胞介－２（ＩＬ－２）是重要的免疫调节因子,近来发现还有中枢镇痛作用,用不同ＩＬ－２突变体测定其对大鼠痛阈的影响,发现完全丧失免疫刺激作用的２０Ｌｅｕ－ＩＬ－２（２０Ａｓｐ→Ｌｅｕ）仍能显著提高大鼠的痛阈,其作用强度与天然ＩＬ－２无显著差异,而另一突变体４５Ｖａｌ－ＩＬ－２（４５Ｔｙｒ→Ｖａｌ）虽保留免疫学活性却不能提高大鼠的痛阈;这些结果证明ＩＬ－２分子中具有镇痛作用与具有免疫作用与具有免疫作     

Induction of impaired antitumor immunity by fusion of MHC class II-deficient dendritic cells with tumor cells

To dissect the role of Ag presentation through MHC class I and/or II pathways by dendritic cell (DC)-tumor fusion cells, we have created various types of DC-tumor fusion cells by alternating fusion cell partners. Fusions of MC38/MUC1 carcinoma cells with DC from wild-type (WT-DC), MHC class I knockout (IKO-DC), class II knockout (IIKO-DC), or class I and II knockout (I/IIKO-DC) mice created WTDC-fusion cells (FC), IKO-FC, IIKO-FC, and I/IIKO-FC, respectively. MHC class II- and MUC1-positive fusion cells were constructed by fusion of B16/MUC1 melanoma cells with IKO-DC (IKO/B16-FC). Immunization of MUC1 transgenic mice with 5 x 10(5) WTDC-FC, IKO-FC, IIKO-FC, or I/IIKO-FC provided 100, 91.7, 61.5, and 15.4% protection, respectively, against tumor challenge with MC38/MUC1 cells. In contrast, all mice immunized with irradiated MC38/MUC1 tumor cells or WT-DC developed tumors. One group of mice was immunized with 5 x 10(5) IKO/B16-FC and then challenged with B16/Ia(+)/MUC1 on one flank and MC38/MUC1 on the other flank. Immunization of these mice with IKO/B16-FC resulted in 100 and 78.6% protection against B16/Ia(+)/MUC1 and MC38/MUC1 tumor challenge, respectively. The antitumor immunity induced by immunization with IKO/B16-FC was able to inhibit the growth of MHC class II-negative tumor. In addition, in vivo results correlated with the induction of Ag-specific CTL. Collectively, the data indicate that MHC class II Ag presentation targeting activation of CD4 T cells is indispensable for antitumor immunity.     

应用ISSR-PCR分析蒙古栎种群的遗传多样性

本研究应用ISSR标记技术对东北地区的优势树种蒙古栎(Quercus mongolica)的25个种群遗传多样性进行了分析, 目的是为蒙古栎早期选择提供依据。从60条ISSR引物中筛选出10个特异性强、稳定性好的引物进行ISSR分析。共获得位点数71个, 其中多态位点数56个, 多态位点百分率为78.87%。PopGene分析结果表明: 种群的平均多态位点百分率为45.2%, Shannon表型多样性指数(I)平均值为0.25, 具有较高的遗传多样性, 种群间存在一定程度的基因流(N_m为1.3818)和遗传分化(Nei’s信息多样性指数平均值为0.1068, G_st平均值为0.2657), 种群内的基因多样度占总种群的73.43%, 种群间占26.57%, 表明蒙古栎种群的变异主要来源于种群内。结合聚类分析和地理变异规律把种群划分为两个大的种群组: 小兴安岭种群组和长白山种群组。以上结果可为栎属种质资源的保护和利用以及物种分化研究提供基础资料。