Embryological Studies on Narcissus tazetta var. chinensis

Chinese narcissus (Narcissus tazetta var.chinensis Roem) blooms but has no seeds.Embryological studies on the species were conducted to discover the causes of its sterility.Its anther wall is composed of four layers of cells,and its tapetum is of the secretory type.The cytokinesis of microspore mother cells is of the successive type,and the tetrad is tetrahedral.During meiosis of microspore mother cells,some chromosomes lagged,and several micronuclei were found in tetrads.Only 27.7% of the pollen grains contained full cytoplasm,and 1.3% of them germinated in culture medium.No pollen grain,however,could germinate on the stigma.The ovary is trilocular with axile placenta,and the ovules are bitegmic,tenuinucellate,and anatropous.Its embryo sac is of the polygonum type.Most embryo sacs degenerated,and only about 4.5% of the ovules contained a normal embryo sac with an egg cell,two synergids,three antipodal,and a central cell containing two polar nuclei.One reason for the sterility of Chinese narcissus is the abnormality of microsporogenesis and megasporogenesis,in which only a few functional pollen grains and embryo sacs are produced.The other reason is that the pollen grains cannot germinate on the stigma.     

Soil organic carbon changes as influenced by agricultural land use and management: a case study in Yanhuai Basin, Beijing, China

The effects of agricultural land use and management practices on soil organic carbon (SOC) are of great concern. In this study, SOC changes were investigated in sandy loam soils (Ustochrepts, USDA Soil Taxonomy) under orchard, vegetable, corn (Zea maize L.), and soybean (Glycine max L.) cultivation in northern China. The corn fields were further classified into three categories based on their inputs, i.e. high-input, mid-input, and low-input corn fields. In April 2005, a total of 197 soil samples were collected from 42 soil sites within 100 cm soil depth in Yanhuai Basin, Beijing, China. SOC contents were determined using rapid dichromate oxidation, and ANOVA statistical analysis was used to test the significances between land use and management practices at p<0.05. The results showed that: (1) the effects of land use and management practices on SOC primarily occurred within the topsoil (0–25 cm), and the SOC contents sharply decreased with the increase in soil depth. (2) SOC content and density values of orchard, vegetable, and high-input corn fields were higher than those of soybean, mid- and low-input corn fields.     

An Integrated Approach for Analyzing Clinical Genomic Variant Data from Next-Generation Sequencing

Next-generation sequencing (NGS) technologies provide the potential for developing high-throughput and low-cost platforms for clinical diagnostics. A limiting factor to clinical applications of genomic NGS is downstream bioinformatics analysis for data interpretation. We have developed an integrated approach for end-to-end clinical NGS data analysis from variant detection to functional profiling. Robust bioinformatics pipelines were implemented for genome alignment, single nucleotide polymorphism (SNP), small insertion/deletion (InDel), and copy number variation (CNV) detection of whole exome sequencing (WES) data from the Illumina platform. Quality-control metrics were analyzed at each step of the pipeline by use of a validated training dataset to ensure data integrity for clinical applications. We annotate the variants with data regarding the disease population and variant impact. Custom algorithms were developed to filter variants based on criteria, such as quality of variant, inheritance pattern, and impact of variant on protein function. The developed clinical variant pipeline links the identified rare variants to Integrated Genome Viewer for visualization in a genomic context and to the Protein Information Resource’s iProXpress for rich protein and disease information. With the application of our system of annotations, prioritizations, inheritance filters, and functional profiling and analysis, we have created a unique methodology for downstream variant filtering that empowers clinicians and researchers to interpret more effectively the relevance of genomic alterations within a rare genetic disease.     

Clinical,Virological and Immunological Features from Patients Infected with Re-Emergent Avian-Origin Human H7N9 Influenza Disease of Varying Severity in Guangdong Province

BackgroundThe second wave of avian influenza H7N9 virus outbreak in humans spread to the Guangdong province of China by August of 2013 and this virus is now endemic in poultry in this region.MethodsFive patients with H7N9 virus infection admitted to our hospital during August 2013 to February 2014 were intensively investigated. Viral load in the respiratory tract was determined by quantitative polymerase chain reaction (Q-PCR) and cytokine levels were measured by bead-based flow cytometery.ResultsFour patients survived and one died. Viral load in different clinical specimens was correlated with cytokine levels in plasma and broncho-alveolar fluid (BALF), therapeutic modalities used and clinical outcome. Intravenous zanamivir appeared to be better than peramivir as salvage therapy in patients who failed to respond to oseltamivir. Higher and more prolonged viral load was found in the sputum or endotracheal aspirates compared to throat swabs. Upregulation of proinflammatory cytokines IP-10, MCP-1, MIG, MIP-1α/β, IL-1β and IL-8 was found in the plasma and BALF samples. The levels of cytokines in the plasma and viral load were correlated with disease severity. Reactivation of herpes simplex virus type 1(HSV-1) was found in three out of five patients (60%).ConclusionExpectorated sputum or endotracheal aspirate specimens are preferable to throat swabs for detecting and monitoring H7N9 virus. Severity of the disease was correlated to the viral load in the respiratory tract as well as the extents of cytokinemia. Reactivation of HSV-1 may contribute to clinical outcome.     

黔产毛萼香茶菜二萜成分

综合利用硅胶、凝胶、MCI等柱层析方法从毛萼香茶菜中进行分离、纯化到10个二萜化合物,结合MS、1H NMR、13C NMR和相关文献资料分别鉴定为6-乙酰基-毛萼晶B(1)、毛萼晶O(2)、12-hydroxydehydro-abietic acid(3)、Neorabdosin(4)、毛萼晶D(5)、毛萼晶E(6)、毛萼晶B(7)、毛萼晶N(8)、Coetsoidin A(9)、毛萼晶L(10)。其中化合物1为新天然产物,3为首次从该植物中分离。