干旱年份三江平原沼泽甲烷(CH4)排放及影响因子

为了研究淡水沼泽CH4排放的影响因子及其机制,在中国东北部的三江平原样地观测了CH4排放通量以及部分影响因子.结果表明,在2003年4～10月生长季内,毛果苔草沼泽CH4通量平均值为3.30 mg·m-2·h-1(最小值为0.65 mg·m-2·h-1,最大值为13.47 mg·m-2·h-1),低于小叶章沼泽化草甸CH4通量平均值4.91 mg·m-2·h-1(最小值为-0.12 mg·m-2·h-1,最大值为16.25 mg·m-2·h-1).在不同阶段,两种类型沼泽CH4通量有明显的变化,控制因子也不一样.4月份低温限制了CH4通量,两种类型沼泽差异很小.5～7月下旬,小叶章沼泽化草甸CH4通量显著高于毛果苔草沼泽CH4通量(P＜0.01),这种差异是由融冻作用造成的.8月份,植株密度和剖面中活性有机碳的浓度成为主要的影响因子,毛果苔草沼泽CH4通量比小叶章沼泽化草甸高.     

湿地生态系统土壤温度对气温的响应特征及对CO2排放的影响

通过2年的野外定位观测,研究了沼泽湿地土壤温度对气温变化的响应特征,以及土壤温度对沼泽湿地植物 土壤系统CO₂排放的影响,并对CO₂排放的季节性变化进行模拟计算.结果表明,随融冻作用开始,沼泽湿地土壤温度对气温变化的响应强度不断增大,根层土壤温度与气温间呈显著指数关系（R²=0.94,P<0.01）,但不同深度土壤温度对气温变化的响应强度存在一定的差异,表现为随土壤深度的增加,二者之间的相关系数变小,土壤温度对气温的响应强度减弱.沼泽湿地植物 土壤系统CO₂排放与根层土壤温度有关,二者呈显著指数相关关系（R²=0.84,P<0.01）,利用模型模拟计算出沼泽湿地2003年生长季植物 土壤系统CO₂排放通量平均值为664.5±213.9 mg·m^-2·h^-1,野外定位观测值为634.0±227.7 mg·m^-2·h^-1,二者之间差值不大,表明利用此方法可以对沼泽湿地生长季CO₂排放进行估算.     

An ER Complex of ODR-4 and ODR-8/Ufm1 Specific Protease 2 Promotes GPCR Maturation by a Ufm1-Independent Mechanism

Despite the importance of G-protein coupled receptors (GPCRs) their biogenesis is poorly understood. Like vertebrates, C. elegans uses a large family of GPCRs as chemoreceptors. A subset of these receptors, such as ODR-10, requires the odr-4 and odr-8 genes to be appropriately localized to sensory cilia. The odr-4 gene encodes a conserved tail-anchored transmembrane protein; the molecular identity of odr-8 is unknown. Here, we show that odr-8 encodes the C. elegans ortholog of Ufm1-specific protease 2 (UfSP2). UfSPs are cysteine proteases identified biochemically by their ability to liberate the ubiquitin-like modifier Ufm1 from its pro-form and protein conjugates. ODR-8/UfSP2 and ODR-4 are expressed in the same set of twelve chemosensory neurons, and physically interact at the ER membrane. ODR-4 also binds ODR-10, suggesting that an ODR-4/ODR-8 complex promotes GPCR folding, maturation, or export from the ER. The physical interaction between human ODR4 and UfSP2 suggests that this complex''s role in GPCR biogenesis may be evolutionarily conserved. Unexpectedly, mutant versions of ODR-8/UfSP2 lacking catalytic residues required for protease activity can rescue all odr-8 mutant phenotypes tested. Moreover, deleting C. elegans ufm-1 does not alter chemoreceptor traffic to cilia, either in wild type or in odr-8 mutants. Thus, UfSP2 proteins have protease- and Ufm1-independent functions in GPCR biogenesis.     

Replication Study of ESCC Susceptibility Genetic Polymorphisms Locating in the ADH1B-ADH1C-ADH7 Cluster Identified by GWAS

China was one of the countries with highest esophageal squamous cell carcinoma (ESCC) incidence and mortality worldwide. Alcohol drinking has been identified as a major environmental risk-factor related to ESCC. The alcohol dehydrogenase (ADH) family are major enzymes involved in the alcohol-metabolizing pathways, including alcohol dehydrogenase 1B (ADH1B) and ADH1C. Interestingly, ADH1B and ADH1C genes locate tandemly with ADH7 in a genomic segment as a gene cluster, and are all polymorphic. Several ESCC susceptibility single nucleotide polymorphisms (SNPs) of the ADH1B-ADH1C-ADH7 cluster have been identified previously through a genome-wide association study (GWAS). In the study, we examined the association between five ADH1B-ADH1C-ADH7 cluster SNPs (rs1042026, rs17033, rs1614972, rs1789903 and rs17028973) and risk of developing ESCC. Genotypes were determined in two independent case-control sets from two regions of China. Odds ratios (ORs) and 95% confidence intervals (CIs) were estimated by logistic regression. Our data demonstrated that these ADH1B-ADH1C-ADH7 cluster SNPs confer susceptibility to ESCC in these two case-control sets, which were consistent to results of the previous GWAS.     

TNF-α Mediated Increase of HIF-1α Inhibits VASP Expression,Which Reduces Alveolar-Capillary Barrier Function during Acute Lung Injury (ALI)

Acute lung injury (ALI) is an inflammatory disorder associated with reduced alveolar-capillary barrier function and increased pulmonary vascular permeability. Vasodilator-stimulated phosphoprotein (VASP) is widely associated with all types of modulations of cytoskeleton rearrangement-dependent cellular morphology and function, such as adhesion, shrinkage, and permeability. The present studies were conducted to investigate the effects and mechanisms by which tumor necrosis factor-alpha (TNF-α) increases the tight junction permeability in lung tissue associated with acute lung inflammation. After incubating A549 cells for 24 hours with different concentrations (0–100 ng/mL) of TNF-α, 0.1 to 8 ng/mL TNF-α exhibited no significant effect on cell viability compared with the 0 ng/mL TNF-α group (control group). However, 10 ng/mL and 100 ng/mL TNF-α dramatically inhibited the viability of A549 cells compared with the control group (*p<0.05). Monolayer cell permeability assay results indicated that A549 cells incubated with 10 ng/mL TNF-α for 24 hours displayed significantly increased cell permeability (*p<0.05). Moreover, the inhibition of VASP expression increased the cell permeability (*p<0.05). Pretreating A549 cells with cobalt chloride (to mimic a hypoxia environment) increased protein expression level of hypoxia inducible factor-1α (HIF-1α) (*p<0.05), whereas protein expression level of VASP decreased significantly (*p<0.05). In LPS-induced ALI mice, the concentrations of TNF-α in lung tissues and serum significantly increased at one hour, and the value reached a peak at four hours. Moreover, the Evans Blue absorption value of the mouse lung tissues reached a peak at four hours. The HIF-1α protein expression level in mouse lung tissues increased significantly at four hours and eight hours (**p<0.001), whereas the VASP protein expression level decreased significantly (**p<0.01). Taken together, our data demonstrate that HIF-1α acts downstream of TNF-α to inhibit VASP expression and to modulate the acute pulmonary inflammation process, and these molecules play an important role in the impairment of the alveolar-capillary barrier.     

Effects of Blood Pressure and Sex on the Change of Wave Reflection: Evidence from Gaussian Fitting Method for Radial Artery Pressure Waveform

An early return of the reflected component in the arterial pulse has been recognized as an important indicator of cardiovascular risk. This study aimed to determine the effects of blood pressure and sex factor on the change of wave reflection using Gaussian fitting method. One hundred and ninety subjects were enrolled. They were classified into four blood pressure categories based on the systolic blood pressures (i.e., ≤110, 111–120, 121–130 and ≥131 mmHg). Each blood pressure category was also stratified for sex factor. Electrocardiogram (ECG) and radial artery pressure waveforms (RAPW) signals were recorded for each subject. Ten consecutive pulse episodes from the RAPW signal were extracted and normalized. Each normalized pulse episode was fitted by three Gaussian functions. Both the peak position and peak height of the first and second Gaussian functions, as well as the peak position interval and peak height ratio, were used as the evaluation indices of wave reflection. Two-way ANOVA results showed that with the increased blood pressure, the peak position of the second Gaussian significantly shorten (P<0.01), the peak height of the first Gaussian significantly decreased (P<0.01) and the peak height of the second Gaussian significantly increased (P<0.01), inducing the significantly decreased peak position interval and significantly increased peak height ratio (both P<0.01). Sex factor had no significant effect on all evaluation indices (all P>0.05). Moreover, the interaction between sex and blood pressure factors also had no significant effect on all evaluation indices (all P>0.05). These results showed that blood pressure has significant effect on the change of wave reflection when using the recently developed Gaussian fitting method, whereas sex has no significant effect. The results also suggested that the Gaussian fitting method could be used as a new approach for assessing the arterial wave reflection.     

赖氨酸特异性组蛋白去甲基化酶1与白血病的研究进展

表观遗传学是后基因组时代兴起的一门新学科,它使人们认识到包括DNA甲基化、组蛋白修饰、染色质重塑及非编码RNA调控在内的修饰也可以记载遗传信息;并且许多表观遗传改变是可逆的,对表观遗传修饰和调控的研究已成为生命科学的热点和发展前沿。2004年发现的赖氨酸特异性组蛋白去甲基化酶1(LSD1)是第一个真正意义上的组蛋白赖氨酸去甲基化酶,使人们认识到组蛋白甲基化是一个动态的过程,通过组蛋白甲基转移酶和去甲基化酶的相互作用,动态地调控基因转录的激活和抑制等生物学过程。这重新定义了组蛋白甲基化,同时也为进一步深入研究组蛋白修饰提供了新的途径。我们在此简要介绍LSD1的结构与功能、LSD1与白血病的关系,LSD1在白血病的发生和发展中发挥重要作用,是一个潜在的治疗白血病的靶基因。     

Finite Element Analysis of Minimal Invasive Transforaminal Lumbar Interbody Fusion

The purpose of our study is to develop and validate three-dimensional finite element models of transforaminal lumbar interbody fusion, and explore the most appropriate method of fixation and fusion by comparing biomechanical characteristics of different fixation method. We developed four fusion models: bilateral pedicle screws fixation with a single cage insertion model (A), bilateral pedicle screws fixation with two cages insertion model (B), unilateral pedicle screws fixation with a single cage insertion model (C), and unilateral pedicle screws fixation with two cages insertion model (D); the models were subjected to different forces including anterior bending, posterior extension, left bending, right bending, rotation, and axial compressive. The von Mises stress of the fusion segments on the pedicle screw and cages was recorded. Angular variation and stress of pedicle screw and cage were compared. There were differences of Von Mises peak stress among four models, but were within the range of maximum force. The angular variation in A, B, C, and D decreased significantly compared with normal. There was no significant difference of angular variation between A and B, and C and D. Bilateral pedicle screws fixation had more superior biomechanics than unilateral pedicle screws fixation. In conclusion, the lumbar interbody fusion models were established using varying fixation methods, and the results verified that unilateral pedicle screws fixation with a single cage could meet the stability demand in minimal invasive transforaminal interbody fusion.     

LPS/Bcl3/YAP1 signaling promotes Sox9+HNF4α+ hepatocyte-mediated liver regeneration after hepatectomy

Recent reports have demonstrated that Sox9⁺HNF4α⁺ hepatocytes are involved in liver regeneration after chronic liver injury; however, little is known about the origin of Sox9⁺HNF4α⁺ hepatocytes and the regulatory mechanism. Employing a combination of chimeric lineage tracing, immunofluorescence, and immunohistochemistry, we demonstrate that Sox9⁺HNF4α⁺ hepatocytes, generated by transition from mature hepatocytes, play an important role in the initial phase after partial hepatectomy (PHx). Additionally, knocking down the expression of Sox9 suppresses hepatocyte proliferation and blocks the recovery of lost hepatic tissue. In vitro and in vivo assays demonstrated that Bcl3, activated by LPS, promotes hepatocyte conversion and liver regeneration. Mechanistically, Bcl3 forms a complex with and deubiquitinates YAP1 and further induces YAP1 to translocate into the nucleus, resulting in Sox9 upregulation and mature hepatocyte conversion. We demonstrate that Bcl3 promotes Sox9⁺HNF4α⁺ hepatocytes to participate in liver regeneration, and might therefore be a potential target for enhancing regeneration after liver injury.Subject terms: Ubiquitylation, Transdifferentiation, NF-kappaB, Regeneration, Stem-cell research     

A novel support vector regression model to estimate the phycocyanin concentration in turbid inland waters from hyperspectral reflectance

This study develops a novel support vector regression (SVR) model for retrieving the specific cyanobacterial pigment C-phycocyanin (C-PC) concentrations in cyanobacteria-dominated large turbid lakes of China. Lake Taihu, Lake Chaohu, and Lake Dianchi in China were our study areas. Five field cruises were carried out to collect data sets of optical and water quality parameters. To retrieve the C-PC, three types of reflectance forms, including single band, band ratio, and three-band-combination, were compared. The band ratio was the best candidate to serve for algorithm development. On this basis, two types of models, including linear models and a SVR model, were originally established. The previous typical algorithms were also examined. The obtained results showed that the best-performing model was the SVR model. By our validation data set, the proposed SVR model also presented accurate prediction results, with the lowest errors among all methods. The novelty of the SVR model compared to the previous ones lies in the inclusion of band ratios that are located outside of the main pigment absorption peaks but hold information on inflection points, curvature, etc., into empirical optimization. The implications of these findings indicates the potential applicability of the SVR models in lakes of the similar type.