Validation of a high-performance liquid chromatographic assay for the quantification of adenovirus type 5 particles

An anion-exchange–high-performance liquid chromatography (AE–HPLC) method for the quantification of adenovirus type 5 (Ad5) total particles was validated according to performance criteria of precision, specificity, linearity of calibration and range, limit of detection, limit of quantification, accuracy and recovery. The viral particles were detected by absorbance at 260 nm using photodiode array detector (PDA). Cesium chloride (CsCl) purified Ad5 and lysate samples were used for the validation of the method. Relative standard deviations (RSDs) for the inter-day, intra-day precision and reproducibility for both the lysate and the Ad5 standard were less than 10 and 2% for the peak area and retention time, respectively. The method was specific for Ad5 which was eluted at 8.0 min. The presence of DNA does not affect the recovery of Ad5 particles for accurate quantification. Based on the error in prediction to be less than 10%, the working range was established between 2×10¹⁰ and 7×10¹¹ VP/ml with correlation coefficient of 0.99975, standard deviation of 6.14×10⁹ VP/ml and a slope of 3.04×10⁵ VP/ml. The recovery of the method varied between 88 and 106% in all of the lysate samples investigated which is statistically similar to 100% recovery at 95% confidence interval.     

Uptake and translocation of zinc absorbed through roots and fruiting organs in peanuts

Peanut plants (Arachis hypogaea L.) are known to absorb Ca, P and S through the fruiting organs, but information on Zn uptake pattern is lacking. Therefore, a green-house experiment was conducted to study the uptake and translocation of Zn when applied in the rooting and fruiting zones of peanut plants. To locate the pathway and distribution of radioactive Zn, autoradiographs of plants were also taken.Zinc uptake data and autoradiographs indicated that a substantial amount of⁶⁵Zn was absorbed through the fruiting organs (auxillary system). Of the total⁶⁵Zn in the whole plant, 55.2 per cent was absorbed through roots and remaining 44.8 per cent through fruiting organs. Zinc was translocated to all the plant parts regardless of its absorption through roots or fruiting organs. The highest zinc concentration was recorded in the kernels, followed by leaves, stem and the shell.Contribution from the Department of Soils, Haryana Agric. Univ., Hissar-India.     

Limitations of conventional regression analysis a proposed modification

Summary The conventional genotype-environment interaction analysis cannot detect the theoretically ideal genotype which has been defined as the one with relatively low sensitivity in the poor environments and high sensitivity in the favourable environments. The computation of separate regression coefficients on the two regions of the response curve has been suggested to detect such genotypes. This procedure is simple and more convenient than the complicated curvilinear regression analysis.     

Repeatability of stability estimators for downy mildew incidence in pearl millet

Summary Repeatability of mean downy mildew (Sclerospora graminicola (Sacc.) Schroet.) incidence, regression coefficients and deviation mean squares were investigated for 25 pearl millet (Pennisetum typhoides (Burm.) Stapf. & Hubb.) genotypes in 20 environments by correlating arrays of these stability parameters over subsets of the 20 environments arranged according to the year-wise, random, stratified and extreme methods of environmental division. Correlation coefficients between arrays of mean downy mildew incidence from different pairs of subsets ranged from 0.57 to 0.98 and those of deviation mean squares from 0.58 to 0.96 indicating good repeatability of these parameters. Arrays of regression coefficients from different subsets, on the other hand, showed correlation coefficients that ranged from –0.58 to 0.96. Apparently, the regression index of stability was not repeatable for the genotypes and environments studied. Therefore, in order to identify a widely adapted genotype, testing is required to be carried out over a wider range of environments.     

Degradation of Alachlor [2-chloro-N-(methoxymethyl)-2′,6′-diethylacetanilide] by soil fungi

Summary A Penicillium sp. and a Trichoderma sp. were isolated from a soil previously treated with alachlor which is commonly used as herbicide. These fungi were found to degrade alachlor and only one degradation product was observed after 15 days of incubation. Whereas two products were noticed after 30 days with both the test organisms. re]19740913     

Evaluation of commercial soil health tests using a medium-term cover crop experiment in a humid,temperate climate

Plant and Soil - Microbial-driven biogeochemical cycles of phosphorus (P) in wetlands subjected to global climate warming result in a downstream eutrophication risk. However, how warming influences...     

Transient Gene Expression in Serum-Free Suspension-Growing Mammalian Cells for the Production of Foot-and-Mouth Disease Virus Empty Capsids

Foot-and-mouth disease (FMD) is a highly contagious disease of cloven-hoofed animals. It produces severe economic losses in the livestock industry. Currently available vaccines are based on inactivated FMD virus (FMDV). The use of empty capsids as a subunit vaccine has been reported to be a promising candidate because it avoids the use of virus in the vaccine production and conserves the conformational epitopes of the virus. In this report, we explored transient gene expression (TGE) in serum-free suspension-growing mammalian cells for the production of FMDV recombinant empty capsids as a subunit vaccine. The recombinant proteins produced, assembled into empty capsids and induced protective immune response against viral challenge in mice. Furthermore, they were recognized by anti-FMDV bovine sera. By using this technology, we were able to achieve expression levels that are compatible with the development of a vaccine. Thus, TGE of mammalian cells is an easy to perform, scalable and cost-effective technology for the production of a recombinant subunit vaccine against FMDV.     

Correlated Changes in Body Melanisation and Mating Traits of Drosophila melanogaster: A Seasonal Analysis

Altitudinal localities of the northern India are associated with high seasonal changes. Drosophila melanogaster flies are darker during the winter season as compared to the autumn season. We tested the hypothesis whether there are altitudinal clines for mating related traits. We observed negative cline for mating latency and positive for copulation period along altitude in D. melanogaster. We further tested if seasonally varying body melanisation is correlated with mating propensity in D. melanogaster. Thus, we examined the D. melanogaster flies collected during autumn and winter season for changes in body melanisation and mating-related traits. Flies from the winter season show high melanisation, copulation duration and fecundity/day as compared to the autumn season flies. By contrast mating latency is longer during autumn as compared to winter season. Based on within- and between-population analysis, body melanisation shows positive correlation with copulation duration and fecundity/day, while negative correlation with mating latency. Within-population analyses show no correlation between body size and ovariole number with body melanisation. Thus, our data suggest that seasonal changes in body melanisation are correlated with mating latency, copulation duration and fecundity/day, but no correlation with body size and ovariole numbers. Further, we observed that seasonal changes in these clines, although have some component of plasticity, have strong genetic basis as the seasonal and population differences were maintained for various traits after 8 generations in the laboratory.     

Shifting clinal patterns of stress resistance traits in Drosophila ananassae

Drosophila ananassae, a desiccation and cold sensitive species, is abundant along the latitudinal gradient of the Indian subcontinent. Analysis of seasonally varying wild-caught flies showed two independent patterns of melanisation: (1) narrow to broad melanic stripes on three anterior abdominal segments only; (2) a novel body color pattern (dark vs. light background). We investigated the degree to which these two melanisation systems vary; first with latitude and secondly among seasons. There is a shallow latitudinal cline for percent striped melanisation as well as for frequency of body color alleles during the rainy season. The frequencies of body color alleles vary significantly across seasons in the northern populations i.e. the light allele occur abundantly (>0.94) during the rainy season while the frequency of the dark allele increases (0.22–0.35) during the dry season causing steeper clines during the dry season. By contrast, the low variations in abdominal stripes showed non-significant changes and the cline was similar across seasons. Furthermore, both types of melanisation patterns showed no plasticity with respect to temperature. The present study also investigated clines related to desiccation, heat and cold stress in D. ananassae females across seasons (rainy and dry) from nine latitudinal populations. The clines for stress related traits changes to steeper and non-linear during the dry season. Thus, latitudinal populations of D. ananassae differ in slope values of clines for stress related traits across seasons. This study reports seasonal changes in latitudinal clines of stress resistance traits as seen in a changing frequency of body color alleles of D. ananassae in northern locality, while in southern localities it remains constant. This is presumably the result of only minor seasonal changes in humidity and temperature in the South, whereas in the North seasonal climatic variability is much higher.