Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates

Linking variation in quantitative traits to variation in the genome is an important, but challenging task in the study of life-history evolution. Linkage maps provide a valuable tool for the unravelling of such trait−gene associations. Moreover, they give insight into recombination landscapes and between-species karyotype evolution. Here we used genotype data, generated from a 10k single-nucleotide polymorphism (SNP) chip, of over 2000 individuals to produce high-density linkage maps of the great tit (Parus major), a passerine bird that serves as a model species for ecological and evolutionary questions. We created independent maps from two distinct populations: a captive F2-cross from The Netherlands (NL) and a wild population from the United Kingdom (UK). The two maps contained 6554 SNPs in 32 linkage groups, spanning 2010 cM and 1917 cM for the NL and UK populations, respectively, and were similar in size and marker order. Subtle levels of heterochiasmy within and between chromosomes were remarkably consistent between the populations, suggesting that the local departures from sex-equal recombination rates have evolved. This key and surprising result would have been impossible to detect if only one population was mapped. A comparison with zebra finch Taeniopygia guttata, chicken Gallus gallus and the green anole lizard Anolis carolinensis genomes provided further insight into the evolution of avian karyotypes.     

Environmental constraints at the edge of a species distribution, the Eurasian badger (Meles meles L.): a biogeographic approach

Aim This paper describes the distribution pattern (occurrence) of badgers (Meles meles L. 1758) in a Mediterranean mountain area of central Spain, in relation to landscape characteristics and climatic data. We test the fit of the badger occurrence pattern to the niche hypothesis predictions. Location We sampled twenty-four survey plots randomly distributed in the mountains of central Spain (Sierra de Guadarrama, Madrid): ten in the north and fourteen in the south slopes. All habitat types and climatic conditions typical of central Spain can be found. Methods The ocurrence of badgers in the plots were recorded through an exhaustive search of setts and latrines in four different (and evenly spaced) points in each plot. The index of occurrence was made by dividing the number of positive points (badger presence) by the total number of points sampled (four in all plots). Landscape patterns (% type of habitat in each plot) were obtained from detailed maps and climate data from meteorological stations placed in the plot. We analyse the contribution of landscape variables and climate data to explain the differences in badger occurrence through Pearson correlations and fixed one-way ANCOVA with climatic data as fixed factor, vegetation cover as covariates and badger occurrence as response variable. Additionally, we use an one-way ANOVA to check the differences in occurrence between north and south plots with the location of each plot as fixed factor. Results The results indicate that the badger is more abundant in rainy areas of the mountains, and in open landscapes vegetated by ash-tree forests than in closed landscapes vegetated by holm oak forests. In addition, the species is more abundant in the northern plots than in the southern ones. Northern plots were homogeneous areas characterized by their open landscape and wet climate, while southern plots were characterized by their dry climate and closed landscapes. In addition, climate (measured as summer rain) is more determinant than habitat type (holm oak cover) to explain the pattern of badger occurrence. Main conclusions Overall, we consider that the typical Mediterranean landscapes are poor habitats for badgers due to changes in the environmental conditions associated with concomitant changes in food resources. These data support the niche hypothesis to explain the changes in abundance or occurrence close to the edge of the distribution of species, and in particular, in Palearctic species in the Mediterranean area.     

Importance of scrub–pastureland mosaics for wild-living cats occurrence in a Mediterranean area: implications for the conservation of the wildcat (Felis silvestris)

The European wildcat (Felis silvestris) is a threatened species in Europe. Suitable management of forests has been considered crucial for its conservation in Europe. However, this recommendation may not be general due to the lack of studies that test these hypotheses in the Mediterranean area, where landscapes are very different from those of central-north Europe. In this study, wild-living cat habitat associations were analyzed by means of scat surveys in 78 areas distributed in the four main vegetation types of the Mediterranean area of central Spain, where feral cat populations are probably scarce and restricted. Results show higher occurrences of wild-living cats in landscapes covered by scrub–pastureland mosaics rather than forests. Several applied recommendations are given: (1) to include the scrub–pastureland mosaics as protected habitats for wildcats; (2) to encourage further studies about the importance of this habitat in other areas; (3) to avoid the extensive scrubland removal associated with management practices against fires or infrastructure development; and (4) to promote land management practices that enhance these mosaics, and to use shrub species in the reforestation programmes founded by the European Agricultural Policy.     

Nitrogen deposition and greenhouse gas emissions from grasslands: uncertainties and future directions

Increases in atmospheric nitrogen deposition (N_dep) can strongly affect the greenhouse gas (GHG; CO₂, CH₄, and N₂O) sink capacity of grasslands as well as other terrestrial ecosystems. Robust predictions of the net GHG sink strength of grasslands depend on how experimental N loads compare to projected N_dep rates, and how accurately the relationship between GHG fluxes and N_dep is characterized. A literature review revealed that the vast majority of experimental N loads were higher than levels these ecosystems are predicted to experience in the future. Using a process‐based biogeochemical model, we predicted that low levels of N_dep either enhanced or reduced the net GHG sink strength of most grasslands, but as experimental N loads continued to increase, grasslands transitioned to a N saturation‐decline stage, where the sensitivity of GHG exchange to further increases in N_dep declined. Most published studies represented treatments well into the N saturation‐decline stage. Our model results predict that the responses of GHG fluxes to N are highly nonlinear and that the N saturation thresholds for GHGs varied greatly among grasslands and with fire management. We predict that during the 21st century some grasslands will be in the N limitation stage where others will transition into the N saturation‐decline stage. The linear relationship between GHG sink strength and N load assumed by most studies can overestimate or underestimate predictions of the net GHG sink strength of grasslands depending on their N baseline status. The next generation of global change experiments should be designed at multiple N loads consistent with future N_dep rates to improve our empirical understanding and predictive ability.     

Transglutaminase-catalyzed incorporation of [2,5-3H]histamine into a Mr 84000 particulate protein in pancreatic islets

Rat pancreatic islet homogenates catalyze the incorporation of [2,5^–3-H]histamine into endogenous proteins recovered in both the stacking gel and a Mr 84000 protein separated by polyacrylamide electrophoresis. The labelling of these proteins represents a Ca²⁺-dependent process inhibited by glycine methylester, but not sarcosine methylester, and enhanced after preincubation of the islets at a high concentration of D-glucose. Although transglutaminase activity is found in both soluble and particlate subcelluler fractions, the endogenous transglutaminase substrates were located mainly in paarticulate, possibly membrane-associated, material.     

Autonomic neuropathy in Fabry disease: a prospective study using the Autonomic Symptom Profile and cardiovascular autonomic function tests

Background  

Fabry patients have symptoms and signs compatible with autonomic dysfunction. These symptoms and signs are considered to be due to impairment of the peripheral nervous system, but findings indicative of autonomic neuropathy in other diseases, such as orthostatic intolerance and male sexual dysfunction, are infrequently reported in Fabry disease. The aim of our study was to investigate autonomic symptoms and cardiovascular autonomic function in a large cohort of male and female Fabry patients.