南亚热带常绿阔叶林5种壳斗科植物碳氮磷化学计量特征

壳斗科(Fagaceae)植物是南亚热带常绿阔叶最重要的组成之一,研究其不同树种和器官间碳(C)、氮(N)、磷(P)含量及计量学特征,对于理解和预测树木生态功能的发挥至关重要。以阴那山省级自然保护区同一森林群落中5种壳斗科植物为研究对象,探讨不同树种及器官间C、N、P含量、化学计量及其相关关系特征。结果表明:(1)器官、树种对植物C、N、P含量及化学计量比均会产生一定影响,二者交互作用显著(除C含量),限制程度为器官>树种。(2)从含量上看,5种壳斗科植物凋落物N普遍高于茎、根,而凋落物P则普遍低于茎、根,幼苗叶片N、P含量均低于成熟乔木叶片;黧蒴锥(Castanopsis fissa)根N、N ∶ P高于其他树种,而根P则低于其他树种。(3)从种间变异系数上看,根系N、C ∶ N、N ∶ P变异系数显著高于其他器官;从器官间变异系数上看,黧蒴锥N、C ∶ N变异系数显著低于其他树种。(4)从树种间和器官间的养分相关关系上看,5种植物绝大部分器官元素间两两相关关系不显著,表明单一器官的养分计量关系不能直接反映其他器官或整树水平的计量关系;器官间C和N、C和P相关关系因树种而异,但N和P关系各树种高度一致。综上,从器官上看,根系N含量、C ∶ N、N ∶ P的种间变异系数最大,可能是不同树种对N、P的吸收存在差异,从而有利于物种共存。从树种上看,黧蒴锥具有更合理的养分分配模式,有利于在群落竞争中保持优势地位。     

中国禾本科植物内生真菌研究4.Epichlo(e) yangzii的人工杂交

作者首先研究Epichloe yangzii植株上的人工杂交,明确了供试菌株的交配型.然后将分离自无子座鹅观草属植物的23株"Neotvphodium属"真菌孢子分别与E.yangzii的子座杂交,其中发现有21株与E yangzii(mat-1,mat-2)杂交不亲和,有2株与E yangzii(mat-1)杂交亲和.利用tubB基因片段对8株"Neotyphodium属"真菌菌株进行系统发育分析,结果表明与E yangzii杂交亲和的2个菌株和E.yangzii聚为一枝,而其它6个菌株形成独立的分枝,进一步证实了这2个菌株足有时在宿主植物上不形成子座的Eyangzii.这说明了在宿主植物上的人工杂交是区别有时不产子座的E yangzii和Neotyphodium属真菌的有效手段.     

Long noncoding RNA lncMREF promotes myogenic differentiation and muscle regeneration by interacting with the Smarca5/p300 complex

Long noncoding RNAs (lncRNAs) play important roles in the spatial and temporal regulation of muscle development and regeneration. Nevertheless, the determination of their biological functions and mechanisms underlying muscle regeneration remains challenging. Here, we identified a lncRNA named lncMREF (lncRNA muscle regeneration enhancement factor) as a conserved positive regulator of muscle regeneration among mice, pigs and humans. Functional studies demonstrated that lncMREF, which is mainly expressed in differentiated muscle satellite cells, promotes myogenic differentiation and muscle regeneration. Mechanistically, lncMREF interacts with Smarca5 to promote chromatin accessibility when muscle satellite cells are activated and start to differentiate, thereby facilitating genomic binding of p300/CBP/H3K27ac to upregulate the expression of myogenic regulators, such as MyoD and cell differentiation. Our results unravel a novel temporal-specific epigenetic regulation during muscle regeneration and reveal that lncMREF/Smarca5-mediated epigenetic programming is responsible for muscle cell differentiation, which provides new insights into the regulatory mechanism of muscle regeneration.     

DNASE1L3 inhibits proliferation,invasion and metastasis of hepatocellular carcinoma by interacting with β‐catenin to promote its ubiquitin degradation pathway

As a member of the deoxyribonuclease 1 family, DNASE1L3 plays a significant role both inside and outside the cell. However, the role of DNASE1L3 in hepatocellular carcinoma (HCC) and its molecular basis remains to be further investigated. In this study, we report that DNASE1L3 is downregulated in clinical HCC samples and evaluate the relationship between its expression and HCC clinical features. In vivo and in vitro experiments showed that DNASE1L3 negatively regulates the proliferation, invasion and metastasis of HCC cells. Mechanistic studies showed that DNASE1L3 recruits components of the cytoplasmic β‐catenin destruction complex (GSK‐3β and Axin), promotes the ubiquitination degradation of β‐catenin, and inhibits its nuclear transfer, thus, decreasing c‐Myc, P21 and P27 level. Ultimately, cell cycle and EMT signals are restrained. In general, this study provides new insight into the mechanism for HCC and suggests that DNASE1L3 can become a considerable target for HCC.

Decreased expression of DNASE1L3 is associated with poor prognosis in patients with HCC DNASE1L3 inhibits the proliferation and cell cycle of HCC cells in vitro and promotes the invasion and metastasis of HCC cells DNASE1L3 inhibits the tumorigenicity and metastasis of HCC cells in vivo DNASE1L3 interacts with β‐catenin and promotes its binding to the β‐catenin destroying complex DNASE1L3 interacts with P21 and stabilizes P21 by mediating the deubiquitin activity     

A multi-label learning model for predicting drug-induced pathology in multi-organ based on toxicogenomics data

Drug-induced toxicity damages the health and is one of the key factors causing drug withdrawal from the market. It is of great significance to identify drug-induced target-organ toxicity, especially the detailed pathological findings, which are crucial for toxicity assessment, in the early stage of drug development process. A large variety of studies have devoted to identify drug toxicity. However, most of them are limited to single organ or only binary toxicity. Here we proposed a novel multi-label learning model named Att-RethinkNet, for predicting drug-induced pathological findings targeted on liver and kidney based on toxicogenomics data. The Att-RethinkNet is equipped with a memory structure and can effectively use the label association information. Besides, attention mechanism is embedded to focus on the important features and obtain better feature presentation. Our Att-RethinkNet is applicable in multiple organs and takes account the compound type, dose, and administration time, so it is more comprehensive and generalized. And more importantly, it predicts multiple pathological findings at the same time, instead of predicting each pathology separately as the previous model did. To demonstrate the effectiveness of the proposed model, we compared the proposed method with a series of state-of-the-arts methods. Our model shows competitive performance and can predict potential hepatotoxicity and nephrotoxicity in a more accurate and reliable way. The implementation of the proposed method is available at https://github.com/RanSuLab/Drug-Toxicity-Prediction-MultiLabel.     

大熊猫国家公园四川片区自然保护地空间关系对大熊猫分布的影响

理清自然保护地的空间关系与分布格局是加强空间管控、整合优化自然保护地体系的基础。以大熊猫国家公园四川片区内的自然保护地为案例,基于ArcGIS空间数据的处理、分析与可视化表达等功能,结合韦恩(Venn)图在空间层面上量化分析了公园范围内各类自然保护地的空间关系,并进一步揭示了不同保护情景下大熊猫(Ailuropoda melanoleuca)的分布格局。研究结果表明:(1)研究区内含有6类自然保护地,占研究区总面积的75.13%,其中40.68%为交叉重叠区域。(2)各类自然保护地皆存在大面积的交叉重叠。自然保护区为研究区面积最大的自然保护地类型,占自然保护地总面积的72.53%,其中45.89%为交叉重叠区域;其他类自然保护地占自然保护地总面积的60.87%,其中66.48%为交叉重叠区域。(3)猫点密度与自然保护地的交叉重叠程度呈现逆向增长趋势,区域的重叠水平越高,猫点密度越低。(4)自然保护地整体非重叠区的猫点密度高于重叠区。自然保护区是整体猫点密度最高的自然保护地类型,其非重叠区密度明显高于重叠区;森林公园非重叠区与水利风景区重叠区呈现较高的猫点密度。(5)与自然保护区交叉重叠...     

A baseline epidemiological study of the co-infection of enteric protozoans with human immunodeficiency virus among men who have sex with men from Northeast China

BackgroundHuman immunodeficiency virus (HIV) and enteric parasite co-infection not only aggravates the clinical symptoms of parasites but also accelerates acquired immunodeficiency syndrome (AIDS) progression. However, co-infection research on men who have sex with men (MSM), the predominant high-risk population of HIV/AIDS in China, is still limited. In this study, we investigated the epidemiology of enteric parasites, risk factors, and associations with clinical significance in an MSM HIV/AIDS population in Heilongjiang Province, northeast China.MethodsWe recruited 308 MSMs HIV/AIDS patients and 199 HIV-negative individuals in two designated AIDS hospitals in Heilongjiang between April 2016 and July 2017. Fresh stool samples were collected. DNA extraction, molecular identification, and genotyping of Cryptosporidium species, Entamoeba histolytica, Cyclospora cayetanensis, Enterocytozoon bieneusi, and Blastocystis hominis were performed. Fourteen diarrhea-related pathogens were examined to exclude the influence of other bacterial pathogens on diarrhea incidence.Results31.5% of MSM HIV/AIDS participants were infected with at least one parasite species, a significantly higher proportion than that found in the HIV-negative individuals (2.5%). E. bieneusi presented the highest prevalence, followed by B. hominis, E. histolytica, Cryptosporidium spp., and C. cayetanensis. Warm seasons were the risk factor for parasitic infections in this population [odds ratio (OR) = 2.6, 95% CI: 1.47–4.57]. In addition, these individuals showed a higher proportion (35.8%) of present diarrhea (PD) compared with men who have sex with women (MSW) with HIV/AIDS (16.7%). The infection proportions of both Cryptosporidium spp. and E. histolytica were significantly higher in the PD. E. bieneusi infection was more prevalent in the historic diarrhea (HD) group. CD4⁺ T cell counts in the MSM patients with the above three parasites were significantly lower. New species and genotypes were found, and MSM patients had a wider range of species or genotypes.ConclusionsEnteric parasitic infection was prevalent in the MSM HIV/AIDS population, especially in patients with present diarrhea during warm seasons. E. histolytica and B. hominis should also be considered high-risk parasites for opportunistic infections in AIDS patients in addition to Cryptosporidium spp.     

Exosomal lncRNA-p21 derived from mesenchymal stem cells protects epithelial cells during LPS-induced acute lung injury by sponging miR-181

Long noncoding RNAs(IncRNAs)act as essential regulators of various diseases.However,the func-tions of IncRNAs in sepsis-induced acute lung injury(SALI)remain un...