The incidence of viruses in wild Brassica rapa ssp. sylvestris in southern England

Using enzyme‐linked immunosorbent assays, the frequency of occurrence of six viruses was determined in Brassica rapa ssp. sylvestris collected from two Thameside sites (Abingdon and Culham) in Oxfordshire and one near the Avon (Claverton) in Bath & North East Somerset. During 2000–2001, the viruses detected were: Beet western yellows virus (genus Polerovirus) (BWYV), Cauliflower mosaic virus (genus Caulimovirus) (CaMV), Turnip crinkle virus (genus Carmovirus) (TCV), Turnip rosette virus (genus Sobemovirus) (TRoV), and Turnip yellow mosaic virus (genus Tymovirus) (TYMV). BWYV and TYMV were the most frequently detected viruses at the Oxford shire sites, both as single infections (20/1743 and 66/1743 respectively) and as dual infections (7/1743). Turnip mosaic virus (genus Potyvirus) (TuMV) was not detected in the field‐grown plants assayed from any of the sites. There was a highly significant (x²_[1]=30.07, P<0.001) difference in the proportion of plants at each Oxfordshire site in which one or more viruses were detected, and essentially the same pattern of virus infection was observed in tests on B. rapa from the site near Claverton. At least one representative isolate of each detected virus was tested for its morphological and serological effects on glasshouse‐grown individuals from different half‐sib families of B. rapa from both Oxfordshire sites. Except for TRoV, where there was a large difference in the frequency of successful infection in B. rapa from the two locations (1/15 vs 11/15), no clear evidence of resistance or immunity to challenge was observed, although tolerance (virus invasion without symptoms) was frequent. Fewer of the plants from Abingdon were infected than those from Culham, when mechanically challenged with TRoV, but the two B. rapa populations were not otherwise consistently different, either in their infectibility by this virus or in their responses to challenge. However, with TCV, viral antigen concentration was closely linked to the severity of disease and the B. rapa from both Oxfordshire sites segregated into two classes: those with symptoms and most viral antigen, and those without symptoms and least viral antigen. These results suggest that generic risk assessments cannot be made due to differences in the way distinct B. rapa populations react to virus challenge.     

Responses of zooplankton and zoobenthos to experimental acidification in a high-elevation lake (Sierra Nevada, California, U.S.A.)

SUMMARY. 1. During the summer of 1987 we conducted an acidification experiment using large enclosure at Emerald Lake, a dilute, high-elevation lake in the Sierra Nevada, California, U.S.A. The experiment was designed to examine the effects of acidification on the zooplankton and zoobenthos assemblages of Sierran lakes.
2. Treatments consisted of a control (pH 6.3) and pH levels of 5.8, 5.4, 5.3, 5.0 and 4.7; each treatment was run in triplicate. The experiment lasted 35 days.
3. The zooplankton assemblage was sensitive to acidification. Daphnia rosea Sars emend. Richard and Diaptomns signicauda Lilljeborg decreased in abundance below pH 5.5–5.8, and virtually disappeared below pH 5.0. Bosmina longirostris (Müller) and Keratella taurocephala Ahlstrom became more abundant with decreasing pH. although B. longirostris was rare in the pH 4.7 treatment. These species might serve as reliable indicators of early acidification in lakes such as Emerald Lake.
4. The elimination of D. rosea in acidified treatments probably allowed the more acid-tolerant taxa to increase in abundance because interspecific competition was reduced. Even slight acidification can therefore alter the structure of the zooplankton assemblage.
5. In contrast to the zooplankton, there was no evidence that the zoobenthos in the enclosures was affected by acidification.     

Ultrastructural changes in leaf cells of poplar naturally infected with poplar mosaic virus

In poplar (Populus x euramericana cv. Robusta) infected with poplar mosaic virus, rod-shaped, virus-like particles (c. 13 nm in diameter) occurred singly or in loose bundles in the cytoplasm of cells in palisade and mesophyll tissue and in vascular parenchyma. The cell walls had local overgrowths consisting of membranous elements (vesicles and/or tubules) in a loosely fibrillar matrix. Accumulations of endoplasmic reticulum with enlarged cisternae occurred near cell nuclei. We are indebted to Mr A. G. Mackay, Bryant and May (Forestry Ltd) for supplying the poplar material and we acknowledge technical assistance from Mrs D. McCall. The work was supported financially by the Natural Environment Research Council.     

Heat inactivation of cucumber mosaic virus in cultured tissues of Stellaria media

In vivo heat inactivation of cucumber mosaic virus (CMV) was studied in a low-temperature-tolerant species, Stellaria media. Infectivity remained high in infected 5. media cultures grown at 25 °C or less, but could not be detected in cultures incubated at 32 °C for 28 days. When infected tissues were grown at 12–32 °C for 24 days, virus was still detectable at a low level in cultures incubated at 30 °C. The highest level of infectivity was in cultures at 12 °C.     

The prevalence and spatial distribution of viruses in natural populations of Brassica oleracea

We report a survey of four viruses (beet western yellows luteovirus (BWYV), cauliflower mosaic caulimovirus (CaMV), turnip mosaic potyvirus (TuMV), turnip yellow mosaic tymovirus (TYMV)) in five natural populations of Brassica oleracea in Dorset (UK). All four viruses were common; 43% of plants were infected with BWYV, 60% with CaMV, 43% with TuMV and 18% with TYMV. For each virus there were significant differences in the proportion of infected plants among populations, which were not completely explained by differences in the age of plants. Multiple virus infections were prevalent, with 54% of plants having two or more virus types. There were statistically significant associations between pairs of viruses. The CaMV was positively associated with the other three viruses, and BWYV was also positively associated with TuMV. There was no detectable association between BWYV and TYMV, whereas TuMV and TYMV were negatively associated. We suggest these associations result from BWYV, CaMV and TuMV having aphid vectors in common, as aphids are attracted to plants that already have a virus infection. Infected plants were distributed randomly or were very weakly aggregated within populations. The implications of widespread multiple virus infections in natural plant populations are discussed with respect to the release of transgenic plants expressing virus-derived genes.     

Optimal time to emerge from refuge

Factors affecting emergence by prey that enter refuges when approached by predators have been studied intensively, but only two theoretical models predict how long prey should remain in a refuge before emerging. We argue that prey can make better decisions than allowed by one model; the other model describes cases in which predators wait for prey to emerge. We present optimality models that permit prey to select a time to emerge that maximizes fitness. When in a refuge, a prey cannot obtain benefits outside; emerging too soon can be catastrophic, but delaying emergence entails loss of fitness. If predators resume foraging quickly rather than engaging in strategic waiting games, current theory suggests that prey emerge when the costs of remaining in a refuge and of emerging are equal. However, prey often can do better by emerging at the time maximizing fitness rather than when benefits equal costs (i.e. when prey break even). Optimal emergence time depends on initial fitness, benefits lost by remaining in refuge, and the decay rate of predation risk. Benefits lost if a prey is killed are modelled separately from benefits that contribute to lifetime fitness, even if the prey is killed (individual reproduction, altruism). Fitness of prey emerging at the optimal emergence time may be greater than, equal to or less than initial fitness. Break-even and optimality models base predictions on the opposing effects of risk and loss of benefits. Thus, many empirically verified predictions are identical at the ordinal level although differing quantitatively. Optimality models provide novel testable predictions for the effects of initial fitness, benefits, and, for ectotherms, the rate of cooling in refuge. They predict earlier emergence for equal retainable benefits than for those lost upon death.  © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 91 , 375–382.