Trophic structure of macroinvertebrates in Amazonian streams impacted by anthropogenic siltation

This study assessed the results of anthropogenic sediment input on macroinvertebrate trophic structure in streams located in an area of oil and natural gas exploitation in Brazil's Amazon forest. The results indicate that macroinvertebrate communities both in streams impacted by anthropogenic sediments and in non‐impacted streams are composed mainly of taxa in the following functional feeding groups: predators, gathering‐collectors, scrapers, shredders and filtering‐collectors. The highest densities were observed for collector‐gatherers, followed by scrapers, predators, shredders and filtering‐collectors. However, both the richness and the density of all groups were reduced in impacted streams. The reductions were significantly related to suspended inorganic sediment load and to the colour of suspended sediments. The relative proportion of shredders in streams impacted by anthropogenic sediments was significantly reduced as compared with the proportion observed in non‐impacted streams. This resulted from lower availability of coarse particulate organic matter in these streams owing to burial of leaves and other plant material. These results indicate changes in the functioning and productivity of streams owing to anthropogenic siltation. This is because the benthic macroinvertebrate communities, sampled during this study, were dependent on the degradation of leaves, which are the primary energy source sustaining the benthic foodweb.     

Drought tolerance of two black poplar (Populus nigra L.) clones: contribution of carbohydrates and oxidative stress defence

Drought is expected to become an increasingly important factor limiting tree growth caused by climate change. Two divergent clones of Populus nigra (58-861 and Poli) originating from contrasting environments were subjected to water limitation (WL) to elucidate whether they differ in tolerance to drought, which mechanisms to avoid stress they exhibit and whether drought has an impact on the interactions between roots and shoots. Limiting water availability caused photosynthetic rate and total non-structural carbohydrate (TNC) levels to decrease in 58-861. However, starch-degrading enzyme activity and gene expression were induced in roots, and soluble sugar levels were higher than in well-watered (WW) plants. These data suggest that assimilation and partitioning of carbon to the roots are decreased, resulting in mobilization of stored starch. In contrast, the photosynthetic rate of Poli was reduced only late in the treatment, and carbohydrate levels in WL plants were higher than in WW plants. Superoxide dismutase (SOD) activity and gene expression were higher in Poli than in 58-861, even in WW plants, leading to a higher capacity to defend against oxidative stress.     

Identification and Characterization of Variants of Crithidia luciliae with Altered Morphological and Surface Properties

ABSTRACT. Variants of a cloned laboratory stock of the trypanosomatid parasite Crithidia luciliae have been distinguished from "parental type" organisms. These variants accumulated spontaneously over time as the protozoan was maintained by continuous passage in a chemically defined medium. Cloned lines of these variants have been isolated by plating on nutrient agar and partially characterized on the basis of their growth characteristics in culture, their colony and cellular morphology as well as their surface protein expression. One cloned line consisted of motile, flagellated forms which, unlike "parental type" organisms, did not adhere to the surface of culture flasks. Another cloned line was composed of non-adherent, nonmotile, amastigote-like forms which were further distinguished from "parental type" cells by virtue of their constitutive expression, in nutrient-replete medium, of high levels of a surface membrane associated 3'-nucleotidase/nuclease (3'-N'ase) activity. Both the motile, flagellated and amastigote-like variants, like the "parental type" organisms, exhibited elevated levels of the 3'-N'ase activity upon exposure to purine starvation conditions. The variants described are of potential importance in elucidating the mechanism of induction of the highly regulated 3'-N'ase activity as well as for understanding the cytoskeletal systems and the surface properties of these protozoa.     

Respiration‐induced weathering patterns of two endolithically growing lichens

The two endolithic lichen species Hymenelia prevostii and Hymenelia coerulea were investigated with regard to their thallus morphology and their effects on the surrounding substrate. The physiological processes responsible for the observed alterations of the rock were identified. Whereas the thallus surface of H. coerulea was level, H. prevostii formed small depressions that were deepest in the thallus center. In a cross‐section, both species revealed an algal zone consisting of algal cavities parallel to the substrate surface and a fungal zone below. However, H. prevostii revealed significantly larger cavities with more than twice the cell number and a denser pattern of cavities than H. coerulea, resulting in a biomass per surface area being more than twice as large. Below H. prevostii the layer of macroscopically visibly altered rock material was about twice as deep and within this layer, the depletion of calcium and manganese was considerably higher. In simultaneous measurements of the oxygen uptake/oxygen release and pH shift, the isolated algal strains of both lichens revealed respiration‐induced acidification of the medium in the dark. At higher light intensities, H. coerulea and to a lesser extent also H. prevostii alkalized the medium which may lessen the acidification effect somewhat under natural conditions. In a long‐term growth experiment, the isolated algal strains of both lichens revealed acidification of the medium to a similar extent. Neither acidic lichen substances nor oxalic acid was identified. The significant differences between the weathering patterns of both species are based on the same respiration‐induced acidification mechanism, with H. prevostii having a greater effect due to its higher biomass per area.     

Phylogenetic signal in the evolution of body colour and spicule skeleton in calcareous sponges

Some of the morphological characters used in Porifera taxonomy have often been shown to be inconsistent. In the present study, we tested the phylogenetic coherence of currently used taxonomic characters of the calcarean genus Clathrina. For this, 20 species of Clathrina and three other calcinean genera (Ascandra, Guancha, and Leucetta) were sequenced for the ITS and D2 region of the 28S ribosomal DNA. Maximum‐likelihood and maximum‐parsimony algorithms were used to reconstruct phylogenetic trees. Deep divergences were observed in our tree and Clathrina was shown to be paraphyletic. The major split in our topology showed a clear‐cut distinction between sponges with and without tetractine spicules. Moreover, a group of yellow‐coloured Clathrina was clearly separated from the remaining white‐coloured species. Our results show that the presence of diactines, water‐collecting tubes, the degree of cormus anastomosis, and actine shapes do not correlate with the major clades of the calcinean phylogeny. On the other hand, the presence of tripods, the absence of tetractines, and the presence of spines in the apical actine of tetractines seem to be good synapomorphies for clades in our tree. Our results demonstrate that skeleton characters can be reliably used in higher level taxonomy in Clathrinida. © 2011 The Linnean Society of London, Zoological Journal of the Linnean Society, 2011, 163 , 1026–1034.     

The Phlesirtes complex (Orthoptera,Tettigoniidae, Conocephalinae,Conocephalini) reviewed: integrating morphological,molecular, chromosomal and bioacoustic data

The tettigoniid genus Phlesirtes Bolivar and its allies are reviewed. Morphological, ecological and molecular data prompt the erection of the new genus Chortoscirtes gen.n. with type species Xiphidion meruense Sjöstedt. The genera Phlesirtes, Chortoscirtes, Karniella and Naskreckiella are characterized by morphological characters supported by molecular, acoustic, ecological and chromosomal data. Four species, Chortoscirtes pseudomeruensis sp.n. , C. masaicus sp.n. , C. puguensis sp.n. and C. serengeti sp.n. , are described from localities in northern and coastal Tanzania and one Karniella, K. crassicerca sp.n. , is described from Uganda. The following comb n. are proposed: Phlesirtes kibonotensis (Sjöstedt) and Phlesirtes kilimandjaricus (Sjöstedt). Subtribal status is proposed for the four investigated African genera. A key to the Chortoscirtes species is provided.     

Bodo sp., a Free-Living Flagellate, Expresses Divergent Proteolytic Activities from the Closely Related Parasitic Trypanosomatids

ABSTRACT. We report the characterization of cell-associated and extracellular peptidases of Bodo sp., a free-living flagellate of the Bodonidae family, order Kinetoplastida, which is considered ancestral to the trypanosomatids. This bodonid isolate is phylogenetically related to Bodo caudatus and Bodo curvifilus . The proteolytic activity profiles of Bodo sp. were determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis containing co-polymerized gelatin, casein, hemoglobin, or bovine serum albumin as substrates. The enzymatic complex degraded gelatin better in acidic pH, and under these conditions four proteolytic bands (120, 100, 90, and 75 kDa) were detected in the cellular or extracellular extracts. Two peptidases (250 and 200 kDa) were exclusively detected with the substrate casein. All these enzymes belong to the serine peptidase class, based on inhibition by aprotinin and phenylmethylsulfonyl fluoride. This is the first biochemical characterization of peptidases in a free-living Bodo sp., potentially providing insight into the physiology of these protozoa and the evolutionary importance of peptidases to the order Kinetoplastida as some of these enzymes are important virulence factors in pathogenic trypanosomatids.     

The potential ecological costs and cobenefits of REDD: a critical review and case study from the Amazon region

The United Nations climate treaty may soon include a mechanism for compensating tropical nations that succeed in reducing carbon emissions from deforestation and forest degradation, source of nearly one fifth of global carbon emissions. We review the potential for this mechanism [reducing emissions from deforestation and degradation (REDD)] to provoke ecological damages and promote ecological cobenefits. Nations could potentially participate in REDD by slowing clear‐cutting of mature tropical forest, slowing or decreasing the impact of selective logging, promoting forest regeneration and restoration, and expanding tree plantations. REDD could also foster efforts to reduce the incidence of forest fire. Potential ecological costs include the accelerated loss (through displaced agricultural expansion) of low‐biomass, high‐conservation‐value ecosystems, and substitution of low‐biomass vegetation by monoculture tree plantations. These costs could be avoided through measures that protect low‐biomass native ecosystems. Substantial ecological cobenefits should be conferred under most circumstances, and include the maintenance or restoration of (1) watershed functions, (2) local and regional climate regimes, (3) soils and biogeochemical processes, (4) water quality and aquatic habitat, and (5) terrestrial habitat. Some tools already being developed to monitor, report and verify (MRV) carbon emissions performance can also be used to measure other elements of ecosystem function, making development of MRV systems for ecological cobenefits a concrete possibility. Analysis of possible REDD program interventions in a large‐scale Amazon landscape indicates that even modest flows of forest carbon funding can provide substantial cobenefits for aquatic ecosystems, but that the functional integrity of the landscape's myriad small watersheds would be best protected under a more even spatial distribution of forests. Because of its focus on an ecosystem service with global benefits, REDD could access a large pool of global stakeholders willing to pay to maintain carbon in forests, thereby providing a potential cascade of ecosystem services to local stakeholders who would otherwise be unable to afford them.     

Preservation potential of Katharina tunicata and Mopalia muscosa (Mollusca, Polyplacophora) on two rocky shores of San Juan Island, Washington, USA

Taphonomic analyses of modern Katharina tunicata and Mopalia muscosa valves (Mollusca, Polyplacophora) collected from San Juan Island, Washington, USA, demonstrate that preservation potential of chitons varies by species and locality. Damage levels observed in the valves reflect differences in extrinsic environmental conditions, but intrinsic characters affect response of the skeletal material to local processes. Although both are more likely to become fossils at the lower energy site, K. tunicata valves in poor condition are more likely to occur than poor-condition M. muscosa valves at either site. Mopalia muscosa valves are least likely to be preserved at the higher energy site. Katharina tunicata valves appear more resistant to destruction than M. muscosa valves, suggesting that the former are more likely to become fossilized. The preservation potential of the three types of valves (normally one head, six medials, and one tail per individual) differs for both species. Medials are more likely to be preserved than either terminal valve of K. tunicata or M. muscosa . Head valves are least likely to be preserved, but K. tunicata heads are less likely to be preserved than M. muscosa heads. The biases are not due to greater frequency of medials, because valves do not occur in the 3:1 ratio seen in living animals. Divergence from expected ratios and variation in taphonomic condition for all three valve types in modern environments agrees with observations in the fossil record. The rarity of fossil chitons may be due to biases against preservation rather than absence in ancient environments.