Soil carbon balance in a clonal Eucalyptus plantation in Congo: effects of logging on carbon inputs and soil CO2 efflux

Soil CO₂ efflux was measured in clear‐cut and intact plots in order to quantify the impact of harvest on soil respiration in an intensively managed Eucalyptus plantation, and to evaluate the increase in heterotrophic component of soil respiration because of the decomposition of harvest residues. Soil CO₂ effluxes showed a pronounced seasonal trend, which was well related to the pattern of precipitation and soil water content and were always significantly lower in the clear‐cut plots than in the intact plots. On an annual basis, soil respiration represented 1.57 and 0.91 kg_C m^?2 yr^?1 in intact and clear‐cut plots, respectively. During the first year following harvest, residues have lost 0.79 kg_C m^?2 yr^?1. Our estimate of heterotrophic respiration was calculated assuming that it was similar to soil respiration in the clear‐cut area except that the decomposition of residues did not occur, and it was further corrected for differences in soil water content between intact and clear‐cut plots and for the cessation of leaf and fine root turnover in clear cut. Heterotrophic respiration in clear‐cut plots was estimated at 1.18 kg_C m^?2 yr^?1 whereas it was only 0.65 kg_C m^?2 yr^?1 in intact plots (41% of soil respiration). Assumptions and uncertainties with these calculations are discussed.     

Rapid biogeographical plankton shifts in the North Atlantic Ocean

Large‐scale biogeographical changes in the biodiversity of a key zooplankton group (calanoid copepods) were detected in the north‐eastern part of the North Atlantic Ocean and its adjacent seas over the period 1960–1999. These findings provided key empirical evidence for climate change impacts on marine ecosystems at the regional to oceanic scale. Since 1999, global temperatures have continued to rise in the region. Here, we extend the analysis to the period 1958–2005 using all calanoid copepod species assemblages (nine species assemblages based on an analysis including a total of 108 calanoid species or taxa) and show that this phenomenon has been reinforced in all regions. Our study reveals that the biodiversity of calanoid copepods are responding quickly to sea surface temperature (SST) rise by moving geographically northward at a rapid rate up to about 23.16 km yr^?1. Our analysis suggests that nearly half of the increase in sea temperature in the northeast Atlantic and adjacent seas is related to global temperature rises (46.35% of the total variance of temperature) while changes in both natural modes of atmospheric and oceanic circulation explain 26.45% of the total variance of temperature. Although some SST isotherms have moved northwards by an average rate of up to 21.75 km yr^?1 (e.g. the North Sea), their movement cannot fully quantify all species assemblage shifts. Furthermore, the observed rates of biogeographical movements are far greater than those observed in the terrestrial realm. Here, we discuss the processes that may explain such a discrepancy and suggest that the differences are mainly explained by the fluid nature of the pelagic domain, the life cycle of the zooplankton and the lesser anthropogenic influence (e.g. exploitation, habitat fragmentation) on these organisms. We also hypothesize that despite changes in the path and intensity of the oceanic currents that may modify quickly and greatly pelagic zooplankton species, these organisms may reflect better the current impact of climate warming on ecosystems as terrestrial organisms are likely to significantly lag the current impact of climate change.     

Combined impacts of longline fisheries and climate on the persistence of the Amsterdam Albatross Diomedia amsterdamensis

Incidental capture of seabirds in longline fishing gear is a central issue in the conservation of many long-lived marine species. Despite growing evidence of climate-induced effects on population trends of long-lived species, climate change remains generally overlooked in most risk assessments of seabirds. Because variation in climate may interact with the detrimental effects of bycatch, considering climate is of great importance, especially in the context of ongoing global warming. This paper examines the combined effects of bycatch and climate change on the persistence of one of the world's rarest birds, the Amsterdam Albatross Diomedea amsterdamensis , which has a single population in the upland plateau of Amsterdam Island (Southeast Indian Ocean). Using continuous monitoring from 1983 onwards, we first estimated the relationship between climate and the species' demographic parameters. We then built a stochastic matrix population model to estimate the population growth rate and the probability that the population declines below the level recorded in 1983 of nine breeding pairs under different scenarios involving the joint effects of additional mortality caused by longline fisheries and climate change. The results suggest that the demography of the Amsterdam Albatross is influenced by climate in both breeding and wintering grounds and that these relationships may to some extent compensate for the impact of additive bycatch mortality. However, these compensatory effects would be negligible if the annual additional mortality exceeds around six individuals per year, suggesting that the resumption of longline fishery in the foraging range of the Amsterdam Albatross would rapidly put this species at risk of extinction.     

Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth

We investigated the function of ASN2, one of the three genes encoding asparagine synthetase (EC 6.3.5.4), which is the most highly expressed in vegetative leaves of Arabidopsis thaliana. Expression of ASN2 and parallel higher asparagine content in darkness suggest that leaf metabolism involves ASN2 for asparagine synthesis. In asn2‐1 knockout and asn2‐2 knockdown lines, ASN2 disruption caused a defective growth phenotype and ammonium accumulation. The asn2 mutant leaves displayed a depleted asparagine and an accumulation of alanine, GABA, pyruvate and fumarate, indicating an alanine formation from pyruvate through the GABA shunt to consume excess ammonium in the absence of asparagine synthesis. By contrast, asparagine did not contribute to photorespiratory nitrogen recycle as photosynthetic net CO₂ assimilation was not significantly different between lines under both 21 and 2% O₂. ASN2 was found in phloem companion cells by in situ hybridization and immunolocalization. Moreover, lack of asparagine in asn2 phloem sap and lowered ¹⁵N flux to sinks, accompanied by the delayed yellowing (senescence) of asn2 leaves, in the absence of asparagine support a specific role of asparagine in phloem loading and nitrogen reallocation. We conclude that ASN2 is essential for nitrogen assimilation, distribution and remobilization (via the phloem) within the plant.     

Current distribution and potential extent of the most invasive alien plant species on La Réunion (Indian Ocean,Mascarene islands)

Abstract La Réunion Island has the largest area of intact vegetation of the islands in the Mascarene archipelago. Biological invasions are the primary threat to biodiversity in the intact habitats of the island (those not already transformed by agriculture and urbanization). Our study aimed to identify areas to prioritize in managing invasive alien plants for biodiversity conservation. We used extensive surveys of 238 distinct untransformed areas on La Réunion to define the current distribution patterns of all invasive species. Using expert knowledge, we compiled maps of the current distribution of the 46 most widespread/important invasive plants at the habitat scale (identified according to vegetation structure). Data from 440 botanical relevés for the 20 most threatening invasive alien plant species across the island and climatic envelope models were used to derive climatic suitability surfaces; these were used to map potential distributions for these species. More than 10 species invade 16.7% of the remaining habitat. Five habitat types are invaded by 25 or more species, and eight have fewer than 10 invasive alien plant species. Cluster analysis based on presence/absence of species in the 18 habitat types produced eight groups of species that invade particular habitats. Potential distribution models show that some species have invaded large parts of their potential range (e.g. Fuchsia magellanica, Furcraea foetida, Hiptage benghalensis), whereas others have the potential to increase their range substantially (e.g. Clidemia hirta, Strobilanthes hamiltonianus, Ulex europaeus). Management implications are identified for both groups. Three broad groups of habitats were identified: (i) intact habitats with a low level of invasion (e.g. subalpine shrubland); (ii) moderately invaded habitats with varying levels of intactness (ranging from windward submountain rainforest to the Acacia heterophylla forest); and (iii) habitats with little remaining intact area and high levels of invasion (e.g. lowland rainforest). Different management interventions are appropriate for these three groups.     

Age-specific effect of heterozygosity on survival in alpine marmots, Marmota marmota

The fitness consequences of heterozygosity and the mechanisms underpinning them are still highly controversial. Using capture–mark–recapture models, we investigated the effects of individual heterozygosity, measured at 16 microsatellite markers, on age-dependent survival and access to dominance in a socially monogamous mammalian species, the alpine marmot. We found a positive correlation between standardized multilocus heterozygosity and juvenile survival. However, there was no correlation between standardized multilocus heterozygosity and either survival of older individuals or access to dominance. The disappearance of a significant heterozygosity fitness correlation when individuals older than juveniles are considered is consistent with the prediction that differences in survival among individuals are maximal early in life. The lack of a correlation between heterozygosity and access to dominance may be a consequence of few homozygous individuals attaining the age at which they might reach dominance. Two hypotheses have been proposed to explain heterozygosity-fitness correlations: genome-wide effects reflected by all markers or local effects of specific markers linked to genes that determine fitness. In accordance with genome-wide effects of heterozygosity, we found significant correlations between heterozygosities calculated across single locus or across two sets of eight loci. Thus, the genome-wide heterozygosity effect seems to explain the observed heterozygosity-fitness correlation in the alpine marmot.     

Enhancement of root hydraulic conductivity by methyl jasmonate and the role of calcium and abscisic acid in this process

The role of jasmonic acid in the induction of stomatal closure is well known. However, its role in regulating root hydraulic conductivity (L) has not yet been explored. The objectives of the present research were to evaluate how JA regulates L and how calcium and abscisic acid (ABA) could be involved in such regulation. We found that exogenous methyl jasmonate (MeJA) increased L of Phaseolus vulgaris, Solanum lycopersicum and Arabidopsis thaliana roots. Tomato plants defective in JA biosynthesis had lower values of L than wild‐type plants, and that L was restored by addition of MeJA. The increase of L by MeJA was accompanied by an increase of the phosphorylation state of the aquaporin PIP2. We observed that MeJA addition increased the concentration of cytosolic calcium and that calcium channel blockers inhibited the rise of L caused by MeJA. Treatment with fluoridone, an inhibitor of ABA biosynthesis, partially inhibited the increase of L caused by MeJA, and tomato plants defective in ABA biosynthesis increased their L after application of MeJA. It is concluded that JA enhances L and that this enhancement is linked to calcium and ABA dependent and independent signalling pathways.     

Interdecadal changes in at‐sea distribution and abundance of subantarctic seabirds along a latitudinal gradient in the Southern Indian Ocean

Long‐term demographic studies have recently shown that global climate change together with increasing direct impacts of human activities, such as fisheries, are affecting the population dynamics of marine top predators. However, the effects of these factors on species distribution and abundance at sea are still poorly understood, particularly in marine ecosystems of the southern hemisphere. Using a unique long‐term data set of at‐sea observations, we tested for interdecadal (1980s vs. 2000s) changes in summer abundance and distribution of 12 species of Albatrosses and Petrels along a 30° latitudinal gradient between tropical and Antarctic waters of the southern Indian Ocean. There were contrasting effects of climate change on subantarctic seabird distribution and abundance at sea. While subtropical waters showed the highest rate of warming, the species that visited this water mass showed the greatest changes in distribution and abundance. The abundance of Wandering Albatrosses (Diomedea exulans), White‐chinned Petrels (Procellaria aequinoctialis) and Giant Petrels (Macronectes sp.) declined markedly, whereas the other species showed contrasting trends or did not change. With the exception of the White‐chinned Petrel, these decreases were at least partly related to regional increase in sea surface temperature. The southward shift of Wandering Albatross and Prions (Pachyptila spp.) distributions could be ascribed to species redistribution or decrease in abundance due to warming of the subtropical waters. Surprisingly, White‐chinned Petrel distribution shifted northward, suggesting more complex mechanisms. This study is the first to document a shift in species range in the Southern Ocean related to climate change and contrasting abundance changes. It suggests that some species might experience more severe impacts from climate change depending on the water masses they visit. As climate changes are predicted to continue in the next decades, understanding species responses to climate change is crucial for conservation management, especially when their conservation status is critical or unknown.