Association between DRD4 gene polymorphism and personality variation in great tits: a test across four wild populations

Polymorphisms in the dopamine receptor D4 gene (DRD4) have been related to individual variation in novelty‐seeking or exploratory behaviour in a variety of animals, including humans. Recently, the human DRD4 orthologue was sequenced in a wild bird, the great tit (Parus major) and a single nucleotide polymorphism in exon 3 of this gene (SNP830) was shown to be associated with variation in exploratory behaviour of lab‐raised individuals originating from a single wild population. Here we test the generality of this finding in a large sample of free‐living individuals from four European great tit populations, including the originally sampled population. We demonstrate that the association between SNP830 genotype and exploratory behaviour also exists in free‐living birds from the original population. However, in the other three populations we found only limited evidence for an association: in two populations the association appeared absent; while in one there was a nonsignificant tendency. We could not confirm a previously demonstrated interaction with another DRD4 polymorphism, a 15 bp indel in the promoter region (ID15). As yet unknown differences in genetic or environmental background could explain why the same genetic polymorphism (SNP830) has a substantial effect on exploratory behaviour in one population, explaining 4.5–5.8% of the total variance—a large effect for a single gene influencing a complex behavioural trait—but not in three others. The confirmation of an association between SNP830 genotype and personality‐related behaviour in a wild bird population warrants further research into potential fitness effects of the polymorphism, while also the population differences in the strength of the association deserve further investigation. Another important future challenge is the identification of additional loci influencing avian personality traits in the wild.     

Extended larval development time for aphid parasitoids in the presence of plant endosymbionts

Abstract 1. Variation in plant chemistry does not only mediate interactions between plants and herbivores but also those between herbivores and their natural enemies, and plants and natural enemies. 2. Endophytic fungi complete their whole life cycle within the host plant’s tissue and are associated with a large diversity of plant species. Endophytes of the genus Neotyphodium alter the chemistry of the host plant by producing herbivore toxic alkaloids. 3. Here we asked whether the endophyte‐tolerant aphid species Metopolophium festucae could be defended against its parasitoid Aphidius ervi when feeding on endophyte‐infected plants. In a laboratory experiment, we compared life‐history traits of A. ervi when exposed to hosts on endophyte‐infected or endophyte‐free Lolium perenne. 4. The presence of endophytes significantly increased larval and pupal development times, but did not affect the mortality of immature parasitoids or the longevity of the adults. Although the number of parasitoid mummies tended to be reduced on endophyte‐infected plants, the number of emerging parasitoids did not differ significantly between the two treatments. 5. This shows that the metabolism of individual aphids feeding on infected plants may be changed and help in the defence against parasitoids. An increase in parasitoid development time should ultimately reduce the population growth of A. ervi. Therefore, endophyte presence may represent an advantage for endophyte‐tolerant aphid species through extended parasitoid development and its effect on parasitoid population dynamics.     

EFFECT OF VIEWING BACKGROUND ON TURBIDITY PERCEPTION THRESHOLDS

Colloidal‐size synthetic‐polymer microspheres of three sizes (0.15, 0.31 and 0.70‐µm diameter) were each suspended in liquids of three different colors (clear, tan and dark brown) at a range of concentrations. The samples were presented to panelists in a viewing box. Visual‐threshold determinations were made for each of the nine sample sets using the ascending method of limits (AMLs) and bright illumination (1,192 lux) with each of the three viewing backgrounds: black velvet, white cotton and white taffeta. The thresholds were much more similarly expressed as turbidimeter observations than as either weight or number concentration. With the black‐velvet background, the thresholds ranged from 0.206 to 2.190 nephelometric turbidity units (NTU). With white cotton and white taffeta, they were considerably higher (P < 0.001), ranging from 1.97 to 41.00 and 2.97 to 34.40 NTU, respectively. This large difference appears to be a matter of contrast – scattered white light is much easier to perceive against a dark background.     

Stromatoporoid palaeoecology in the Frasnian (Upper Devonian) Belgian platform,and its applications in interpretation of carbonate platform environments

Abstract: Stromatoporoid faunas in the Frasnian of southern Belgium are abundant in the carbonate platform environments present in this area. Stromatoporoids dominate the large skeletal organisms and occur principally in biostromes. The stromatoporoid assemblage is represented by a small number of taxa. Stromatoporoid genera include Actinostroma, Amphipora, Atelodictyon, Clathrocoilona, Salairella, Stachyodes, Stictostroma, Stromatopora and Trupetostroma which are present in environments ranging from the outer, outer intermediate, inner intermediate and inner zones and associated biostromes. Most large skeletal stromatoporoids are low profile, which reinforces the conclusions of previous studies that low‐profile growth forms were the most successful stromatoporoid forms. These low‐profile forms are likely to have been important sediment stabilisers that may have led to expansion of the carbonate factory. Growth forms vary between facies, indicating some degree of environmental control on form; for example, laminar in the intermediate zone, bulbous and domical in the inner and outer zones. Stromatoporoid taxa vary in occurrence across the environmental gradient from shallow to deep. There is some taxonomic control on growth forms, with some taxa showing more variability than others in different environments.     

Postcranial morphology,functional adaptations and palaeobiology of Callistoe vincei,a predaceous metatherian from the Eocene of Salta,north‐western Argentina

Abstract: Callistoe vincei Babot et al., 2002 is a Paleogene borhyaenoid known from exceptionally complete postcranial elements, which provides rare information about the anatomy and evolutionary history of metatherian predators during the South American Cenozoic. The axial skeleton of Callistoe is characterized by the peculiar transverse processes of the cervical vertebrae emphasizing lateral instead of sagittal traction. There is no clavicle and eighteen thoracolumbar vertebrae, of which only five are lumbars. The shoulder and elbow joints suggest movements restricted to parasagittal flexion/extension that are consistent with primarily terrestrial locomotion, as is also emphasized in Borhyaena tuberata and Lycopsis longirostrus. On the manus, the pollex is not reduced and the ungual phalanges indicate very long claws, similar to those observed in some extant digging taxa. This feature is unique to C. vincei among borhyaenoids. The knee joint is characterized by the presence of ossified patellae but shallow femoral trochleae. This joint suggests that the leg was nearly parasagittal, a position also inferred for Borhyaena. The astragalus shape is consistent with parasagittal flexion/extension, as in all Miocene–Pliocene borhyaenoids. The hind foot is characterized by reduced claws in comparison with the manus as well as the slenderness of the first and fifth digits, another peculiarity of C. vincei. The habitat of Callistoe was a temperate humid forest and according to the known fossil record, Callistoe was the largest mammalian predator of its time, sharing the predator ecological niche with crocodiles.     

Effects of river ice on riparian vegetation

1. Many rivers and streams experience pronounced ice dynamics caused by the formation of anchor and frazil ice, leading to flooding and disturbance of riparian and aquatic communities. However, the effects of dynamic ice conditions on riverine biota are little known. 2. We studied the formation of anchor ice in natural streams over 2 years and assessed the effects of anchor ice on riparian vegetation by comparing sites with frequent or abundant and little or no anchor ice formation. We also studied the direct impact of ice on riparian plants by experimentally creating ice in the riparian zone over three winters and by exposing plants of different life forms to ?18 °C cold ice in the laboratory. 3. Riparian species richness per 1‐m² plot was higher at sites affected by anchor ice than at sites where anchor ice was absent or rare, whereas dominance was lower, suggesting that disturbance by ice enhances species richness. Species composition was more homogenous among plots at anchor ice sites. By experimentally creating riparian ice, we corroborated the comparative results, with species richness increasing in ice‐treated plots compared to controls, irrespective of whether the sites showed natural anchor ice. 4. Because of human alterations of running waters, the natural effects of river ice on stream hydrology, geomorphology and ecology are little known. Global warming in northern streams is expected to lead to more dynamic ice conditions, offering new challenges for aquatic organisms and river management. Our results should stimulate new research, contributing to a better understanding of ecosystem function during winter.     

Sedimentology and stromatoporoid palaeoecology of Frasnian (Upper Devonian) carbonate mounds in southern Belgium

Da Silva, A.‐C., Kershaw, S. & Boulvain, F. 2011: Sedimentology and stromatoporoid palaeoecology of Frasnian (Upper Devonian) carbonate mounds in southern Belgium. Lethaia, Vol. 44, pp. 255–274. Stromatoporoids are the most abundant large skeletal organisms in middle Frasnian carbonate mound environments of southern Belgium. They occur in environments ranging from flank and off‐mound, mound core, shallow mound and restricted mound. A detailed log and comprehensive sampling of stromatoporoids in a single section cutting through all middle Frasnian mound levels in La Boverie–Rochefort Quarry, near Rochefort and Dinant reveals a stromatoporoid assemblage comprising 10 genera; 472 samples, containing an overall total of 3079 stromatoporoids (including complete and fragmented specimens) have been studied. The following list gives abundance using numbers of specimens and areas of total stromatoporoid area on outcrop surfaces (% number; % area in cm²): Actinostroma (0.4; 9.2), Amphipora (15.5; 1.7), Atelodictyon (0.2; 4.4), Clathrocoilona (0.3; 0.5), Euryamphipora (13.7; 0.7), Idiostroma (2; 1.9), Salairella (1.2; 9.6), branching Stachyodes (43.2; 59.1), laminar Stachyodes australe (1.9; 1.3), Stictostroma (4.8; 13.1) and Trupetostroma (0.2; 0.8), showing that Stachyodes is approximately half of the total assemblage. Deeper environments contain more abundant low profile forms, shallow water facies contain more domical and bulbous forms; branching forms are ubiquitous. Low profile stromatoporoids are likely to have been important sediment stabilizers that may have led to expansion of the carbonate factory, and they may have therefore contributed to the structural building of the mounds. Stromatoporoid‐coral intergrowths are observed in only Stictostroma suggesting that there is a close biological relationship between them; however, stromatoporoid skeletons in almost all cases appear to be unaffected by the presence of intergrown corals, suggesting they were commensals. □Frasnian, Late Devonian, mounds, palaeoecology, stromatoporoid.     

Soluble and membrane-associated nitrate reductases in the dinoflagellate Peridinium gatunense

An improved method of cell fractionation allowed the extraction of soluble (sNR) and membrane-associated (mNR) forms of nitrate reductase (NR) from a dinoflagellate, even though in previous studies only mNR had been found in these algae. Both activities were assayed in cell-free extracts of Peridinium gatunense from Lake Kinneret, Israel, after disruption of the cells and differential centrifugation. In the cultures used, sNR showed much higher NO₃⁻-reducing activity. Only a low proportion, 2.5–3% of NR activity, was found to be associated with mNR. Moreover, mNR comprised two forms as indicated by protein solubilization: a tightly membrane-bound and a more weakly attached NR. Ascorbate inhibited all NR activities, but that of mNR recovered after its removal. Polyvinyl pyrrolidone (PVP) and DTT also diminished sNR and mNR activities. For both enzymes, pH optima (7.65) and temperature optima (13–25°C) were similar, and agreed with those for optimum growth of P. gatunense both in culture and in the lake. The most efficient electron donor was NADH, though NADPH sustained low NR activities. Carboxylic anions such as succinate and malate did not support any reduction of NO₃⁻, nor did they cause any stimulation of sNR or mNR activities. Both forms of NR showed a high affinity for their substrates: K _m was c. 10 μM for NO₃⁻ and c. 5 μM for NADH. The high efficiency of NO₃⁻ assimilation by Peridinium seems to be limited mainly by energy under otherwise optimal nutritional conditions and, at low nitrate concentrations, the low K _m may be one of the main reasons for the high competitivity of this alga in Lake Kinneret.     

Fungal community responses to precipitation

Understanding how fungal communities are affected by precipitation is an essential aspect of predicting soil functional responses to future climate change and the consequences of those responses for the soil carbon cycle. We tracked fungal abundance, fungal community composition, and soil carbon across 4 years in long‐term field manipulations of rainfall in northern California. Fungi responded directly to rainfall levels, with more abundant, diverse, and consistent communities predominating under drought conditions, and less abundant, less diverse, and more variable communities emerging during wetter periods and in rain‐addition treatments. Soil carbon storage itself did not vary with rainfall amendments, but increased decomposition rates foreshadow longer‐term losses of soil carbon under conditions of extended seasonal rainfall. The repeated recovery of fungal diversity and abundance during periodic drought events suggests that species with a wide range of environmental tolerances coexist in this community, consistent with a storage effect in soil fungi. Increased diversity during dry periods further suggests that drought stress moderates competition among fungal taxa. Based on the responses observed here, we suggest that there may be a relationship between the timescale at which soil microbial communities experience natural environmental fluctuations and their ability to respond to future environmental change.