Community assembly after long-term fragmentation: a case study of tropical rainforest in Xishuangbanna,south-west China

Background: Tropical rainforests represent the most species-rich and at the same time the most fragmented terrestrial biome on Earth. Fragmentation of tropical rainforests is having wide-ranging consequences for the maintenance of local species diversity and community assembly patterns.

Aims: To examine floristic changes and changes in community phylogenetic structure in the forest fragment over the past five decades.

Methods: A new taxonomic diversity algorithm (within-family diversity) was developed to assess floristic changes in the forest fragment. Community phylogenetic structure was then compared before and after fragmentation.

Results: Taxonomic diversity changed greatly among families, with changes occurring randomly across the phylogeny. The forest fragment had higher phylogenetic diversity, higher mean pair-wise phylogenetic distance, but lower mean nearest-neighbour distance. The community phylogenetic structure has changed significantly from clustering to dispersion.

Conclusions: High species turnover occurred in the forest fragment. While shade-tolerant species have been lost, and ruderal and alien species have been added, overall phylogenetic diversity has increased with species being more phylogenetically distant. Competitive exclusion, which was related to the relatively drier conditions in the forest after fragmentation, led the plant community phylogenetic structure to be more dispersed.     

Baicalein Inhibits Staphylococcus aureus Biofilm Formation and the Quorum Sensing System In Vitro

Biofilm formed by Staphylococcus aureus significantly enhances antibiotic resistance by inhibiting the penetration of antibiotics, resulting in an increasingly serious situation. This study aimed to assess whether baicalein can prevent Staphylococcus aureus biofilm formation and whether it may have synergistic bactericidal effects with antibiotics in vitro. To do this, we used a clinically isolated strain of Staphylococcus aureus 17546 (t037) for biofilm formation. Virulence factors were detected following treatment with baicalein, and the molecular mechanism of its antibiofilm activity was studied. Plate counting, crystal violet staining, and fluorescence microscopy revealed that 32 μg/mL and 64 μg/mL baicalein clearly inhibited 3- and 7-day biofilm formation in vitro. Moreover, colony forming unit count, confocal laser scanning microscopy, and scanning electron microscopy showed that vancomycin (VCM) and baicalein generally enhanced destruction of biofilms, while VCM alone did not. Western blotting and real-time quantitative polymerase chain reaction analyses (RTQ-PCR) confirmed that baicalein treatment reduced staphylococcal enterotoxin A (SEA) and α-hemolysin (hla) levels. Most strikingly, real-time qualitative polymerase chain reaction data demonstrated that 32 μg/mL and 64 μg/mL baicalein downregulated the quorum-sensing system regulators agrA, RNAIII, and sarA, and gene expression of ica, but 16 μg/mL baicalein had no effect. In summary, baicalein inhibited Staphylococcus aureus biofilm formation, destroyed biofilms, increased the permeability of vancomycin, reduced the production of staphylococcal enterotoxin A and α-hemolysin, and inhibited the quorum sensing system. These results support baicalein as a novel drug candidate and an effective treatment strategy for Staphylococcus aureus biofilm-associated infections.     

Autophagy regulates biliary differentiation of hepatic progenitor cells through Notch1 signaling pathway

Autophagy plays important roles in self-renewal and differentiation of stem cells. Hepatic progenitor cells (HPCs) are thought to have the ability of self-renewal as well as possess a bipotential capacity, which allows them to differentiate into both hepatocytes and bile ductular cells. However, how autophagy contributes to self-renewal and differentiation of hepatic progenitor cells is not well understood. In this study, we use a well-established rat hepatic progenitor cell lines called WB-F344, which is treated with 3.75 mM sodium butyrate (SB) to promote the differentiation of WB-F344 along the biliary phenotype. We found that autophagy was decreased in the early stage of biliary differentiation, and maintained a low level at the late stage. Activation of autophagy by rapamycin or starvation suppressed the biliary differentiation of WB-F344. Further study reported that autophagy inhibited Notch1 signaling pathway, which contributed to biliary differentiation and morphogenesis. In conclusions, autophagy regulates biliary differentiation of hepatic progenitor cells through Notch1 signaling pathway.     

太空诱变玉米核不育突变体矮化的遗传及外施赤霉素分析

为了解太空诱变玉米核不育突变体矮化的遗传规律和原因,该研究以不育突变体为母本,自交系178、478为父本,对测交 F1、F2群体进行育性鉴定和株高分析,对 F2可育株进行基因型和株高分析,对姊妹交后代分离群体进行育性鉴定和株高、雄穗长度、节间数、节间长度分析,同时,还对姊妹交后代分离群体进行施赤霉素处理,调查育性和株高的变化。结果表明：178和478背景下的 F1表现出与测交母本一样的极显著差异;在178和478核背景下的 F2中,不育株株高极显著矮于可育株,两核背景下的不育株间株高差异不显著,而可育株间株高差异极显著;F2中纯合和杂合可育株的株高差异不显著;姊妹交后代分离群体中不育株株高、雄穗长度、节间数和节间长度极显著小于可育株;外施赤霉素的不育株在苗期表现出对赤霉素一定的敏感性,但株高最终未恢复正常高度。因此,得出该突变体矮化表现稳定,与不育性状并存,且不受细胞核背景的影响;核不育基因对植株株高的矮化无剂量效应;突变体的矮化与雄穗长度、节间数和节间长度有关;突变体不完全属于赤霉素不敏感型,其矮化并不是单一缺乏赤霉素而引起。该研究结果为认识太空诱变玉米核不育突变体矮化的遗传和生理机制提供了参考。     

复方雷公藤逐痛颗粒辅助治疗痰瘀互结型类风湿关节炎的临床效果观察

目的:评价复方雷公藤逐痛颗粒治疗活动期类风湿关节炎痰瘀互结证的临床有效性和安全性。方法:选择2013年2月～2015年5月在上海光华中西医结合医院类风关内科门诊及住院的活动性痰瘀互结型类风湿关节炎患者63例,按治疗方式分为对照组33例和中西医结合治疗组30例,对照组采用西医治疗(甲氨蝶呤+青霉胺),治疗组采用中西医结合治疗(复方雷公藤逐痛颗粒+甲氨蝶呤+青霉胺)。治疗12周后,比较两组患者的临床疗效及各项观察指标的改善情况。结果:治疗后,两组患者晨僵持续时间、关节肿胀数、关节压痛数、中医症候积分、血沉(ESR)、血清CRP水平,疼痛VAS评分、患者总体状态自我VAS评分及DAS28评分均较治疗前显著下降(P0.05),且治疗组患者的上述各项指标均明显低于对照组(P0.05)。治疗期间,两组患者均未出现严重不良反应而中断治疗的情况,监测肝肾功能指标均未发现明显异常。结论:复方雷公藤逐痛颗粒辅助治疗痰瘀互结型类风湿关节炎的临床疗效确切,明显优于单用西医治疗,其有助于增强西医治疗对患者临床症状的缓解效果,提高患者的生活质量,且用药安全。     

Leucine ureido derivatives as aminopeptidase N inhibitors using click chemistry. Part II

Aminopeptidase N (APN) has been proved to be deeply associated with cancer angiogenesis, metastasis and invasion. Therefore, APN gains increasing attention as a promising anti-tumor target. In the current study, we report the design, synthesis, biological evaluation and structure-activity relationship of one new series of leucine ureido derivatives containing the 1,2,3-triazole moiety. Among them, compound 31f was identified as the best APN inhibitor with IC₅₀ value being two orders of magnitude lower than that of the positive control bestatin. Compound 31f possessed selective cytotoxicity to several tumor cell lines over the normal cell line human umbilical vein endothelial cells (HUVECs). Notably, when combined with 5-fluorouracil (5-Fu), 31f exhibited synergistic anti-proliferation effect against several tumor cell lines. At the same concentration, 31f exhibited much better anti-angiogenesis activities than bestatin in the HUVECs capillary tube formation assay and the rat thoracic aorta rings test. In the in vitro anti-invasion assay, 31f also exhibited superior potency over bestatin. Moreover, considerable in vivo antitumor potencies of 31f alone or in combination with 5-Fu were observed without significant toxic signs in a mouse heptoma H22 tumor transplant model.     

表层和下层免耕黑土有机碳矿化速率及激发效应

激发效应是调控土壤有机质分解的重要机制之一,而土层与激发效应的关系还不清晰.本研究通过室内培养试验,采用¹³C葡萄糖标记和动态碱液吸收的方法,探究免耕农田黑土表层土壤(0～10 cm)和下层土壤(30～40 cm)有机碳矿化速率及其激发效应.结果表明: 表层与下层土壤以单位有机碳表示的矿化速率并未发现显著差异.添加葡萄糖使表层土壤原有机质分解加快36.7%(正激发),但使下层土壤原有机质分解减慢12.4%(负激发).在整个培养期间(30 d),表层和下层土壤的累积激发碳量分别为3.14和-1.24 mg C·g^-1 SOC,但由于新碳(葡萄糖)的补偿作用,即使在产生显著正激发的表层土壤中,仍表现为有机碳净积累.说明外源碳输入使不同土层土壤有机质分解的幅度甚至方向产生明显差别.这为今后免耕和秸秆还田等保护性耕作措施的实践提供了重要的理论基础.     

5-HT和DA对虾蟹打斗行为影响的研究进展

5-羟色胺(5-HT)和多巴胺(DA)是两种神经递质,可与众多不同类型的受体结合发挥多种重要的生理功能.现已证明其广泛分布于多种动物的不同组织中,在动物的打斗行为活动中起着重要的调节作用.目前,在虾蟹中已被报道的5-HT受体主要有5种,分别是5-HT1A、5-HT1B、5HT2A、5HT2B和5-HT7;DA受体主要为DA1A、DA1B、DA2和DA4.5-HT和DA及其受体分布存在明显的种属和组织特异性.5-HT和DA参于了虾蟹打斗行为的调节过程并有不同的调节机理.5-HT可以调节环磷酸腺苷(cAMP)或高血糖激素(CHH)的释放,促进或抑制虾蟹打斗行为;而DA同样能够通过调节cAMP及COMT等物质的释放来调节虾蟹打斗行为.     

Interaction of rice dwarf virus outer capsid P8 protein with rice glycolate oxidase mediates relocalization of P8

Yeast two-hybrid and coimmunoprecipitation assays indicated that P8, an outer capsid protein of Rice dwarf phytoreovirus (RDV), interacts with rice glycolate oxidase (GOX), a typical enzyme of peroxisomes. Confocal immunofluorescence microscopy revealed that P8 was colocalized with GOX in peroxisomes. Time course analysis demonstrated that the localization of P8 in Spodoptera frugiperda cells changed from diffuse to discrete, punctuate inclusions during expression from 24 to 48 h post inoculation. Coexpression of GOX with P8 may target P8 into peroxisomes, which serve as replication sites for a number of viruses. Therefore, we conclude that the interaction of P8 with the GOX of host cells leads to translocation of P8 into peroxisomes and we further propose that the interaction between P8 and GOX may play important roles in RDV targeting into the replication site of host cells. Our findings have broad significance in studying the mechanisms whereby viruses target appropriate replication sites and begin their replication.