A stem lineage representative of buttonquails from the Lower Oligocene of Germany – fossil evidence for a charadriiform origin of the Turnicidae

A new species of the charadriiform taxon Turnipax Mayr, 2000 is described from the Lower Oligocene fossil site Frauenweiler in southern Germany. The postcranial skeleton assigned to Turnipax oechslerorum sp. nov. is very well preserved and allows the recognition of significant, previously unknown osteological details of Turnipax , especially concerning the wing and pectoral girdle bones. We provide evidence that Turnipax is a stem lineage representative of the Turnicidae (buttonquails) and synonymize Turnipacidae Mayr, 2000 with Turnicidae Gray, 1840. Turnipax is the earliest fossil representative of the Turnicidae, which otherwise have no Paleogene fossil record. Because recent molecular studies support a charadriiform origin of buttonquails, the mosaic distribution in the skeleton of Turnipax of derived features of the Turnicidae and non-turnicid charadriiform birds is of particular interest. Turnipax exhibits a more plesiomorphic morphology than extant Turnicidae, and we assume that its habitat and way of living differed from that of crown group Turnicidae, which may not have diversified before the spread of grasslands during the Oligocene and Miocene.     

Genetic diversity and differentiation at MHC genes in island populations of tuatara (Sphenodon spp.)

Neutral genetic markers are commonly used to understand the effects of fragmentation and population bottlenecks on genetic variation in threatened species. Although neutral markers are useful for inferring population history, the analysis of functional genes is required to determine the significance of any observed geographical differences in variation. The genes of the major histocompatibility complex (MHC) are well‐known examples of genes of adaptive significance and are particularly relevant to conservation because of their role in pathogen resistance. In this study, we survey diversity at MHC class I loci across a range of tuatara populations. We compare the levels of MHC variation with that observed at neutral microsatellite markers to determine the relative roles of balancing selection, diversifying selection and genetic drift in shaping patterns of MHC variation in isolated populations. In general, levels of MHC variation within tuatara populations are concordant with microsatellite variation. Tuatara populations are highly differentiated at MHC genes, particularly between the northern and Cook Strait regions, and a trend towards diversifying selection across populations was observed. However, overall our results indicate that population bottlenecks and isolation have a larger influence on patterns of MHC variation in tuatara populations than selection.     

Rapid and unexpected effects of piscivore introduction on trophic position and diet of perch (Perca flavescens) in lakes recovering from acidification and metal contamination

1. Yellow perch (Perca flavescens) are often the only surviving fish species in acidified lakes. We studied four lakes along a gradient of recovery from acidification and that had different food web complexities. All had abundant yellow perch, two had low piscivore abundance, one had a well‐established piscivore population and one was manipulated by introducing piscivorous smallmouth bass (Micropterus dolomieu). We hypothesised that there would be strong effects on perch abundance, behaviour and diet induced by the presence of piscivores. 2. In the manipulated lake, the bass reduced yellow perch abundance by 75% over a 2‐year period. Concomitantly, perch use of the pelagic habitat fell from 48 to 40%. 3. In contrast to findings from less disturbed systems, yellow perch in the littoral zone of the manipulated lake did not strongly shift from zooplankton to benthic food sources after the arrival of piscivores. Diet analysis using stable carbon isotopes revealed a strong continued reliance on zooplankton in all lakes, independent of the degree of piscivory. The failure to switch to benthos in the refuge area of the littoral zone is most likely related to the depauperate benthos communities in these formerly acidified lakes. 4. Yellow perch in lakes recovering from acidification face a considerable ecological challenge as the necessary switch to benthic diet is hindered by a low abundance of benthos. The arrival of piscivores in these recovering lakes imposes further restrictions on perch access to food items. We infer that future recovery of perch populations (and higher trophic levels) will have to be preceded by the re‐establishment of diverse benthic macroinvertebrate communities in these lakes.     

Soil nitrous oxide and methane fluxes are low from a bioenergy crop (canola) grown in a semi-arid climate

Understanding nitrous oxide (N₂O) and methane (CH₄) fluxes from agricultural soils in semi‐arid climates is necessary to fully assess greenhouse gas emissions from bioenergy cropping systems, and to improve our knowledge of global terrestrial gaseous exchange. Canola is grown globally as a feedstock for biodiesel production, however, resulting soil greenhouse gas fluxes are rarely reported for semi‐arid climates. We measured soil N₂O and CH₄ fluxes from a rain‐fed canola crop in a semi‐arid region of south‐western Australia for 1 year on a subdaily basis. The site included N fertilized (75 kg N ha^?1 yr^?1) and nonfertilized plots. Daily N₂O fluxes were low (?1.5 to 4.7 g N₂O‐N ha^?1 day^?1) and culminated in an annual loss of 128 g N₂O‐N ha^?1 (standard error, 12 g N₂O‐N ha^?1) from N fertilized soil and 80 g N₂O‐N ha^?1 (standard error, 11 g N₂O‐N ha^?1) from nonfertilized soil. Daily CH₄ fluxes were also low (?10.3 to 11.9 g CH₄‐C ha^?1 day^?1), and did not differ with treatments, with an average annual net emission of 6.7 g CH₄–C ha^?1 (standard error, 20 g CH₄–C ha^?1). Greatest daily N₂O fluxes occurred when the soil was fallow, and following a series of summer rainfall events. Summer rainfall increased soil water contents and available N, and occurred when soil temperatures were >25 °C, and when there was no active plant growth to compete with soil microorganisms for mineralized N; conditions known to promote N₂O production. The proportion of N fertilizer emitted as N₂O, after correction for emissions from the no N fertilizer treatment, was 0.06%; 17 times lower than IPCC default value for the application of synthetic N fertilizers to land (1.0%). Soil greenhouse gas fluxes from bioenergy crop production in semi‐arid regions are likely to have less influence on the net global warming potential of biofuel production than in temperate climates.     

Hazards Affecting Grizzly Bear Survival in the Greater Yellowstone Ecosystem

Abstract: During the past 2 decades, the grizzly bear (Ursus arctos) population in the Greater Yellowstone Ecosystem (GYE) has increased in numbers and expanded its range. Early efforts to model grizzly bear mortality were principally focused within the United States Fish and Wildlife Service Grizzly Bear Recovery Zone, which currently represents only about 61% of known bear distribution in the GYE. A more recent analysis that explored one spatial covariate that encompassed the entire GYE suggested that grizzly bear survival was highest in Yellowstone National Park, followed by areas in the grizzly bear Recovery Zone outside the park, and lowest outside the Recovery Zone. Although management differences within these areas partially explained differences in grizzly bear survival, these simple spatial covariates did not capture site-specific reasons why bears die at higher rates outside the Recovery Zone. Here, we model annual survival of grizzly bears in the GYE to 1) identify landscape features (i.e., foods, land management policies, or human disturbances factors) that best describe spatial heterogeneity among bear mortalities, 2) spatially depict the differences in grizzly bear survival across the GYE, and 3) demonstrate how our spatially explicit model of survival can be linked with demographic parameters to identify source and sink habitats. We used recent data from radiomarked bears to estimate survival (1983–2003) using the known-fate data type in Program MARK. Our top models suggested that survival of independent (age ≥ 2 yr) grizzly bears was best explained by the level of human development of the landscape within the home ranges of bears. Survival improved as secure habitat and elevation increased but declined as road density, number of homes, and site developments increased. Bears living in areas open to fall ungulate hunting suffered higher rates of mortality than bears living in areas closed to hunting. Our top model strongly supported previous research that identified roads and developed sites as hazards to grizzly bear survival. We also demonstrated that rural homes and ungulate hunting negatively affected survival, both new findings. We illustrate how our survival model, when linked with estimates of reproduction and survival of dependent young, can be used to identify demographically the source and sink habitats in the GYE. Finally, we discuss how this demographic model constitutes one component of a habitat-based framework for grizzly bear conservation. Such a framework can spatially depict the areas of risk in otherwise good habitat, providing a focus for resource management in the GYE.     

Tintinnophagus acutus n. g., n. sp. (Phylum Dinoflagellata), an Ectoparasite of the Ciliate Tintinnopsis cylindrica Daday 1887, and Its Relationship to Duboscquodinium collini Grassé 1952

ABSTRACT. The dinoflagellate Tintinnophagus acutus n. g., n. sp., an ectoparasite of the ciliate Tintinnopsis cylindrica Daday, superficially resembles Duboscquodinium collini Grassé, a parasite of Eutintinnus fraknoii Daday. Dinospores of T. acutus are small transparent cells having a sharply pointed episome, conspicuous eyespot, posteriorly positioned nucleus with condensed chromosomes, and rigid form that may be supported by delicate thecal plates. Dinospores attach to the host via a feeding tube, losing their flagella, sulcus, and girdle to become spherical or ovoid cells. The trophont of T. acutus feeds on the host for several days, increasing dramatically in size before undergoing sporogenesis. Successive generations of daughter sporocytes are encompassed in an outer membrane or cyst wall, a feature not evident in trophonts. Tintinnophagus acutus differs from D. collini in host species, absence of a second membrane surrounding pre‐sporogenic stages, and failure to differentiate into a gonocyte and a trophocyte at the first sporogenic division. Phylogenetic analyses based on small subunit (SSU) ribosomal DNA (rDNA) sequences placed T. acutus and D. collini in the class Dinophyceae, with T. acutus aligned loosely with Pfiesteria piscicida and related species, including Amyloodinium ocellatum, a parasite of fish, and Paulsenella vonstoschii, a parasite of diatoms. Dubosquodinium collini nested in a clade composed of several Scrippsiella species and Peridinium polonicum. Tree construction using longer rDNA sequences (i.e. SSU through partial large subunit) strengthened the placement of T. acutus and D. collini within the Dinophyceae.     

Survival of Rio Grande Wild Turkeys on the Edwards Plateau of Texas

Abstract: The southeastern portion of the Edwards Plateau of Texas, historically a stronghold of Rio Grande wild turkeys (Meleagris gallopavo intermedia), has seen a decline in turkey numbers since the 1970s. Because adult and juvenile survival are key parameters affecting turkey population dynamics, we used radiotagged individuals to compare Rio Grande wild turkey survival in areas of suspected decline versus stable portions of the Edwards Plateau during 2001–2003. Reproductive period (breeding or nonbreeding) had an impact on survival, but differences in age, sex, or region did not influence survival. Model averaged estimates of monthly survival were 0.97 (SE = 0.005) for nonbreeding periods and 0.96 (SE = 0.007) for breeding periods. Our results indicate juvenile and adult survival in the declining areas was similar to survival in the stable areas of the Edwards Plateau. This suggests causes of the decline might be associated with differences during other life-history stages, such as nest success or poult survival, although we cannot rule out the possibility juvenile or adult survival contributed to the decline in the past. This situation demonstrates why wildlife managers should be cognizant of the implications of initiating long-term monitoring programs after changes in population status occur, rather than initiating them in expectation of such changes.     

Phylogeny of the parasitic wasp subfamily Euphorinae (Braconidae) and evolution of its host preferences

The braconid subfamily Euphorinae is a large, cosmopolitan group of endoparasitoid wasps. The majority of species attack adult hosts, a strategy that is rare among parasitic wasps, but there are also many species that attack nymphs and larval stages. Euphorine hosts may belong to a variety of insect orders (Coleoptera, Hemiptera, Hymenoptera, Neuroptera, Psocoptera, Orthoptera and Lepidoptera) although most euphorine tribes are confined to Coleoptera. Here we investigate the phylogenetic relationships of the Euphorinae based on molecular data (3 kb of nucleotide data from four markers: 18S, 28S, CAD and COI) and propose a higher‐level classification based upon the resulting phylogeny. We also infer the evolution of host associations and discuss the diversification of the Euphorinae. Results from both Bayesian inference and maximum‐likelihood analysis show that the subfamily, as previously circumscribed, is paraphyletic. We propose that the subfamily be expanded to include the tribes Meteorini and Planitorini (Mannokeraia + Planitorus), so that it corresponds to a clade that is strongly supported as monophyletic in our analyses. Based on our results, a revised higher classification of the Euphorinae is proposed, in which 52 extant genera and 14 tribes are recognized. We reinstate the genus Microctonus belonging to the tribe Perilitini, and synonymize Ussuraridelus with Holdawayella, Sinuatophorus with Eucosmophorus. Furthermore, we propose the following tribal rearrangements: Spathicopis and Stenothremma are transferred to Perilitini; Tuberidelus, Eucosmophorus and Plynops to Cosmophorini; Ecclitura to Dinocampini; Chrysopophthorus, Holdawayella and Wesmaelia to Helorimorphini; Proclithroporus and Heia to Townesilitini. The monotypic tribe Cryptoxilonini is synonymized with Cosmophorini. The genera Pygostolus and Litostolus are placed in a separate tribe, Pygostolini, previously recognized as a subtribe among the Centistini. Parsimony‐based ancestral state reconstructions suggest that the ancestor of Euphorinae was a parasitoid of lepidopteran larvae, and that a host shift to larval Coleoptera occurred only in one clade of the Meteorini, some members of which secondarily shifted back to larval lepidopteran hosts. In the remainder of the subfamily, there was an initial shift from larval to adult coleopterans, followed by subsequent shifts to adults or larvae of Hemiptera, Hymenoptera, Neuroptera, Orthoptera and Psocoptera.     

Rapid recovery of mammal fauna in the central Kimberley,northern Australia,following the removal of introduced herbivores

Australia has lost more native mammal species than any other country in the past two centuries, and this record of loss looks likely to worsen over the next few decades. Small‐ to medium‐sized mammals are declining in both distribution and density across large tracts of northern Australia's tropical savannas, including within protected areas. The most likely causes are a combination of changed fire patterns, the impacts of introduced herbivores and predation by feral cats. Here, in contrast to the prevailing trend across northern Australia, we report the recovery of native mammals in response to a large‐scale (>40 000 ha) destocking experiment carried out at Mornington Wildlife Sanctuary in the central Kimberley, north‐west Australia. Following the removal of introduced herbivores from 2004, the species richness and abundance of small native rodents and dasyurids increased significantly across all sampled habitats over the next 3 years. We discuss the implications of these results for guiding land management and applied research to help to reduce the impending risk of mammalian extinctions in northern Australia.