Dominant (AFLP) and co‐dominant (microsatellite) markers for the kelp Postelsia palmaeformis (Laminariales)

To aid in understanding the structure, dispersal and genetic dynamics of their populations, we developed microsatellite and amplified fragment length polymorphism (AFLP) markers for the sea palm, Postelsia palmaeformis (Laminariales) for samples taken from nine sites in the area of Cape Flattery, Washington State, USA. We identified two AFLP primers that yielded 798 variable fragments and five microsatellite markers with three to seven alleles each. We also report patterns of allelic variation for four previously identified microsatellite markers in this species and several new alleles.     

Effects of US 1 Project on Florida Key Deer Mortality

ABSTRACT Approximately 26% of annual mortality for the endangered Florida Key deer (Odocoileus virginianus clavium) occurs as deer-vehicle collisions (DVCs) on the 5.6-km section of United States Highway 1 (US 1) on Big Pine Key (BPK), but extensive urban development adjacent to sections of US 1 complicates efforts to reduce DVCs. Our objective was to evaluate the effectiveness of the US 1 Project (continuous 2.6-km system of 2.4-m fencing, 2 underpasses, and 4 experimental deer guards constructed on US 1 on BPK) in reducing DVCs along US 1. Deer used the underpasses all 3 postproject years (2003–2005); however, we observed higher underpass use in 2004 and 2005 compared to 2003. Exclusion fencing reduced deer intrusions onto the fenced section of US 1 during the 3-year period (2003, n = 7 deer; 2004, n = 4; 2005, n = 12). With a reduction of deer intrusions onto this section of US 1, DVCs decreased in the fenced area by 73–100%; however, US 1 DVCs within the unfenced sections of US 1 also increased (40%) as expected. In controlling for effects of increasing deer density and traffic volume, study results suggest that highway improvements have decreased the net risk of DVCs along US 1, which indicates that use of deer fencing, deer guards, and underpasses is applicable in other urban communities experiencing unacceptable levels of DVCs.     

Cougar Prey Selection in a White-Tailed Deer and Mule Deer Community

Abstract Widespread mule deer (Odocoilus hemionous) declines coupled with white-tailed deer (O. virginianus) increases prompted us to investigate the role of cougar (Puma concolor) predation in a white-tailed deer, mule deer, and cougar community in northeast Washington, USA. We hypothesized that cougars select for and disproportionately prey on mule deer in such multiple-prey communities. We estimated relative annual and seasonal prey abundance (prey availability) and documented 60 cougar kills (prey usage) from 2002 to 2004. White-tailed deer and mule deer comprised 72% and 28% of the total large prey population and 60% and 40% of the total large prey killed, respectively. Cougars selected for mule deer on an annual basis (α_md = 0.63 vs. α_wt = 0.37; P = 0.066). We also detected strong seasonal selection for mule deer with cougars killing more mule deer in summer (α_md = 0.64) but not in winter (α_md = 0.53). Cougars showed no seasonal selection for white-tailed deer despite their higher relative abundance. The mean annual kill interval of 6.68 days between kills varied little by season (winter = 7.0 days/kill, summer = 6.6 days/kill; P = 0.78) or prey species (white-tailed deer = 7.0 days/kill, mule deer = 6.1 days/kill; P = 0.58). Kill locations for both prey species occurred at higher elevations during summer months (summer = 1,090 m, winter = 908 m; P = 0.066). We suspect that cougars are primarily subsisting on abundant white-tailed deer during winter but following these deer to higher elevations as they migrate to their summer ranges, resulting in a greater spatial overlap between cougars and mule deer and disproportionate predation on mule deer.     

Growth and Photosynthetic Characteristics of Two Biotypes of the Weed Black-grass (Alopecurus myosuroides Huds.) Resistant and Susceptible to the Herbicide Chlorotoluron

Response of two biotypes of black-grass (Alopecurus myosuroidesHuds.) to the herbicide, chlorotoluron, was characterized inglasshouse and laboratory studies. ED₅₀values, defined as theamount (kg active ingredient ha^-1) of chlorotoluron requiredto reduce fresh mass by 50% under standard conditions, weredetermined for a resistant biotype (39.3 kg a.i. ha^-1) collectedfrom Peldon, Essex, UK and a susceptible biotype (0.93 kg a.i.ha^-1) obtained commercially, giving a resistance factor of 42.The resistance factor was calculated as the ratio of ED₅₀valuesand describes the increase in amount of herbicide needed toreduce fresh mass by 50% in the resistant, compared to the susceptible,biotype. Resistance was further characterized by measurementsof whole plant growth and photosynthesis. Relative growth rate,number of tillers, leaf area and mean fresh mass were the samein untreated plants of both biotypes, and rates of photosynthesisat both high and low photon flux were similar, with no differencein apparent quantum yield. Photosynthesis by whole plants wasstudied over a 24 h period following chlorotoluron treatment.Resistant plants showed no reduction in photosynthesis overthis period, whereas photosynthesis by susceptible plants ceased10 h after treatment and did not recover. Alopecurus myosuroides ; black-grass; herbicide resistance; chlorotoluron     

Isolation and characterization of 17 new microsatellite markers for the ember parrotfish Scarus rubroviolaceus,and cross‐amplification in four other parrotfish species

We describe the isolation and characterization of 17 polymorphic microsatellite loci for the ember parrotfish Scarus rubrioviolaceus. In a Hawaiian sample of 69 fish, we found between three and 20 alleles per locus, and observed heterozygosity ranging from 0.283 to 0.896. Four of these loci consistently cross‐amplified in the stareye parrotfish Calotomus carolinus, the spectacled parrotfish Chlorurus perspicillatus, the palenose parrotfish Scarus psittacus, and the bullethead parrotfish Chlorurus sordidus, but others gave mixed results. These loci will be useful for describing mating systems and population structure in marine species with broad dispersal potential that play key ecological roles in tropical environments.     

Atyid shrimps (Decapoda: Atyidae) influence the spatial heterogeneity of algal communities over different scales in tropical montane streams, Puerto Rico

1. Atyid (Decapoda: Atyidae) shrimps influence the distribution of algal communities over different scales in tropical montane streams of Puerto Rico. Within pools of an atyid-dominated stream, atyid shrimps enhanced patchiness in algal communities along the depth gradient. Algal bands occurred in shallow pool margins where atyids did not forage (< 3 cm below water surface), with significantly greater standing crop, taxon richness, and structural complexity than deeper areas. In deeper water, atyids reduced small-scale patchiness in algal community composition and maintained a low-growing understorey turf dominated by sessile diatoms (Bacillariophyta) and, sometimes, closely cropped, filamentous blue-greens (Cyanophyta).
2. Among pools of the atyid-dominated stream, atyids interacted with light to determine algal patchiness between stream margins and deeper areas. In sunny pools, algal standing crop was 140-fold greater in pool margins than in deeper areas where atyids foraged. In shaded pools, however, standing crop in pool margins was only 5-fold greater than in deeper areas. Effects of light on algal standing crop were greater outside atyid foraging areas than within, indicating that shrimp grazing overrides the positive effects of light.
3. In contrast to the atyid-dominated stream, algal communities in an atyid-poor stream were characterized by a high biomass of loosely attached epipelic diatoms and no depth zonation. Interstream rock and shrimp transplant experiments indicated that atyids significantly reduced algal standing crop and altered community composition on rocks from atyid-poor streams within 24 h. Results support the hypothesis that atyid shrimps play a major role in determining observed interstream differences in algal communities.     

Of glaciers and refugia: a decade of study sheds new light on the phylogeography of northwestern North America

Glacial cycles have played a dominant role in shaping the genetic structure and distribution of biota in northwestern North America. The two major ice age refugia of Beringia and the Pacific Northwest were connected by major mountain chains and bordered by the Pacific Ocean. As a result, numerous refugial options were available for the regions taxa during glacial advances. We reviewed the importance of glaciations and refugia in shaping northwestern North America’s phylogeographic history. We also tested whether ecological variables were associated with refugial history. The recurrent phylogeographic patterns that emerged were the following: (i) additional complexity, i.e. refugia within refugia, in both Beringia and the Pacific Northwest; and (ii) strong evidence for cryptic refugia in the Alexander Archipelago and Haida Gwaii, the Canadian Arctic and within the ice‐sheets. Species with contemporary ranges that covered multiple refugia, or those with high dispersal ability, were significantly more likely to have resided in multiple refugia. Most of the shared phylogeographic patterns can be attributed to multiple refugial locales during the last glacial maximum or major physiographic barriers like rivers and glaciers. However, some of the observed patterns are much older and appear connected to the orogeny of the Cascade‐Sierra chain or allopatric differentiation during historic glacial advances. The emergent patterns from this review suggest we should refine the classic Beringian‐southern refugial paradigm for northwestern North American biota and highlight the ecological and evolutionary consequences of colonization from multiple refugia.     

Climate change manipulations show Antarctic flora is more strongly affected by elevated nutrients than water

Climate change is expected to affect the high latitudes first and most severely, rendering Antarctica one of the most significant baseline environments for the study of global climate change. The indirect effects of climate warming, including changes to the availability of key environmental resources, such as water and nutrients, are likely to have a greater impact upon continental Antarctic terrestrial ecosystems than the effects of fluctuations in temperature alone. To investigate the likely impacts of a wetter climate on Antarctic terrestrial communities a multiseason, manipulative field experiment was conducted in the floristically important Windmill Islands region of East Antarctica. Four cryptogamic communities (pure bryophyte, moribund bryophyte, crustose and fructicose lichen‐dominated) received increased water and/or nutrient additions over two consecutive summer seasons. The increased water approximated an 18% increase in snow melt days (0.2°C increase in temperature), while the nutrient addition of 3.5 g N m^?2 yr^?1 was within the range of soil N in the vicinity. A range of physiological and biochemical measurements were conducted in order to quantify the community response. While an overall increase in productivity in response to water and nutrient additions was observed, productivity appeared to respond more strongly to nutrient additions than to water additions. Pure bryophyte communities, and lichen communities dominated by the genus Usnea, showed stronger positive responses to nutrient additions, identifying some communities that may be better able to adapt and prosper under the ameliorating conditions associated with a warmer, wetter future climate. Under such a climate, productivity is overall likely to increase but some cryptogamic communities are likely to thrive more than others. Regeneration of moribund bryophytes appears likely only if a future moisture regime creates consistently moist conditions.