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61.
Victoria Cavaliere Daniela L Papademetrio Mario Lorenzetti Pamela Valva María Victoria Preciado Patricia Gargallo Irene Larripa Mariela B Monreal María Laura Pardo Silvia E Hajos Guillermo AC Blanco élida MC álvarez 《Translational oncology》2009,2(1):46-58
Chemotherapy aims to limit proliferation and induce apoptotic cell death in tumor cells. Owing to blockade of signaling pathways involved in cell survival and proliferation, nuclear factor κB (NF-κB) inhibitors can induce apoptosis in a number of hematological malignancies. The efficacy of conventional chemotherapeutic drugs, such as vincristine (VCR) and doxorubicine (DOX), may be enhanced with combined therapy based on NF-κB modulation. In this study, we evaluated the effect of caffeic acid phenylethyl ester (CAPE) and MG-132, two nonspecific NF-κB inhibitors, and conventional chemotherapeutics drugs DOX and VCR on cell proliferation and apoptosis induction on a lymphoblastoid B-cell line, PL104, established and characterized in our laboratory. CAPE and MG-132 treatment showed a strong antiproliferative effect accompanied by clear cell cycle deregulation and apoptosis induction. Doxorubicine and VCR showed antiproliferative effects similar to those of CAPE and MG-132, although the latter drugs showed an apoptotic rate two-fold higher than DOX and VCR. None of the four compounds showed cytotoxic effect on peripheral mononuclear cells from healthy volunteers. CAPE- and MG-132-treated bone marrow cells from patients with myeloid and lymphoid leukemias showed 69% (P < .001) and 25% decrease (P < .01) in cell proliferation and 42% and 34% (P < .01) apoptosis induction, respectively. Overall, our results indicate that CAPE and MG-132 had a strong and selective apoptotic effect on tumor cells that may be useful in future treatment of hematological neoplasias. 相似文献
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Background
In microarray data analysis, factors such as data quality, biological variation, and the increasingly multi-layered nature of more complex biological systems complicates the modelling of regulatory networks that can represent and capture the interactions among genes. We believe that the use of multiple datasets derived from related biological systems leads to more robust models. Therefore, we developed a novel framework for modelling regulatory networks that involves training and evaluation on independent datasets. Our approach includes the following steps: (1) ordering the datasets based on their level of noise and informativeness; (2) selection of a Bayesian classifier with an appropriate level of complexity by evaluation of predictive performance on independent data sets; (3) comparing the different gene selections and the influence of increasing the model complexity; (4) functional analysis of the informative genes. 相似文献63.
Comparison of the effects of concentration, pH and anion species on astringency and sourness of organic acids 总被引:3,自引:1,他引:3
The separate effects of concentration, pH and anion species on intensity of
sourness and astringency of organic acids were evaluated. Judges rated
sourness and astringency intensity of lactic, malic, tartaric and citric
acid solutions at three levels of constant pH varying in normality and at
three levels of constant concentration varying in pH. To assess the
comparative sourness and astringency of the organic acid anions of study,
binary acid solutions matched in pH and titratable acidity were also rated.
As pH was decreased in equinormal solutions, both sourness and astringency
increased significantly (P < 0.001). By contrast, as the normality of
the equi-pH solutions was increased, only sourness demonstrated significant
increases (P < 0.001) while astringency remained constant or decreased
slightly. At the lowest normality tested, all solutions were more
astringent than sour (P < 0.05). Although lactic acid was found to be
significantly more sour than citric acid (P < 0.05), no other sourness
or astringency differences among the organic acid anions were noted. This
study demonstrates for the first time that astringency elicited by acids is
a function of pH and not concentration or anion species, and confirms that
sourness is independently influenced by concentration, pH and anion species
of the acid.
相似文献
64.
Background
The rapid and accurate identification of species is a critical component of large-scale biodiversity monitoring programs. DNA arrays (micro and macro) and DNA barcodes are two molecular approaches that have recently garnered much attention. Here, we compare these two platforms for identification of an important group, the mammals. 相似文献65.
Igor Y Oshkin David AC Beck Andrew E Lamb Veronika Tchesnokova Gabrielle Benuska Tami L McTaggart Marina G Kalyuzhnaya Svetlana N Dedysh Mary E Lidstrom Ludmila Chistoserdova 《The ISME journal》2015,9(5):1119-1129
We report observations on the dynamics of bacterial communities in response to methane stimulus in laboratory microcosm incubations prepared with lake sediment samples. We first measured taxonomic compositions of long-term enrichment cultures and determined that, although dominated by Methylococcaceae types, these cultures also contained accompanying types belonging to a limited number of bacterial taxa, methylotrophs and non-methylotrophs. We then followed the short-term community dynamics, in two oxygen tension regimens (150 μM and 15 μM), observing rapid loss of species diversity. In all microcosms, a single type of Methylobacter represented the major methane-oxidizing partner. The accompanying members of the communities revealed different trajectories in response to different oxygen tensions, with Methylotenera species being the early responders to methane stimulus under both conditions. The communities in both conditions were convergent in terms of their assemblage, suggesting selection for specific taxa. Our results support prior observations from metagenomics on distribution of carbon from methane among diverse bacterial populations and further suggest that communities are likely responsible for methane cycling, rather than a single type of microbe. 相似文献
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The sugar binding activity of MR60, a mannose-specific shuttling lectin, requires a dimeric state 总被引:1,自引:0,他引:1
MR60 is an intracellular membrane protein which has been shown to act as a
mannoside specific lectin and to be identical to ERGIC-53, a protein
characteristic of the endoplasmic reticulum-Golgi apparatus- intermediate
compartment, acting as a shuttle. According to its primary sequence, this
MR60/ERGIC-53 protein contains a luminal domain including the carbohydrate
recognition domain, a stem, a transmembrane segment and a cytosolic domain.
The endogenous MR60/ERGIC-53 protein is spontaneously oligomeric, (dimers
and hexamers). In this paper, we study the relationship between the
oligomerization state and the sugar binding capacity by using recombinant
proteins. The expression of the recombinant proteins was evidenced by
immunocytochemistry and by immunoprecipitation followed by SDS-PAGE
analysis. The full size recombinant protein binds mannosides and is
oligomeric, up to the hexameric form. Two truncated proteins lacking the
transmembrane and the cytosolic domains were prepared and characterized. A
long one, containing the cysteine 466 close to the C-terminal end of the
recombinant protein but lacking the cysteine 475, close to the C- terminal
end of the native protein, does bind mannosides and forms dimers but no
higher oligomeric forms. A shorter one, lacking both the cysteines 466 and
475, does not bind mannosides and does not form dimers or higher polymers.
The two cysteines in the carbohydrate recognition domain (C190 and C230)
are not involved in the stabilization of oligomers. In conclusion, this
study shows that the luminal moiety of MR60/ERGIC-53 contains a device
allowing both its oligomeric pattern and its sugar binding capability.
相似文献
69.
Patterns of ribosomal RNA evolution in salamanders 总被引:4,自引:0,他引:4
Sequence comparisons are presented for four segments of the large subunit
of ribosomal RNA, including divergent domains D7a and D7b, portions of the
large divergent domains D2, D3, and D8, and evolutionarily conservative
sequences flanking divergent domains. These results resolve phylogenetic
relationships among exemplars of seven families of salamanders and the
three amphibian orders. Phylogenetic analysis confirms the prediction that
divergent domains feature the highest relative rates of base substitution
and length variation within the ribosome, but the divergent domains evolve
more slowly than nuclear noncoding DNA and the silent sites of structural
genes. Base substitutions demonstrate approximately twice as many
transitions as transversions and an uneven distribution among sites within
the divergent domains but no apparent bias in base composition. Length
mutations are primarily small insertions and deletions, with deletions
predominating. The divergent domains appear to be a good source of
phylogenetic information for evolutionary events occurring approximately
100-200 million years ago.
相似文献
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