Influence of ecological factors on the growth of crustaceans from the genus Artemia in Ural and Siberian populations

A morphometric analysis of crustaceans from the genus Artemia inhabiting nine Ural and Siberian populations has been carried out. An effect of the total mineralization of water reservoirs and some ions on the characteristics of Artemia growth has been discovered. The number of setae on furca and its length are most affected by the factors under consideration. A trend toward a decrease in the manifestation of fluctuating asymmetry alongside an increase in the total mineralization of water reservoirs has been found.     

Luciferase-based transgenic recombination assay is more sensitive than beta-glucoronidase-based

Study of the DNA repair and genome stability in plants is directly dependent on the availability of an easy, inexpensive, and reliable assay. Marker gene-based homologous recombination (HR) assays were introduced more than a decade ago and have been intensively used ever since. Here, we compared several transgenic Arabidopsis and tobacco lines that carried in their genome the luciferase (LUC) or the beta-glucoronidase (uidA or GUS) substrates for HR. The average recombination frequency detected with the luciferase transgene was nearly 9.0-fold higher in Arabidopsis and 12.4-fold higher in tobacco plants. Importantly, both transgenes were under the control of 35S promoter and had similar expression levels throughout the plants. Irradiation with UVC increased the HR frequency similarly in both transgenes. The actual difference in the frequency of HR in Arabidopsis and tobacco possibly results from differing sensitivity to detection of transgene activity. Thus, we could suggest that luciferase recombination assay, due to its higher sensitivity, should be the assay of choice when plant genome stability is studied.     

The genus Biuterina Fuhrmann, 1902 (Cestoda,Paruterinidae) in the Old World: redescriptions of four species from Afrotropical Passeriformes

Four species of Biuterina Fuhrmann, 1902 (Cestoda, Cyclophyllidea, Paruterinidae), originally described from Afrotropical passeriform birds, are redescribed and figured on the basis of their type-specimens. These are B. pentamyzos (Mettrick, 1960) from Prionops plumata (Laniidae) in Zimbabwe, B. quelea (Mettrick, 1963) from Quelea quelea (Ploceidae) in Zimbabwe, B. ugandae Baylis, 1919 from Chalcomitra senegalensis (Nectariniidae) in Uganda and B. zambiensis (Mettrick, 1960) from Campephaga flava (Campephagidae) in Zimbabwe. The rostellum of B. quelea is a spherical structure filled with strongly-developed glandular tissue and possessing a weak musculature. The remaining three species have a sucker-like rostellar apparatus with moderately developed glandular tissue in the rostellum and around it. It is considered that the glandular elements are an inherent part of the rostellar apparatus of the paruterinids. An armament consisting of fine, punctiform, spine-like structures arranged in transverse rows on the inner surface of suckers is observed in B. pentamyzos. This is the first record of sucker armature in the Paruterinidae.     

The role of water lichens in the biogeochemical processes in the Lake Baikal stony littoral

Water crustose lichens of g. Verrucaria (V. scabra Vězda, V. rheitrophyla Zsch., V. maura Wahlenb. in Ach., and V. hydrela Ach.) and water foliose lichen Collema ramenskii Elenk. were studied in the stony littoral of the western coast of Lake Baikal in 2002–2006. Their densities were highest at depths of 1.5 to 2 m; 95–100% of rock fragments collected from the depths of 1.5–2.2 m were covered by plentiful crustose thalli of Verrucaria spp. Lichens make a large contribute to the destruction of the stony ground in the shallow-water zone. Unlike water, foliose and crustose lichens concentrate Ti, La, Ce, Y, Mn, and Th. Thalli of Collema ramenskii differ from Verrucaria species in their ability to accumulate Zn, Co, and Ni. Compared to the bottom sediments, all the studied water lichen species concentrate Zn, while Collema ramenskiiconcentrate Zn and Mo.     

Coassembly and complementation of Gag proteins from HIV-1 and HIV-2, two distinct human pathogens

Approximately one million people in the world are dually infected with both HIV-1 and HIV-2. To identify potential interactions between these two human pathogens, we examined whether HIV-1 and HIV-2 Gag proteins can coassemble and functionally complement each other. We generated HIV-1- and HIV-2-based vectors with mutations in Gag; compared with wild-type vectors, these mutants had drastically decreased viral titers. Coexpression of the mutant HIV-1 and HIV-2 Gag could generate infectious viruses; furthermore, heterologous complementation in certain combinations showed efficiency similar to homologous complementation. Additionally, we used bimolecular fluorescence complementation analysis to directly demonstrate that HIV-1 and HIV-2 Gag can interact and coassemble. Taken together, our results indicate that HIV-1 and HIV-2 Gag polyproteins can coassemble and functionally complement each other during virus replication; to our knowledge, this is the first demonstration of its kind. These studies have important implications for AIDS treatment and the evolution of primate lentiviruses.     

Description of Triaenorhina burti n. sp. (Cestoda: Paruterinidae) from the Malabar trogon Harpactes fasciatus (Pennant) (Aves: Trogoniformes: Trogonidae) in Sri Lanka

Triaenorhina burti n. sp. (Cyclophyllidea: Paruterinidae) is described from Harpactes fasciatus (Trogoniformes: Trogonidae) from the Southern Province of Sri Lanka. The new species is characterised by: a body 24–32 mm long; 44 rostellar hooks alternating in two closely adjacent regular rows, with lengths of 63–65 μm (anterior row) and 39–41 μm (posterior row); regularly alternating genital pores; testes divided into two groups by the ovary and vitellarium; a gravid uterus forming a single oval sac; and a cylindrical paruterine organ not reaching the anterior proglottis margin. A key to the seven recognised species of Triaenorhina Spasskii & Shumilo, 1965 is presented.     

The erection of Pelecanema n. g. (Nematoda: Spirurida: Acuariidae), with redescriptions of P. sirry (Khalil, 1931) n. comb. and P. pelecani (Johnston & Mawson, 1942) n. comb.

Pelecanema n. g. is erected for P. sirry (Khalil, 1931) n. comb., syn. Synhimantus sirry Khalil, 1931 (type-species) and P. pelecani (Johnston & Mawson, 1942) n. comb., syn. Dispharynx pelecani Johnston & Mawson, 1942. In the structure of its cordons, consisting of two rows of delicate cuticular plates, the new genus is similar to Synhimantus Railliet, Henry & Sisoff, 1912, Dispharynx Railliet, Henry & Sisoff, 1912, Chordatortilis Machado de Mendon?a & Olivera de Rodrigues, 1965 and Parachordatortilis Mutafchiev, Santoro & Georgiev, 2010. Pelecanema sirry, a parasite of Pelecanus onocrotalus L. and P. crispus Bruch (Pelecaniformes, Pelecanidae) in Africa (Egypt and Senegal) and Europe (Ukraine and Bulgaria), is redescribed using light and scanning electron microscopy on the basis of specimens from P. crispus from Bulgaria. Pelecanema pelecani, a parasite of Pelecanus conspicillatus Temminck in Australia, is also redescribed using light microscopy on the basis of specimens from its type-host and type-locality. In contrast to a previous opinion recognising Pelecanema sirry and P. pelecani as synonyms, the two species are considered distinct and P. pelecani is validated.     

Assessing the evolutionary impact of amino acid mutations in the human genome

Quantifying the distribution of fitness effects among newly arising mutations in the human genome is key to resolving important debates in medical and evolutionary genetics. Here, we present a method for inferring this distribution using Single Nucleotide Polymorphism (SNP) data from a population with non-stationary demographic history (such as that of modern humans). Application of our method to 47,576 coding SNPs found by direct resequencing of 11,404 protein coding-genes in 35 individuals (20 European Americans and 15 African Americans) allows us to assess the relative contribution of demographic and selective effects to patterning amino acid variation in the human genome. We find evidence of an ancient population expansion in the sample with African ancestry and a relatively recent bottleneck in the sample with European ancestry. After accounting for these demographic effects, we find strong evidence for great variability in the selective effects of new amino acid replacing mutations. In both populations, the patterns of variation are consistent with a leptokurtic distribution of selection coefficients (e.g., gamma or log-normal) peaked near neutrality. Specifically, we predict 27–29% of amino acid changing (nonsynonymous) mutations are neutral or nearly neutral (|s|<0.01%), 30–42% are moderately deleterious (0.01%<|s|<1%), and nearly all the remainder are highly deleterious or lethal (|s|>1%). Our results are consistent with 10–20% of amino acid differences between humans and chimpanzees having been fixed by positive selection with the remainder of differences being neutral or nearly neutral. Our analysis also predicts that many of the alleles identified via whole-genome association mapping may be selectively neutral or (formerly) positively selected, implying that deleterious genetic variation affecting disease phenotype may be missed by this widely used approach for mapping genes underlying complex traits.