象山港不同养殖类型海域大型底栖动物群落比较研究

于2009年2月在象山港顶部海域分别对海带、牡蛎和鱼类网箱3种不同养殖区进行了大型底栖动物调查。调查共鉴定大型底栖动物73种,隶属8门12纲53科,以软体动物和环节动物为主。海带养殖区优势种有5种;牡蛎养殖区有4种;网箱养殖区有9种。海带、牡蛎和网箱养殖区大型底栖动物平均栖息密度分别为(132±71)个/m²、(94±91)个/m²和(210±132)个/m²;平均生物量分别为(26.51±11.06) g/m²、(53.03±61.94) g/m²和(108.80±73.56) g/m²。栖息密度和生物量不同养殖区和不同调查站位间差异显著。Tukey多重比较结果显示,栖息密度海带养殖区与牡蛎和网箱养殖区间均无显著差异,而牡蛎与鱼类网箱养殖区间存在显著差异;生物量海带养殖区与牡蛎养殖区间无显著差异,海带养殖区和牡蛎养殖区与网箱养殖区间均显著差异。典范对应分析结果表明,对大型底栖动物群落起主要影响的环境因子有温度、盐度、总氮和总磷等,排序轴对物种-环境关系的贡献率计算结果表明环境变量可以较好的解释主要类群的变化情况。丰度/生物量比较曲线(ABC曲线)分析结果表明,网箱养殖区大型底栖动物群落受较明显扰动,而海带和牡蛎养殖区大型底栖动物群落未受扰动。     

Spatial phylogenetics of the Chinese angiosperm flora provides insights into endemism and conservation

The flora of China is well known for its high diversity and endemism. Identifying centers of endemism and designating conservation priorities are essential goals for biodiversity studies.However, there is no comprehensive study from a rigorous phylogenetic perspective to understand patterns of diversity and endemism and to guide biodiversity conservation in China. We conducted a spatial phylogenetic analysis of the Chinese angiosperm flora at the generic level to identify centers of neo-and pale...     

缺氧预适应研究的进展与展望

缺氧预适应这一生物进化上的内源性细胞保护机制,可被机体、器官、组织和细胞的重复缺氧暴露所激发。缺氧预适应的效应已由对重复缺氧局部／原位器官组织的保护（局部／原位缺氧预适应）发展到既保护远隔的各种异位器官组织（远程／异位缺氧预适应）又抗御其它种种非缺氧性应激（交叉／多能缺氧预适应）。在现有进展的基础上,缺氧预适应研究以及其可操作性和可应用性将有更大的发展空间。     

c-Ski/SnoN与肾间质纤维化

c-Ski／SnoN是由原癌基因c-ski／sno编码的核蛋白,属于Ski家族成员。近年来有研究表明c-Ski／SnoN是TGF-β1／Smad信号通路的重要负性调控因子,通过与Smad蛋白相互作用来抑制TGF-β1靶基因的活化。本文就c-Ski／SnoN对TGF-β1／Smad信号通路的调节作用,以及在肾间质纤维化的发生发展中的作用及机制作一综述。     

Astrocyte ethanol exposure reveals persistent and defined calcium response subtypes and associated gene signatures

Astrocytes play a critical role in brain function, but their contribution during ethanol (EtOH) consumption remains largely understudied. In light of recent findings on the heterogeneity of astrocyte physiology and gene expression, an approach with the ability to identify subtypes and capture this heterogeneity is necessary. Here, we combined measurements of calcium signaling and gene expression to define EtOH-induced astrocyte subtypes. In the absence of a demonstrated EtOH receptor, EtOH is believed to have effects on the function of many receptors and downstream biological cascades that underlie calcium responsiveness. This mechanism of EtOH-induced calcium signaling is unknown and this study provides the first step in understanding the characteristics of cells displaying these observed responses. To characterize underlying astrocyte subtypes, we assessed the correlation between calcium signaling and astrocyte gene expression signature in response to EtOH. We found that various EtOH doses increased intracellular calcium levels in a subset of astrocytes, distinguishing three cellular response types and one nonresponsive subtype as categorized by response waveform properties. Furthermore, single-cell RNA-seq analysis of astrocytes from the different response types identified type-enriched discriminatory gene expression signatures. Combining single-cell calcium responses and gene expression analysis identified specific astrocyte subgroups among astrocyte populations defined by their response to EtOH. This result provides a basis for identifying the relationship between astrocyte susceptibility to EtOH and corresponding measurable markers of calcium signaling and gene expression, which will be useful to investigate potential subgroup-specific influences of astrocytes on the physiology and pathology of EtOH exposure in the brain.     

合成己酸乙酯脂肪酶产生菌的筛选及产酶条件

从２７株脂肪酶产生菌中筛选到能由乙醇和己酸合成己酸乙酯的菌株８株。其中Ｒｈｉｚｏｐｕｓｓｐ．Ｈ－３菌株脂肪酶活力为５０－６０ｕ／ｍｌ,全细胞在有机溶剂中的酯化率可达己酸的９１％。Ｈ３产酶的最适碳源为淀粉或葡萄糖。６％黄豆饼粉加４％蛋白陈复合氮源有利于酶活力的增加。     

普生轮藻浸提液对两种淡水藻类的化感抑制作用及其数学模型

利用大型水生植物的化感作用抑制水华藻类是水域生态学研究的热点课题之一。探讨了不同浓度普生轮藻浸提液对产毒铜绿微囊藻和斜生栅藻(单纯以及混合藻类)的抑制作用,并根据实验过程中得到的数据和数据特征,在传统的Logistic模型和Lotka-Volterra模型基础上,通过微元法建立了普生轮藻浸提液对单纯产毒铜绿微囊藻、单纯斜生栅藻抑制的数学模型以及两藻混合时抑制的数学模型。结果表明,(1)普生轮藻浸提液无论对单独的毒性铜绿微囊藻或斜生栅藻还是共生状态的毒性铜绿微囊藻和斜生栅藻均有很强抑制作用,且对毒性铜绿微囊藻的抑制作用要显著高于对斜生栅藻;(2)所建立的抑藻模型可有效表征和预测在一定范围内的产毒铜绿微囊藻、斜生栅藻及其混合藻在普生轮藻浸提液胁迫下藻密度随时间变化的规律;通过这些模型可方便地计算出实验期间任何时间节点上普生轮藻浸提液的半抑制浓度(EC50)、最小有效浓度(MIC)等指标的预测值、混合藻在小生境中相对稳定时的预测值等等。该研究可为实际抑藻的方案制定和实施提供有价值的数据支撑和参考,具有一定的理论与应用意义。     

Selective pericentromeric heterochromatin dismantling caused by TP53 activation during senescence

Cellular senescence triggers various types of heterochromatin remodeling that contribute to aging. However, the age-related mechanisms that lead to these epigenetic alterations remain elusive. Here, we asked how two key aging hallmarks, telomere shortening and constitutive heterochromatin loss, are mechanistically connected during senescence. We show that, at the onset of senescence, pericentromeric heterochromatin is specifically dismantled consisting of chromatin decondensation, accumulation of DNA breakages, illegitimate recombination and loss of DNA. This process is caused by telomere shortening or genotoxic stress by a sequence of events starting from TP53-dependent downregulation of the telomere protective protein TRF2. The resulting loss of TRF2 at pericentromeres triggers DNA breaks activating ATM, which in turn leads to heterochromatin decondensation by releasing KAP1 and Lamin B1, recombination and satellite DNA excision found in the cytosol associated with cGAS. This TP53–TRF2 axis activates the interferon response and the formation of chromosome rearrangements when the cells escape the senescent growth arrest. Overall, these results reveal the role of TP53 as pericentromeric disassembler and define the basic principles of how a TP53-dependent senescence inducer hierarchically leads to selective pericentromeric dismantling through the downregulation of TRF2.