短嘴金丝燕回声定位叫声特征

2012年6月,对湖南省石门县壶瓶山国家级自然保护区神景洞短嘴金丝燕的回声定位叫声进行研究,在黑暗山洞内使用录音仪器录制其自由飞行状态的声音后使用声音软件进行分析.短嘴金丝燕捕食归巢时,快速飞入洞口,在洞内有光区域不发声,到达洞内黑暗区域后开始发出回声定位叫声,且飞行速度减慢.声音分析结果表明其回声定位叫声为双脉冲组的噪声脉冲串型(noise burst),组内脉冲间隔很短[(6.6±0.42)ms],组间脉冲间隔较长[(99.3±3.86) ms],两者差异显著(P＜0.01).对比第一、第二脉冲声音参数发现,主频和脉冲时程差异不显著,第一、第二脉冲主频分别为(6.2±0.08) kHz和(6.2±0.10) kHz (P＞0.05);脉冲时程分别为(2.9±0.12) ms和(3.2±0.17) ms (P＞0.05);最高和最低频率差异显著,第一、第二脉冲最高频率分别为(20.1±1.10) kHz和(15.4±0.98) kHz (P＜0.01),最低频率分别为(3.7±0.12) kHz和(4.0±0.09)kHz (P＜0.05);第一脉冲频宽((16.5±1.17) kHz)宽于第二脉冲((11.4±1.01) kHz) (P＜0.01);且第一脉冲能量[(-32.5±0.60) dB]高于第二脉冲[(-35.2±0.94) dB] (P＜0.05).另外,短嘴金丝燕在黑暗山洞内的回声定位叫声还包含了部分超声波,最高频率可达33.2 kHz.     

黔中喀斯特山地不同森林类型的地表径流及影响因素

采用固定样地定位监测方法,于2001-2005年研究了黔中喀斯特山地不同森林类型对地表径流的影响。结果表明,不同林分类型的年地表径流量均值为11.108mm、林分类型间变幅为1.765-22.934mm、年际间变幅为10.553-11.699mm,退耕还林幼林(22.934mm)>针叶林(17.236mm)>针阔混交林(10.770mm)>阔叶林(8.876mm)。不同森林类型年地表径流量的季节变化为夏季>春季>秋季>冬季,同降雨量的季节变化趋势相一致。与同生物气候带、不同生物气候带森林相近类型的径流量规律相似,反映出黔中喀斯特山地森林与其它森林地表径流量规律的相似性。其中喀斯特山地森林中灌木林地表径流量与其它地带性和非地带性森林中灌木林地表径流量变化的相异性又反映出黔中喀斯特山地森林地表径流的特殊性,这种特殊性主要是成土母岩造成的。地表径流系数的季节变化趋势中,退耕还林幼林为夏季>春季>秋季>冬季,针叶林和针阔混交林为夏季>春季>冬季>秋季,灌木林和阔叶林为春季>夏季>冬季>秋季,这种差异与不同林分类型组成树种的生活型有关。旬地表径流量与反映温度和水分的气象指标间的单相关性达显著水平,多元回归方程模拟表明衡量温度的相关指标对地表径流量的贡献率高于降水,这反映了温度对近地气团的控制作用,进而影响区域降水和林地径流量。森林不同层片特征对地表径流量的影响具有互补性和抑制性,受森林群落组成、结构和发育的共同影响。年地表径流量受小生境和林地表层土壤特性的综合影响,地表径流量随坡度的增大而增加、随海拔的升高而降低,与毛管孔隙度和总孔隙度的负相关性达显著水平,多元回归方程模拟发现容重的贡献率达-96.54%。     

Phosphorylation of a 25 kDa protein is induced by thermostable direct hemolysin of Vibrio parahaemolyticus

Thermostable direct hemolysin (TDH) is a possible virulence factor produced by Vibrio parahaemolyticus. Although TDH has a variety of biological activities, including hemolytic activity, the biochemical mechanism of action remains uncertain. Here we analysed biochemical events, especially phosphorylation, caused by TDH in erythrocytes, and found that TDH caused significant phosphorylations of proteins on erythrocyte membrane. Phosphorylation of proteins was studied using γ-³²P ATP and SDS-PAGE. A number of protein kinase inhibitors were tested, to determine which types of kinases were involved in the phosphorylation events. TDH induced the phosphorylation of two proteins on membranes of human erythrocyte that are sensitive to TDH. The estimated molecular weight of these proteins was 25 and 22.5 kDa. Interestingly, the 22.5 kDa, but not the 25 kDa protein, was phosphorylated on the membrane of TDH-insensitive (resistant) horse erythrocytes. Moreover, a mutant TDH (R7), which retained binding ability but lost hemolytic activity, also phosphorylated only the 22.5 kDa protein on human erythrocyte membranes. Among the protein kinase inhibitors used the protein kinase C inhibitors, (staurosporine and calphostin C) showed marked inhibition of phosphorylation of 25 kDa protein. In addition to phosphorylation, these protein kinase C inhibitors suppresssed hemolysis by TDH. These results indicate that the phosphorylation of the 25 kDa protein seems to be essential for the hemolysis by TDH after it binds to erythrocyte membranes.     

Effects of size,neighbors, and site condition on tree growth in a subtropical evergreen and deciduous broad‐leaved mixed forest,China

Successful growth of a tree is the result of combined effects of biotic and abiotic factors. It is important to understand how biotic and abiotic factors affect changes in forest structure and dynamics under environmental fluctuations. In this study, we explored the effects of initial size [diameter at breast height (DBH)], neighborhood competition, and site condition on tree growth, based on a 3‐year monitoring of tree growth rate in a permanent plot (120 × 80 m) of montane Fagus engleriana–Cyclobalanopsis multiervis mixed forest on Mt. Shennongjia, China. We measured DBH increments every 6 months from October 2011 to October 2014 by field‐made dendrometers and calculated the mean annual growth rate over the 3 years for each individual tree. We also measured and calculated twelve soil properties and five topographic variables for 384 grids of 5 × 5 m. We defined two distance‐dependent neighborhood competition indices with and without considerations of phylogenetic relatedness between trees and tested for significant differences in growth rates among functional groups. On average, trees in this mixed montane forest grew 0.07 cm year^?1 in DBH. Deciduous, canopy, and early‐successional species grew faster than evergreen, small‐statured, and late‐successional species, respectively. Growth rates increased with initial DBH, but were not significantly related to neighborhood competition and site condition for overall trees. Phylogenetic relatedness between trees did not influence the neighborhood competition. Different factors were found to influence tree growth rates of different functional groups: Initial DBH was the dominant factor for all tree groups; neighborhood competition within 5 m radius decreased growth rates of evergreen trees; and site condition tended to be more related to growth rates of fast‐growing trees (deciduous, canopy, pioneer, and early‐successional species) than the slow‐growing trees (evergreen, understory, and late‐successional species).     

一次陆源降雨污水引起血红哈卡藻赤潮的成因

以2007年烟台四十里湾海域血红哈卡藻(Akashiwo sanguinea Hirasaka)赤潮为对象,研究赤潮消长与水环境因子的关系。研究发现大量陆源降雨污水输入后,海水盐度急剧下降、营养盐大幅增加,特别是活性磷酸盐浓度明显增加,促进了血红哈卡藻的生长繁殖并最终形成赤潮。赤潮发生前海区第一优势种为尖刺拟菱形藻(Pseudo-nitzschia pungens Halse),优势度0.47(0.42—0.52),多样性指数2.63(2.43—2.89);赤潮发生时血红哈卡藻密度范围1.05×105—4.10×106个/L,优势度0.92(0.83—0.99),多样性指数0.27(0.15—0.64);赤潮消退后中肋骨条藻(Skeletonema costatum Cleve)为第一优势种,优势度0.49(0.43—0.55),多样性指数2.46(2.19—2.84)。赤潮的发生、发展、消亡与化学需氧量(COD)、无机氮(DIN)、活性磷酸盐(DIP)、富营养化指数(E)呈显著正相关(P<0.05),与盐度呈显著负相关(P<0.01)。赤潮前、后该海域为贫营养、P限制、叶绿素a含量中等,赤潮期间该海域为富营养、P限制、叶绿素a含量高。通过影响力评定,活性磷酸盐、COD、盐度是此次赤潮发生的主要诱发因子,当活性磷酸盐含量低于0.3μmol/L时,硅藻逐渐取代甲藻,此次赤潮消散。     

五株鸽副粘病毒国内分离株F基因片段的克隆与分子特性

鸽Ⅰ型副粘病毒病(鸽瘟)是由鸽Ⅰ型副粘病毒(Pigeon paramyxivirus-Ⅰ,PPMV-Ⅰ)引起的一种高度接触性传染病,是危害养鸽业的主要疫病之一.     

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis

Small RNAs of 21-25 nucleotides (nt), including small interfering RNAs (siRNAs) and microRNAs (miRNAs), act as guide RNAs to silence target-gene expression in a sequence-specific manner. In addition to a Dicer homolog, DCL1, the biogenesis of miRNAs in Arabidopsis requires another protein, HEN1. miRNAs are reduced in abundance and increased in size in hen1 mutants. We found that HEN1 is a miRNA methyltransferase that adds a methyl group to the 3'-most nucleotide of miRNAs, but the role of miRNA methylation was unknown. Here, we show that siRNAs from sense transgenes, hairpin transgenes, and transposons or repeat sequences, as well as a new class of siRNAs known as trans-acting siRNAs, are also methylated in vivo by HEN1. In addition, we show that the size increase of small RNAs in the hen1-1 mutant is due to the addition of one to five U residues to the 3' ends of the small RNAs. Therefore, a novel uridylation activity targets the 3' ends of unmethylated miRNAs and siRNAs in hen1 mutants. We conclude that 3'-end methylation is a common step in miRNA and siRNA metabolism and likely protects the 3' ends of the small RNAs from the uridylation activity.     

中华按蚊CYP6Y亚家族基因的鉴定和生物信息学分析

【目的】鉴定中华按蚊Anopheles sinensis CYP6Y亚家族基因,分析它们的结构和特征,推测其可能的功能。【方法】以冈比亚按蚊An. gambiae CYP6Y1作为询问序列,通过双向Blast方法检索中华按蚊转录组中CYP6Y亚家族基因,并通过生物信息学方法分析基因结构、特征及可能的功能。【结果】从中华按蚊转录组测序数据中鉴定出2条CYP6Y亚家族基因,分别命名为AsCYP6Y1（GenBank登录号：KF709397）和AsCYP6Y2（GenBank登录号：KF709398）。序列分析显示,AsCYP6Y1和AsCYP6Y2全长分别为1 713 bp和1 815 bp,分别编码502和526个氨基酸。基因结构分析显示,该亚家族基因仅含有1个相位1型内含子并与其他P450基因形成保守的共线性分布。蛋白结构分析显示,这2个基因编码的蛋白含P450特有的5个特征序列和6个底物结合位点,且均不存在信号肽,其亚细胞定位为细胞质。3D结构分析显示,AsCYP6Y1有18条α螺旋和13股反向平行的β折叠,AsCYP6Y2有19条α螺旋和11股反向平行的β折叠。通过同样的方法,在达林按蚊An. darlingi中也鉴定出2个CYP6Y亚家族基因。系统进化分析显示,AsCYP6Y1和AsCYP6Y2分别与其他3种按蚊的CYP6Y1和CYP6Y2聚成一支,Bootstrap值均大于90%。替换率分析显示,中华按蚊AsCYP6Y1和AsCYP6Y2与其他3种按蚊同源基因的Ka/Ks均小于1。相对进化速率分析显示,中华按蚊CYP6Y和CYP6M亚家族的相对进化速率均显著快于CYP6P亚家族,而CYP6Y和CYP6M亚家族之间没有显著差异。【结论】在中华按蚊和达林按蚊中存在2个CYP6Y亚家族基因,之前在冈比亚按蚊和不吉按蚊An. funestus中也发现2个CYP6Y亚家族基因,表明CYP6Y亚家族基因可能在按蚊属广泛存在,且可能为按蚊属昆虫所特有。     

反义RNA介导的大肠杆菌非必需基因rpsF的基因沉默

【目的】探讨反义RNA技术介导的大肠杆菌非必需基因rpsF基因沉默导致菌体生长受抑制的原因。【方法】将rpsF基因5'端41-230 bp的片段反向插入带有末端配对结构的反义表达载体pHN678,获得重组质粒,导入大肠杆菌宿主获得反义RNA菌株Escherichia.coli/pHNF,并用诱导剂IPTG诱导反义RNA表达,通过与对照菌E.coli/pHN678的液体生长状态差异判断菌体生长表型;采用Real time RT-PCR方法跟踪分析转录水平。【结果】构建了针对rpsF的反义RNA菌株,且其生长受抑制程度与IPTG浓度呈正相关。IPTG浓度为100μmol/L时,菌体生长未受抑制,但靶基因rpsF的mRNA量降低了36%,而rpsR是位于同一操纵子下游的必需基因,其转录水平却未受影响;IPTG浓度为200μmol/L时,菌体生长明显受抑制,经分析发现rpsR转录水平降低了12%。【结论】反义RNA菌株E.coli/pHNF生长受抑制的原因是由于此反义RNA引起了同一操纵子下另一必需基因rpsR的转录水平降低。