Root dynamics of Carex stricta-dominated tussock meadows

Background and aims

The roots of tussock-forming plants contribute to the formation of microtopographic features in many ecosystems, but the dynamics of such roots are poorly understood. We examined the spatial heterogeneity of tussock fine root dynamics to investigate allocation patterns and the role of root productivity in the persistence of tussock structures.

Methods

We compared the spatial variability of fine root (<1 mm, 1–2 mm) density, biomass, % live, allocation, turnover rate (using bomb 14C), and productivity of four Carex stricta Lam.-dominated tussock meadows in the upper Midwest, USA (3 reference, 1 restored site).

Results

Relative to underlying microsites, tussocks were warm, dry, and high in root density, productivity, % live biomass, and turnover. Root productivity averaged 649 g?m^?2 yr^?1 (±208) in reference sites, comprised 57 % (±10) of total net production, and was concentrated in tussocks (70 %?±?4). Root turnover rate averaged 0.63 yr^?1 (±0.08), but tussocks had ~50 % faster root turnover than the underlying soil, and <1 mm roots turned over ~40 % faster than 1–2 mm roots.

Conclusions

Our detailed analysis of the spatial heterogeneity of tussock root dynamics suggests that high allocation and elevated turnover of tussock roots facilitates organic matter accumulation and tussock persistence over time.     

An Engulfment Assay: A Protocol to Assess Interactions Between CNS Phagocytes and Neurons

Phagocytosis is a process in which a cell engulfs material (entire cell, parts of a cell, debris, etc.) in its surrounding extracellular environment and subsequently digests this material, commonly through lysosomal degradation. Microglia are the resident immune cells of the central nervous system (CNS) whose phagocytic function has been described in a broad range of conditions from neurodegenerative disease (e.g., beta-amyloid clearance in Alzheimer’s disease) to development of the healthy brain (e.g., synaptic pruning)^1-6. The following protocol is an engulfment assay developed to visualize and quantify microglia-mediated engulfment of presynaptic inputs in the developing mouse retinogeniculate system⁷. While this assay was used to assess microglia function in this particular context, a similar approach may be used to assess other phagocytes throughout the brain (e.g., astrocytes) and the rest of the body (e.g., peripheral macrophages) as well as other contexts in which synaptic remodeling occurs (e.g. ,brain injury/disease).     

Anaerobic digestion of harvested aquatic weeds: water hyacinth (Eichhornia crassipes), cabomba (Cabomba Caroliniana) and salvinia (Salvinia molesta)

The aim of this study was to explore the potential of three aquatic weeds, water hyacinth, cabomba, and salvinia, as substrates for anaerobic digestion. A set of four pilot-scale, batch digestions were undertaken to assess the yield and quality (% methane) of biogas from each plant species, and the rate of degradation. A set of 56 small-scale (100 mL) biological methane potential (BMP) tests were designed to test the repeatability of the digestions, and the impact of drying and nutrient addition.The results of the pilot-scale digestions show that both water hyacinth and cabomba are readily degradable, yielding 267 L biogas kg^?1 VS and 221 L biogas kg^?1 VS, respectively, with methane content of approximately 50%. There is evidence that the cabomba fed reactor leaked midway through the digestion therefore the biogas yield is potentially higher than measured in this case. Salvinia proved to be less readily degradable with a yield of 155 L biogas kg^?1 VS at a quality of 50% methane.The BMPs showed that the variability was low for water hyacinth and cabomba but high for salvinia. They also showed that the addition of nutrient solution and manure did not significantly increase the biogas yields and that drying was detrimental to the anaerobic degradability of all three substrates.Based on these results treatment of both water hyacinth and cabomba by anaerobic digestion can be recommended. Anaerobic digestion of Salvinia cannot be recommended due to the low biogas yields and high variability for this substrate.     

Long-term effects of dexamethasone and nerve growth factor on adrenal medullary cells cultured from young adult rats

Summary Normal postnatal rat chromaffin cells and rat pheochromocytoma cells are known to show extensive Nerve Growth Factor (NGF)-induced process outgrowth in culture, and this outgrowth from the postnatal chromaffin cells is abolished by the corticosteroid dexamethasone. To determine whether adult rat chromaffin cells respond to NGF and dexamethasone, dissociated adrenal medullary cells from 3-month-old rats were cultured for 30 days in the presence or absence of these agents. Such cultures contained typical chromaffin cells, chromaffin cells with processes, and neurons. Fewer than 2 % of normal adult chromaffin cells formed processes under any of the conditions studied, and statistically significant changes in this proportion were not detectable in the presence of NGF or dexamethasone. Adrenal medullary neurons, however, were observed only in the presence of NGF, in cultures with or without dexamethasone, and thus appear to be previously unreported NGF targets which require NGF for survival or process outgrowth. Dexamethasone markedly increased total catecholamine content, total content of epinephrine, and tyrosine hydroxylase activity in cultures with or without NGF. In contrast, postnatal rat chromaffin and rat pheochromocytoma cells which have been studied in culture do not produce epinephrine under any of these conditions. It is concluded that rat adrenal chromaffin cells undergo age-related changes in both structural and functional plasticity. The in vitro characteristics of rat pheochromocytoma cells more closely resemble those of postnatal than of adult rat chromaffin cells, but may not entirely reflect the properties of the majority of chromaffin cells in either age group.     

A new species of the cheilostome bryozoan Chiastosella in the Southern Ocean,past and present

Understanding whether marine calcifying organisms may acclimatise to climate change is important with regard to their survival over the coming century. Due to cold waters having a naturally higher CO₂ uptake, the Southern Ocean provides an especially good opportunity to study the potential impact of climate change. In 2011, a new cheilostome bryozoan species—Chiastosella ettorina sp. nov.—was dredged from Burdwood Bank, Southern Ocean, at 324–219-m depth during the Nathaniel B Palmer Cruise. This species had previously been collected in 1902 from the same area at 100-m depth, but was incorrectly identified as Chiastosella watersi, an encrusting species from New Zealand. The availability of samples of the same species, from the same general location, but collected 109 years apart allowed us to investigate morphological modifications potentially arising from environmental changes. We found a significant difference in zooid size, with the oldest and shallowest specimens having smaller zooids than the recently collected deeper specimens. This difference in zooid size appears to be unrelated to known sources of environmental variation such as temperature and salinity, and it could represent the extremes of the zooid size range of C. ettorina. An alternative explanation is that acidifying waters may have caused zooids to grow more slowly, resulting in a final larger size.     

Primary vaccination with low dose live dengue 1 virus generates a proinflammatory, multifunctional T cell response in humans

The four dengue virus serotypes (DENV-1-DENV-4) have a large impact on global health, causing 50-100 million cases of dengue fever annually. Herein, we describe the first kinetic T cell response to a low-dose DENV-1 vaccination study (10 PFU) in humans. Using flow cytometry, we found that proinflammatory cytokines, IFNγ, TNFα, and IL-2, were generated by DENV-1-specific CD4(+) cells 21 days post-DENV-1 exposure, and their production continued through the latest time-point, day 42 (p<0.0001 for all cytokines). No statistically significant changes were observed at any time-points for IL-10 (p = 0.19), a regulatory cytokine, indicating that the response to DENV-1 was primarily proinflammatory in nature. We also observed little T cell cross-reactivity to the other 3 DENV serotypes. The percentage of multifunctional T cells (T cells making ≥ 2 cytokines simultaneously) increased with time post-DENV-1 exposure (p<0.0001). The presence of multifunctional T cells together with neutralizing antibody data suggest that the immune response generated to the vaccine may be protective. This work provides an initial framework for defining primary T cell responses to each DENV serotype and will enhance the evaluation of a tetravalent DENV vaccine.     

Cadherin-9 regulates synapse-specific differentiation in the developing hippocampus

Our understanding of mechanisms that regulate the differentiation of specific classes of synapses is limited. Here, we investigate the formation of synapses between hippocampal dentate gyrus (DG) neurons and their target CA3 neurons and find that DG neurons preferentially form synapses with CA3 rather than DG or CA1 neurons in culture, suggesting that specific interactions between DG and CA3 neurons drive synapse formation. Cadherin-9 is expressed selectively in DG and CA3 neurons, and downregulation of cadherin-9 in CA3 neurons leads to a selective decrease in the number and size of DG synapses onto CA3 neurons. In addition, loss of cadherin-9 from DG or CA3 neurons in vivo leads to striking defects in the formation and differentiation of the DG-CA3 mossy fiber synapse. These observations indicate that cadherin-9 bidirectionally regulates DG-CA3 synapse development and highlight the critical role of differentially expressed molecular cues in establishing specific connections in the mammalian brain.     

Domains in tropoelastin that mediate elastin deposition in vitro and in vivo

Elastic fiber assembly is a complicated process involving multiple different proteins and enzyme activities. However, the specific protein-protein interactions that facilitate elastin polymerization have not been defined. To identify domains in the tropoelastin molecule important for the assembly process, we utilized an in vitro assembly model to map sequences within tropoelastin that facilitate its association with fibrillin-containing microfibrils in the extracellular matrix. Our results show that an essential assembly domain is located in the C-terminal region of the molecule, encoded by exons 29-36. Fine mapping studies using an exon deletion strategy and synthetic peptides identified the hydrophobic sequence in exon 30 as a major functional element in this region and suggested that the assembly process is driven by the propensity of this sequence to form beta-sheet structure. Tropoelastin molecules lacking the C-terminal assembly domain expressed as transgenes in mice did not assemble nor did they interfere with assembly of full-length normal mouse elastin. In addition to providing important information about elastin assembly in general, the results of this study suggest how removal or alteration of the C terminus through stop or frameshift mutations might contribute to the elastin-related diseases supravalvular aortic stenosis and cutis laxa.     

Protein-marking-based assessment of infield predator dispersal

Understanding infield predator dispersal is crucial for designing predator conservation programmes. A study aimed at evaluating methods of collecting insects in protein-marking studies and monitoring predator movement was conducted. Results indicate that collection by sweep net does not result in false positives and predator groups displayed distinct dispersal patterns.