Semi-rational engineering of CYP153A35 to enhance ω-hydroxylation activity toward palmitic acid

Applied Microbiology and Biotechnology - CYP153A35 from Gordonia alkanivorans was recently characterized as fatty acid ω-hydroxylase. To enhance the catalytic activity of CYP153A35 toward...     

Adapting Strategy of Biennial Endangered <Emphasis Type="Italic">Halenia corniculata</Emphasis> (L.) Cornaz to Environmental Stress and Its Implications for Conservation Plan

Under intensive environmental stress, reported that plants have complementary and positive interactions instead of competition among species. In order to examine whether there as a possible correlation between the performance of Halenia corniculata and the coverage/height of other plants with the same distribution, a total of 30 plots were established at two representative distributional areas. The height, total number of chasmogamous flowers and cleistogamous flowers, their overall plots coverage, and observed plants species on each plot were determined. Our results revealed that the number of chasmogamous and cleistogamous flowers of Halenia corniculata was increased when its height was increased. The performance of Halenia corniculata was found to have a significant correlation with the overall coverage of observed plants species in the plot as well as the height of observed plants in established plots. Our results suggest that the biennial plant Halenia corniculata might be able to choose a site inhabited by other perennial plants in the high-altitude region under environmental stress for appropriate growth and reproduction. One main reason that Halenia corniculata seedlings could be established in regions where other plants are inhabited might be due to the degree of light requirement by the seedling stage is different from that at the adult stage. The size of Halenia corniculata population in South Korea was found to be proportional to that of available sites that could support its life cycle, suggesting that available sites need to be secure in order to maintain its life cycle.     

Cloning of an aminoalcoholphosphotransferase cDNA from chinese cabbage roots

Aminoalcoholphosphotransferase is the enzyme that catalyzes the synthesis of phosphatidylcholine and phosphatidylethanolamine from diacylglycerol using CDP-aminoalcohol such as CDP-choline and CDP-ethanolamine. To determine its cDNA structure from roots of Chinese cabbage,Brassica campestris L. ssp.pekinensis, degenerate primers were designed from the regions showing high amino acid homology between yeastCPT1 and soybeanAAPT1 and used for PCR amplification of Chinese cabbage DNA. Chinese cabbage aminoalcoholphosphotransferase cDNA (AAPT) contains an open reading frame of 1,167 bp coding for a protein of 389 amino acids. It shared 81% identity and 94% similarity with soybeanAAPT1 at the predicted amino acid level. Hydropathy profile analysis suggested that the predicted protein structure of Chinese cabbage aminoalcoholphosphotransferase was very similar to the soybean enzyme, showing an overall hydrophobicity and having the same number of predicted transmembrane domains. Southern analysis indicated that there might be close isoforms of the enzyme.AAPT was expressed equally well in young shoots and roots.     

Crystal structure of a putative pyridoxine 5′‐phosphate oxidase (Rv2607) from Mycobacterium tuberculosis

The three‐dimensional structure of Rv2607, a putative pyridoxine 5′‐phosphate oxidase (PNPOx) from Mycobacterium tuberculosis, has been determined by X‐ray crystallography to 2.5 Å resolution. Rv2607 has a core domain similar to known PNPOx structures with a flavin mononucleotide (FMN) cofactor. Electron density for two FMN at the dimer interface is weak despite the bright yellow color of the protein solution and crystal. The shape and size of the putative binding pocket is markedly different from that of members of the PNPOx family, which may indicate some significant changes in the FMN binding mode of this protein relative to members of the family. Proteins 2006. © 2005 Wiley‐Liss, Inc.     

Microorganisms as efficient biosystem for the synthesis of metal nanoparticles: current scenario and future possibilities

Nanoparticles, the elementary structures of nanotechnology, are important materials for fundamental studies and variety of applications. The different sizes and shapes of these materials exhibit unique physical and chemical properties than their bulk materials. There is a great interest in obtaining well-dispersed, ultrafine, and uniform nanoparticles to delineate and utilize their distinct properties. Nanoparticle synthesis can be achieved through a wide range of materials utilizing a number of methods including physical, chemical, and biological processes with various precursors from liquids and solids. There is a growing need to prepare environmentally friendly nanoparticles that do not produce toxic wastes in their process synthesis protocol. This kind of synthesis can be achieved by green environment benign processes, which happen to be mostly of a biological nature. Microorganisms are one of the most attractive and simple sources for the synthesis of different types of nanoparticles. This review is an attempt to provide the up-to-date information on current status of nanoparticle synthesis by different types of microorganisms such as fungi, yeast, bacteria, cyanobacteria, actinomycete, and algae. The probable biosynthesis mechanism and conditions for size/shape control are described. Various applications of microbially synthesized nanoparticles are summarized. They include antibacterial, antifungal, anticancer, larvicidal, medical imaging, biosensor, and catalytic applications. Finally, limitations and future prospects for specific research are discussed.     

Relationship between root vigour,photosynthesis and biomass in soybean cultivars during 87 years of genetic improvement in the northern China

During the last century, the world soybean yield has been constantly enhancing at a remarkable rate. Factors limiting the soybean yield may be multiple. It is widely acknowledged that changes of root metabolism can influence aboveground characteristics, such as the seed yield and photosynthesis. In this study, we considered root bleeding sap mass (BSM) and root activity (RA) as indicators of the root growth vigour. We used 27 soybean cultivars, spanning from 1923 to 2009, to evaluate the contribution of root characteristic improvement to efficient photosynthesis and dry matter production. The BSM, RA, net photosynthetic rate (P_N), and organ biomass were measured at different growth stages, such as the fourth leaf node, flowering, podding, and seed-filling stage. Our results showed that the soybean cultivars increased their biomass and P_N thanks to genetic improvement. At the same time, BSM and RA also increased in dependence on a year of cultivar release. However, both P_N and biomass were positively correlated with root characteristics only at the podding stage. Our data revealed that the improved root characteristic may have contributed to the enhanced photosynthesis, biomass, and yield of soybean cultivars during last 87 years of genetic improvement. We suggest that BSM and RA could be used as important indexes for further practice in soybean production improvement.