A single exposure to immobilization causes long-lasting pituitary-adrenal and behavioral sensitization to mild stressors

We have previously reported that a single exposure to immobilization (IMO) in rats causes a long-term desensitization of the hypothalamic-pituitary-adrenal (HPA) response to the same (homotypic) stressor. Since there are reports showing that a single exposure to other stressors causes sensitization of the HPA response to heterotypic stressors and increases anxiety-like behavior, we studied in the present work the long-term effects of IMO on behavioral and HPA response to mild superimposed stressors. In Experiments 1 and 2, adult male Sprague–Dawley rats were subjected to 2 h of IMO and then exposed for 5 min to the elevated plus-maze (EPM) at 1, 3 or 7 days after IMO. Blood samples were taken at 15 min after initial exposure to the EPM. Increases in anxiety-like behavior and HPA responsiveness to the EPM were found at all times post-IMO. Changes in the resting levels of HPA hormones did not explain the enhanced HPA responsiveness to the EPM (Experiment 3). In Experiments 4 and 5, we studied the effects of a single exposure to a shorter session of IMO (1 h) on behavioral and HPA responses to a brief and mild session of foot-shocks done 10 days after IMO. Neither previous IMO nor exposure to shocks in control rats modified behavior in the EPM. However, a brief session of shocks in previously IMO-exposed rats dramatically increased anxiety in the EPM. HPA and freezing responses to shocks were similar in control and previous IMO groups. Therefore, a single exposure to IMO appears to induce long-lasting HPA and behavioral sensitization to mild superimposed stressors, although the two responses are likely to be at least partially independent. Long-term effects of IMO on the susceptibility to stress-induced endocrine and emotional disturbances may be relevant to the characterization of animal models of post-traumatic stress.     

Biological control-based IPM in sweet pepper greenhouses using Amblyseius swirskii (Acari: Phytoseiidae)

The predatory mite Amblyseius swirskii Athias-Henriot (Acari: Phytoseiidae) has been evaluated as a potential biological control agent for whitefly and thrips, but it has yet to be demonstrated that the addition of A. swirskii to an existing biological control programme improves management of these pests in commercial greenhouses. Experiments were initiated at the beginning of the cropping season in greenhouses located in the two main sweet pepper growing areas of Spain. At each location, a randomised complete block design was used with four replicates and two treatments: (1) current biological control-based Integrated Pest Management standard or (2) this standard supplemented by introductions of A. swirskii. A. swirskii established and reproduced well in the crop and was the most abundant phytoseiid species during the experiment in the plots where it was released. It also provided significant reduction of the whitefly population and pest control costs compared to greenhouses employing the standard. However, the addition of A. swirskii did not reduce thrips populations with respect to plots not receiving the predatory mite, presumably due to the inclusion of the anthocorid bug Orius laevigatus Fieber (Heteroptera: Anthocoridae) which established well. These results make the inclusion of A. swirskii in IPM programmes for sweet pepper crops advisable for whitefly control.     

Low but contrasting neutral genetic differentiation shaped by winter temperature in European great tits

Gene flow is usually thought to reduce genetic divergence and impede local adaptation by homogenising gene pools between populations. However, evidence for local adaptation and phenotypic differentiation in highly mobile species, experiencing high levels of gene flow, is emerging. Assessing population genetic structure at different spatial scales is thus a crucial step towards understanding mechanisms underlying intraspecific differentiation and diversification. Here, we studied the population genetic structure of a highly mobile species – the great tit Parus major – at different spatial scales. We analysed 884 individuals from 30 sites across Europe including 10 close‐by sites (< 50 km), using 22 microsatellite markers. Overall we found a low but significant genetic differentiation among sites (F_ST = 0.008). Genetic differentiation was higher, and genetic diversity lower, in south‐western Europe. These regional differences were statistically best explained by winter temperature. Overall, our results suggest that great tits form a single patchy metapopulation across Europe, in which genetic differentiation is independent of geographical distance and gene flow may be regulated by environmental factors via movements related to winter severity. This might have important implications for the evolutionary trajectories of sub‐populations, especially in the context of climate change, and calls for future investigations of local differences in costs and benefits of philopatry at large scales.     

Differences in time and space use between two sympatric Acrocephalus warblers with similar diets

Capsule: We found high diet overlap and different uses of space and time between Moustached Warblers Acrocephalus melanopogon and Reed Warblers Acrocephalus scirpaceus breeding in sympatry at a marshland in Spain.

Aims: To study the degree of diet overlap between both species, their space use on a local scale and their breeding phenologies.

Methods: We studied the breeding phenologies of the two species by standardized ringing activity. Spatial distribution was investigated by point counts. We determined diet composition from emetic samples and we collected invertebrates by standardized sweep-netting to estimate food availability.

Results: Diet and prey selection were similar among species. Conversely, spatial overlap was relatively small (<50%) and breeding phenologies were not synchronized. Both food availability and the overall abundance of the two species increased throughout the breeding season.

Conclusion: The two species are potential competitors for food and the observed differences in spatial and temporal niches may represent a way to lower competition for trophic resources: Moustached Warblers could reduce competition by breeding early, while Reed Warblers could avoid settling in areas occupied by the other species.     

Structural changes in mitochondrial F1-ATPase induced by the removal of loosely bound nucleotides

Mitochondrial F1-ATPase from beef heart, forms aggregates when it is depleted of loosely bound nucleotides by repeated precipitation in ammonium sulfate. Polyacrylamide gradient gel electrophoresis, in non dissociating conditions shows that the aggregate formed is a dimer (708,000 daltons). The aggregation is attributed to a conformational change of the protein as a consequence of the elimination of the nucleotides from the low affinity binding sites. This structural alteration seems to be reversible because, after addition of ATP, the aggregation is not observed on polyacrylamide gels but the catalytic properties remain unchanged. This conformational change alters the accessibility of protein sulfhydryl groups to 5,5' - dithiobis(2-nitrobenzoic acid). All these observations emphasize the importance of protein nucleotide interactions to the conformation of the mitochondrial F1-ATPase.     

Whole-genome sequence of Stenotrophomonas maltophilia D457, a clinical isolate and a model strain

Stenotrophomonas maltophilia is an opportunistic pathogen with an environmental origin, and it is an increasingly relevant cause of nosocomial infections. Here we present the whole-genome sequence of S. maltophilia strain D457, a clinical isolate that is being used as a model for studying antibiotic resistance in this bacterial species.     

Differential annotation of tRNA genes with anticodon CAT in bacterial genomes

We have developed three strategies to discriminate among the three types of tRNA genes with anticodon CAT (tRNA(Ile), elongator tRNA(Met) and initiator tRNA(fMet)) in bacterial genomes. With these strategies, we have classified the tRNA genes from 234 bacterial and several organellar genomes. These sequences, in an aligned or unaligned format, may be used for the identification and annotation of tRNA (CAT) genes in other genomes. The first strategy is based on the position of the problem sequences in a phenogram (a tree-like network), the second on the minimum average number of differences against the tRNA sequences of the three types and the third on the search for the highest score value against the profiles of the three types of tRNA genes. The species with the maximum number of tRNA(fMet) and tRNA(Met) was Photobacterium profundum, whereas the genome of one Escherichia coli strain presented the maximum number of tRNA(Ile) (CAT) genes. This last tRNA gene and tilS, encoding an RNA-modifying enzyme, are not essential in bacteria. The acquisition of a tRNA(Ile) (TAT) gene by Mycoplasma mobile has led to the loss of both the tRNA(Ile) (CAT) and the tilS genes. The new tRNA has appropriated the function of decoding AUA codons.     

‘Alperujo’ compost amendment of contaminated calcareous and acidic soils: Effects on growth and trace element uptake by five Brassica species

The effects of ‘alperujo’ compost on trace element availability and on microbial activity of two contaminated soils, a calcareous soil (S1) with high contents of Pb and Zn, and an acidic soil (S2) with a substantial amount of Al, As, Pb and Zn, were assessed. Additionally, the growth and capacity for contaminant phytoextraction of five Brassica species were studied. Compost amendment did not affect S1, but in S2 it increased soil pH, thus reducing Al and Zn bioavailability and toxicity. Compost application also increased microbial population and bioactivity in both soils. Brassica plants did not survive in S2, yet they thrived in S1. When compost was applied to S2, Brassica carinata, Brassica napus and Brassica oleracea grew adequately. Considering both the capacity to accumulate trace elements in the shoot and the ability to grow in the contaminated soils tested, the most efficient phytoextractors were Brassica juncea in S1 (particularly for Zn) and Brassica oleracea in S2 (for Al, As, Pb and Zn).     

Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria

Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling several characteristics, the main ones being that an ortholog was present in every genome and that none of them had been acquired by horizontal gene transfer. Genome rearrangement distances were estimated based on either the number of breakpoints or the minimal number of inversions separating two genomes. Breakpoint and inversion distances were highly correlated, indicating that inversions were the main type of rearrangement event in gamma-Proteobacteria. In general, the progressive increase in sequence-based distances between genome pairs was associated with the increase in their rearrangement-based distances but with several groups of distances not following this pattern. Compared with free-living enteric bacteria, the lineages of Pasteurellaceae were evolving, on average, to relatively higher rates of between 2.02 and 1.64, while the endosymbiotic bacterial lineages of Buchnera aphidicola and Wigglesworthia glossinidia were evolving at moderately higher rates of 1.38 and 1.35, respectively. Because we know that the rearrangement rate in the Bu. aphidicola lineage was close to zero during the last 100-150 Myr of evolution, we deduced that a much higher rate took place in the first period of lineage evolution after the divergence of the Escherichia coli lineage. On the other hand, the lineage of the endosymbiont Blochmannia floridanus did present an almost identical rate to free-living enteric bacteria, indicating that the increase in the genome rearrangement rate is not a general change associated with bacterial endosymbiosis. Phylogenetic reconstruction based on rearrangement distances showed a different topology from the one inferred by sequence information. This topology broke the proposed monophyly of the three endosymbiotic lineages and placed Bl. floridanus as a closer relative to E. coli than Yersinia pestis. These results indicate that the phylogeny of these insect endosymbionts is still an open question that will require the development of specific phylogenetic methods to confirm whether the sisterhood of the three endosymbiotic lineages is real or a consequence of a long-branch attraction phenomenon.