Variation and taxonomy of Aesculus pavia L. (Hippocastanaceae) in Texas

The status of Aesculus pavia var. flavescens, a set of yellow-flowered populations endemic to the Edwards Plateau of central Texas, was evaluated on the basis of comparative morphology, geography, flowering phenology, and pollination ecology. Plants of typical A. pavia have red, tubular flowers with exserted stamens and are effectively pollinated by ruby-throated hummingbirds. Plants of var. flavescens have yellow, campanulate flowers with included stamens that can be pollinated effectively by large bees. These ethological reproductive isolating mechanisms are further augmented by a difference in flowering time between the two sets of populations and by geographical restriction of the yellow-flowered plants to localities on the Edwards Plateau. The yellow and red-flowered plants constitute two morphologically distinct groups, despite evidence of limited introgression in counties along the Balcones Escarpment. A yellow-flowered plant discovered in coastal east Texas may indicate the mechanism by which var. flavescens originated, but this plant is much more closely comparable to typical red-flowered var. pavia than to the yellow-flowered plants on the Edwards Plateau. An evolutionary history of section Pavia of Aesculus is presented, and it is concluded that the yellow-flowered plants of central Texas are best regarded as a taxonomic variety.     

The galactan sulfate from the edible,red alga Porphyra columbina

A galactan sulfate has been isolated from the seaweed Porphyra columbina, and its structure established by a combination of methylation, methanolysis, treatment with alkali followed by methylation, and ¹³C-n.m.r. spectroscopy. The polysaccharide belongs to the porphyran class, and consists of 3-linked β-d-galactosyl residues and 4-linked α-l-galactosyl residues. 3,6-Anhydro-l-galactose and l-galactose 6-sulfate residues total approximately half of the sugar units, the other half being made up of d-galactose and 6-O-methyl-d-galactose residues. Some evidence is presented that suggests that the galactan sulfate does not have a completely alternating structure.     

Cell proliferation kinetics of epidermis and sebaceous glands in relation to chalone action.

Median S-phase lengths of pinna epidermis and sebaceous glands, and of epithelia from the oesophagus and under surface of the tongue of Albino Swiss S mice were estimated by the percentage labelled mitoses method (PLM). The 18.4 and 18,8 hr for the median length of S-phase for pinna epidermis and sebaceous glands respectively made it possible for these two tissues to be used experimentally for testing tissue specificity in chalone assay experiments. The 10.0 and 11.5 hr for oesophagus ang tongue epithelium respectively made experimental design for chalone assay difficult when pinna epidermis was the target tissue. The results of the Labelling Index measured each hour throughout a 24-hr period showed no distinct single peaked diurnal rhythm for pinna epidermis and sebaceous glands. Instead a circadian rhythm with several small peaks occurred which would be expected if an S-phase of approximately 18 hr was imposed on the diurnal rhythm. This indicates that there may be very little change in the rate of DNA synthesis. The results are given for the assay in vivo of purified epidermal G1 and G2 chalones, and the 72--81% ethanol precipitate of pig skin from which they could be isolated. These experiments were performed over a time period which took into account the diurnal rhythm of activity of the mice as well as the S-phase lengths. Extrapolating the results with time of action of the chalone shows that the G1 chalone acts at the point of entry into DNA synthesis and that the S-phase length was approximately 17 hr for both the pinna epidermis and sebaceous glands. This may be a more correct value since the PLM method overestimates the median S-phase length as it is known that in pinna skin the [3H]TdR is available to the tissues for 2 hr and true flash labelling does not take place. The previous reports that epidermal G1 chalone acts some hours prior to entry into S-phase resulted from experiments on back skin where the S-phase is shorter and there is a pronounced diurnal rhythm which could mask the chalone effect. The epidermal G2 chalone had no effect on DNA synthesis even at different times in the circadian rhythm. Thus the circadian rhythms and S-phase lengths of the test tissues need to be considered when experiments are performed with chalones. Ideally, the target tissues selected for cell line specificity tests should have the same cell kinetics for the easier and more accurate assessment and interpretation of results. When the tissues have markedly different cell kinetics, experimental procedures and results need to be evaluated accordingly. The point of action of G1 chalone can only be assessed if the effect is measured over the peak of incorporation of [3H]TdR into DNA. The results of the effects of skin extracts are analysed in relation to changes in the availability of [3H]TdR for the incorporation into DNA and to the possibility of there being two distinct populations of proliferating cells.     

New Panamanian species of gesneriaceae

Eight new species are described from Panama, Besleria calycina, B. rara, Cremosperma maculatum, Drymonia folsomii, Moussonia ampla, Oerstedina suffrutescens, Paradrymonia ommata, and P. pedunculata. One of the new species is illustrated.     

Silicon,a required nutrient for Cladophora glomerata (L) Kütz. (Chlorophyta)

Summary Physiological and ultrastructural studies of unialgal cultures demonstrated that silicon is a required nutrient and a component of the cell walls of Cladophora glomerata. Addition of silicon promoted growth of the alga, and the addition of germanium, an analogue of silicon, inhibited growth of C. glomerata in culture. An electron-dense outer layer was a conspicuous part of the cell walls of filaments taken from silicon rich medium.Abbreviation SWE soil water extract     

AN ULTRASTRUCTURAL STUDY OF SPERMATIUM FORMATION IN THE RUST FUNGUS GYMNOSPORANGIUM JUNIPERI-VIRGINIANAE

Spermatium formation in G. juniperi-virginianae is phialidic. The spermatia are blown out of the tips of spermatiophores which possess a thickened neck region and a distinct, flared collarette. Each spermatium initial is surrounded by a thin wall which is attached to the inner surface of the spermatiophore wall just below the thickened neck region. A spermatium is delimited by a centripetally developing septum and then pushed into the spermogonial cavity by the next spermatium initial. Mature spermatia are ellipsoid with tapered ends and are surrounded by a thin wall. Each contains a single nucleus, many ribosomes, a few small vacuoles, and a number of lipid bodies and mitochondria.     

The nascent polypeptide-associated complex (NAC) controls translation initiation in cis by recruiting nucleolin to the encoding mRNA

Protein aggregates and abnormal proteins are toxic and associated with neurodegenerative diseases. There are several mechanisms to help cells get rid of aggregates but little is known on how cells prevent aggregate-prone proteins from being synthesised. The EBNA1 of the Epstein-Barr virus (EBV) evades the immune system by suppressing its own mRNA translation initiation in order to minimize the production of antigenic peptides for the major histocompatibility (MHC) class I pathway. Here we show that the emerging peptide of the disordered glycine–alanine repeat (GAr) within EBNA1 dislodges the nascent polypeptide-associated complex (NAC) from the ribosome. This results in the recruitment of nucleolin to the GAr-encoding mRNA and suppression of mRNA translation initiation in cis. Suppressing NAC alpha (NACA) expression prevents nucleolin from binding to the GAr mRNA and overcomes GAr-mediated translation inhibition. Taken together, these observations suggest that EBNA1 exploits a nascent protein quality control pathway to regulate its own rate of synthesis that is based on sensing the nascent GAr peptide by NAC followed by the recruitment of nucleolin to the GAr-encoding RNA sequence.     

Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests

Understanding the relationship between genetic variations and variations in complex and quantitative phenotypes remains an ongoing challenge. While Genome-wide association studies (GWAS) have become a vital tool for identifying single-locus associations, we lack methods for identifying epistatic interactions. In this article, we propose a novel method for higher-order epistasis detection using mixed effect conditional inference forest (epiMEIF). The proposed method is fitted on a group of single nucleotide polymorphisms (SNPs) potentially associated with the phenotype and the tree structure in the forest facilitates the identification of n-way interactions between the SNPs. Additional testing strategies further improve the robustness of the method. We demonstrate its ability to detect true n-way interactions via extensive simulations in both cross-sectional and longitudinal synthetic datasets. This is further illustrated in an application to reveal epistatic interactions from natural variations of cardiac traits in flies (Drosophila). Overall, the method provides a generalized way to identify higher-order interactions from any GWAS data, thereby greatly improving the detection of the genetic architecture underlying complex phenotypes.     

Old world blowflies in the new world

Human activity, particularly migration and the export of live animals, can provide vehicles for the dispersal of many parasites and their vectors. These movements, often overlooked until too late, provide potential for epidemic outbreaks and can profoundly alter accepted ideas on the geographic distribution and epidemiological status of particular species. In this review, Brian Laurence discusses the recent rapid spread of blowflies into the americas; these conspicious green flies transport a variety of gastro-intestinal pathogens between their favoured environments of latrines and exposed food, and some species are important parasites of flesh wounds, causing cutaneous myiasis.     

Premortem autophagy determines the immunogenicity of chemotherapy-induced cancer cell death

One particular strategy to render anticancer therapies efficient consists of converting the patient's own tumor cells into therapeutic vaccines, via the induction of immunogenic cell death (ICD). One of the hallmarks of ICD dwells in the active release of ATP by cells committed to undergo, but not yet having succumbed to, apoptosis. We observed that the knockdown of essential autophagy-related genes (ATG3, ATG5, ATG7 and BECN1) abolishes the pre-apoptotic secretion of ATP by several human and murine cancer cell lines undergoing ICD. Accordingly, autophagy-competent, but not autophagy-deficient, tumor cells treated with ICD inducers in vitro could induce a tumor-specific immune response in vivo. Cancer cell lines stably depleted of ATG5 or ATG7 normally generate tumors in vivo, and such autophagy-deficient neoplasms, upon systemic treatment with ICD inducers, exhibit the same levels of apoptosis (as monitored by nuclear shrinkage and caspase-3 activation) and necrosis (as determined by following the kinetics of HMGB1 release) as their autophagy-proficient counterparts. However, autophagy-incompetent cancers fail to release ATP, to recruit immune effectors into the tumor bed and to respond to chemotherapy in conditions in which autophagy-competent tumors do so. The intratumoral administration of ecto-ATPase inhibitors increases extracellular ATP concentrations, re-establishes the therapy-induced recruitment of dendritic cells and T cells into the tumor bed, and restores the chemotherapeutic response of autophagy-deficient cancers. Altogether, these results suggest that autophagy-incompetent tumor cells escape from chemotherapy-induced (and perhaps natural?) immunosurveillance because they are unable to release ATP.