Amino acid sequence of a cystatin from venom of the African puff adder (Bitis arietans).

The amino acid sequence of a cystatin from the venom of the African puff adder (Bitis arietans) is reported. It shows the protein to be more closely related to the Type 2 cystatins than the others, and yet it is only 31-37% identical to the known Type 2 cystatins, and differs strikingly in the insertion of a six-residue segment.     

A cystatin-like cysteine proteinase inhibitor from venom of the African puff adder (Bitis arietans).

Venoms from eight snakes have been screened for inhibitory activity against papain, strong activity being found in that of the African puff adder, Bitis arietans. The inhibitor from B. arietans venom has been purified by affinity chromatography on carboxymethyl-papain-Sepharose and ion-exchange chromatography. The inhibitor had an apparent Mr of 13,000 in SDS/polyacrylamide gel electrophoresis, and pI value of 6.5 (major component) or 6.3 (minor component). Values of Ki for the inhibition of papain, cathepsin B and dipeptidyl peptidase I were 0.10, 2.7 and 0.23 nM, respectively; chicken calpain was not inhibited.     

Tempo and mode of concerted evolution in the L1 repeat family of mice

A 300-bp DNA sequence has been determined for 30 (10 from each of three species of mice) random isolates of a subset of the long interspersed repeat family L1. From these data we conclude that members of the L1 family are evolving in concert at the DNA sequence level in Mus domesticus, Mus caroli, and Mus platythrix. The mechanism responsible for this phenomenon may be either duplicative transposition, gene conversion, or a combination of the two. The amount of intraspecies divergence averages 4.4%, although between species base substitutions accumulate at the rate of approximately 0.85%/Myr to a maximum divergence of 9.1% between M. platythrix and both M. domesticus and M. caroli. Parsimony analysis reveals that the M. platythrix L1 family has evolved into a distinct clade in the 10-12 Myr since M. platythrix last shared a common ancestor with M. domesticus and M. caroli. The parsimony tree also provides a means to derive the average half-life of L1 sequences in the genome. The rates of gain and loss of individual copies of L1 were estimated to be approximately equal, such that approximately one-half of them turn over every 3.3 Myr.      

Laser Raman light-scattering observations of conformational changes in myosin induced by inorganic salts

The Raman spectra of aqueous solutions of myosin and mixtures of myosin in solutions of the salts CaCl₂, MgCl₂, and LiBr have been taken. The spectrum of the solvent background has been subtracted by means of a computer, leaving only the Raman peaks of the protein. From an analysis of the Raman bands in the regions at 900, 940, 1,240-1,300, and 1,650-1,670 cm^-1, it seems likely that CaCl₂ effects an α-to β-transition in myosin, probably owing to the interaction of the Ca²⁺ ion, LiBr appears to denature the protein leading to increased random coil structure, and MgCl₂ appears to have an effect intermediate between the two other salts. These results are reported for concentrations as low as 10^-5 M of CaCl₂ and MgCl₂.

This investigation indicates the usefulness of the Raman light-scattering technique for the study of protein conformational changes.

     

Spontaneous tetraploidy in apomictic seedlings ofCitrus

Populations of apomictic seedlings of clones ofCitrus species,Citrus hybrids, andPoncirus in the sub-family Aurantioideae were examined for spontaneous tetraploids as a source of materials for use in breeding experiments. Diagnostic features found useful in identifying nucellar tetraploids were leaf shape, petiole blade shape, leaf blade thickness, leaf color, comparative size differences in leaf venation, oil glands, and stomata, stem thickness, and relative size and developmental pattern of the root system. In older or bearing-age plants, nucellar tetraploids may be identified by differences in growth habit, vigor, size, time of growth initiation and bloom, and flower and fruit characteristics. Data are given for tetraploid frequency in glasshouse-grown, first-year nucellar seedlings of 42 populations of 32 clones of different genetic and seed origin and for tetraploid frequency in commercialnursery nucellar seedlings of the Carrizo rootstock clone in two consecutive years. Comparative data are given for quantitative development of roots, stems, and leaves of tetraploids and similar diploid nucellar seedlings. The data suggest that the ability to produce tetraploid apomictic seedlings is a variable genetic trait present in all or nearly all clones able to reproduce by adventitious embryony. Aspects of tetraploid nucellar seedlings that might warrant their testing as tree-size-controlling rootstocks in commercial citrus growing are discussed.     

Pathways of acetate and propionate production in adult Fasciola hepatica

In adult F. hepatica pyruvate is decarboxylated via pyruvate dehydrogenase to acetyl-CoA; acetyl-CoA is then cleaved to acetate via three possible mechanisms (1) carnitine dependent hydrolysis, (2) CoA transferase, (3) reversal of a GTP dependent acyl-CoA synthetase. Of these three systems, CoA transferase has by far the greatest activity. Propionate production by F. hepatica is similar to the mammalian system, succinate being metabolized via succinic thiokinase, methylmalonyl-CoA isomerase, methyl-malonyl-CoA racemase and propionyl-CoA carboxylase to propionyl-CoA. Propionyl-CoA is then cleaved to propionate by the same three pathways as acetyl-CoA. No ATP or GTP production could be demonstrated when acetyl- or propionyl-CoA were incubated with homogenates of F. hepatica. This indicates that carnitine dependent hydrolysis or CoA transferase are the major pathways of acetyl- or propionyl-CoA breakdown. The CoA transferase reaction would result in the conservation of the bond energy although there is no net ATP synthesis.     

5-Methylthioribose kinase. A new enzyme involved in the formation of methionine from 5-methylthioribose.

The presence of a previously unidentified enzyme, tentatively designated 5-methylthioribose kinase, has been demonstrated in cell-free extracts of Enterobacter aerogenes. The enzyme catalyzes the ATP-dependent phosphorylation of 5-methylthioribose. ADP is one of the products of the reaction and, based on functional group analyses, the other product is 5-methylthioribose 1-phosphate. A 40-fold purified enzyme preparation has been obtained from a cell-free extract of E. aerogenes. Activity of the partially purified enzyme is totally dependent on the presence of a divalent cation and a sulfhydryl reagent. The substrate specificity of the enzyme is quite narrow, and the Km values for ATP and 5-methylthioribose are 7.4 X 10(-5) M and 8.1 X 10(-6) M, respectively. These results suggest that 5-methylthioribose kinase may be a primary enzyme involved in the recycling of the methylthio group of 5-methylthioribose back into methionine.     

Covalent binding of proteinases in their reaction with alpha 2-macroglobulin.

Although it is known that most of the plasma proteinase inhibitors form complexes with proteinases that are not dissociated by SDS (sodium dodecyl sulphate), there has been disagreement as to whether this is true for alpha 2M (alpha 2-macroglobulin). We have examined the stability to SDS with reduction of complexes between alpha 2M and several 125I-labelled proteinases (trypsin, plasmin, leucocyte elastase, pancreatic elastase and papain) by gel electrophoresis. For each enzyme, some molecules were separated from the denatured alpha 2M chains, but amounts ranging from 8.3% (papain) to 61.2% (trypsin) were bound with a stability indicative of a covalent link. Proteolytic activity was essential for the covalent binding to occur, and the proteinase molecules became attached to the larger of the two proteolytic derivatives (apparent mol.wt. 111 000) of the alpha 2M subunit. We take this to mean that cleavage of the proteinase-susceptible site sometimes leads to covalent-bond formation between alpha 2M and proteinase. Whatever the nature of this bond, it does not involve the active site of the proteinase, as bound serine-proteinase molecules retain the ability to react with the active-site-directed reagent [3H]Dip-F (di-isopropyl phosphorofluoridate). Our conclusion is that the ability to form covalent links is not essential for the inhibitory capacity of alpha 2M. It may, however, help to stabilize the complexes against dissociation or proteolysis.     

Fibronectin and proteoglycans as determinants of cell-substratum adhesion

When normal or SV40-transformed Balb/c 3T3 cells are treated with the Ca⁺⁺-specific chelator EGTA, they round up and pull away from their footpad adhesion sites to the serum-coated tissue culture substrate, as shown by scanning electron microscope studies. Elastic membranous retraction fibers break upon culture agitation, leaving adhesion sites as substrate-attached material (SAM) (Cells leave “footprints” of substrate adhesion sites during movement by a very similar process.) SAM contains 1–2% of the cell's total protein and phospholipid content and 5–10% of its glucosamine-radiolabeled polysaccharide, most of which is glycosaminoglycan (GAG). By one- and two-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis, there is considerable enrichment in SAM for specific GAGs; for the glycoprotein fibronectin; and for the cytoskeletal proteins actin, myosin, and the subunit protein of the 10 nm-diameter filaments. Fibrillar fibronectin of cellular origin and substratum bound fibronectin of serum origin (cold-insoluble globulin, CIg) have been visualized by immunofluorescence microscopy. The GAG composition in SAM has been examined under different cellular growth and attachment conditions. Heparan sulfate content correlates with glycopeptide content (derived from glycoprotein). Newly attaching cells deposit SAM with principally heparan sulfate and fibronectin and little of the other GAGs. Hyaluronate and chrondroitin proteoglycans are coordinately deposited in SAM as cells begin spreading and movement over the substrate. Cells attaching to serum-coated or CIg coated substrates deposited SAM with identical compositions. The proteoglycan nature of the GAGs in SAM has been examined as well as the ability of proteoglycans to form two classes of reversibly dissociable “supramolecular complexes” - one class with heparan sulfate and glycopeptide-containing material and the second with hyaluronate-chondroitin complexes. Enzymatic digestion of “intact” SAM with trypsin or testicular hyaluronidase indicates that (1) only a small portion of long-term radiolabeled fibronectin and cytoskeletal protein is bound to the substrate via hyaluronate or chondroitin classes of GAG; (2) most of the fibronectin, cytoskeletal protein and heparan sulfate coordinately resist solubilization; and (3) newly synthesized fibronectin, which is metabolically labile in SAM, is linked to SAM by hyaluronate- and/or chondroitin-dependent binding. All of our studies indicate that heparan sulfate is a direct mediator of adhesion of cells to the substrate, possibly by binding to both cell-surface fibronectin and substrate-bound CIg in the serum coating; hyaluronate-chondroitin complexes in SAM appear to be most important in motility of cells by binding and labilizing fibronectin at the periphery of footpad adhesions, with subsequent cytoskeletal disorganization.     

Cysteine auxotrophs of Salmonella typhimurium which grow without cysteine in a hydrogen/carbon dioxide atmosphere.

Cysteine auxotrophs of Salmonella typhimurium mutated in cysB, cysI or cysJ grew with sulphate as a sulphur source when incubated under a hydrogen/carbon dioxide atmosphere. Yields obtained under these conditions were equivalent to those characteristic of wild-type S. typhimurium. The same mutants failed to grow with sulphate as a sulphur source when incubated aerobically. Auxotrophs mutated in cysA, cysC, cysD, cysE, cysG and cysH required cysteine for growth under both incubation conditions. The results suggest that mutations in cysB (regulation of the several cys operons) and also cysI and cysJ (sulphite reductase activity) can be circumvented during anaerobic growth under hydrogen.