The loss of aquatic and riparian plant communities: Implications for their consumers in a riverine food web

Abstract Human induced alterations to rivers and steams have resulted in significant changes to the structure and diversity of riparian and aquatic plant communities. These changes will impact on the dynamics of riverine carbon cycles and food web structure and function. Here we investigate the principal sources of organic carbon supporting local shredder communities across a gradient in different levels of anthropogenic development along riverine reaches, in South Australia. In forested/wooded reaches with minimum to limited development, semi‐emergent macrophytes were the principal sources of organic carbon supporting the local shredder communities. However, in developed reaches, course particulate organic matter and filamentous algae were the principal food sources. The C:N ratios of the food sources in developed reaches were higher than those of their consumers indicating a stoichiometric mismatch. This imbalanced consumer‐resource nutrient ratio in those developed reaches is likely to impose constraints on the growth and reproduction of their aquatic shredder communities with probable knock‐on effects to higher trophic levels.     

Fire season effects on the recruitment of non‐sprouting serotinous Proteaceae in the eastern (bimodal rainfall) fynbos biome,South Africa

Abstract Research in Mediterranean‐climate shrublands in both South Africa and Australia shows that recruitment of proteoid shrubs (non‐sprouting, serotinous Proteaceae) is best after warm‐season (summer and autumn) fires and worst after cool‐season (winter and spring) ones. This pattern has been attributed to post‐dispersal seed attrition as well as size of pre‐dispersal seed reserves. Here we investigate patterns of post‐fire recruitment for four proteoid species in the eastern part of South Africa's fynbos biome, which has a bimodal (spring and autumn) rainfall regime. Despite the lack of significant differences in recruitment between cool‐ and warm‐season burns, we find some evidence for favourable recruitment periods following fires in spring and autumn, immediately before, and coinciding with, the bimodal rainfall peaks. This suggests that enhanced recruitment is associated with conditions of high soil moisture immediately after the fire, and that rapid germination may minimize post‐dispersal seed attrition. In two of the species, we also find a shift from peak flowering in winter and spring in the Mediterranean‐climate part of the fynbos biome, to summer and autumn flowering in the eastern part. Because these two species are only weakly serotinous, warm‐season flowering would result in maximal seed banks in spring, which could explain the spring recruitment peak, but not the autumn one. We conclude that eastern recruitment patterns differ significantly from those observed in the western and central parts of the biome, and that fire management protocols for the east, which are currently based on data and experience from the winter‐rainfall fynbos biome, need to be adjusted accordingly. Fire managers in the eastern fynbos biome should be less constrained by requirements to burn within a narrow seasonal range, and should therefore be in a better position to apply the required management burns.     

Nitrate and glutamate as environmental cues for behavioural responses in plant roots

As roots explore the soil, they encounter a complex and fluctuating environment in which the different edaphic resources (water and nutrients) are heterogeneously distributed in space and time. Many plant species are able to respond to this heterogeneity by modifying their root system development, such that they colonize the most resource-rich patches of soil. The complexities of these responses, and their dependence on the implied ability to perceive and integrate multiple external signals, would seem to amply justify the term 'behaviour'. This review will consider the types of behaviour that are elicited in roots of Arabidopsis thaliana by exposure to variations in the external concentrations and distribution of two different N compounds, nitrate and glutamate. Molecular genetic studies have revealed an intricate N regulatory network at the root tip that is responsible for orchestrating changes in root growth rate and root architecture to accommodate variations in the extrinsic and intrinsic supply of N. The review will discuss what is known of the genetic basis for these responses and speculate on their physiological and ecological significance.     

Epidermal club cells do not protect fathead minnows against trematode cercariae: a test of the anti‐parasite hypothesis

Epidermal club cells of fishes in the superorder ostariophysi have puzzled evolutionary biologists because they were historically linked to chemical alarm signalling and relied on group selectionist explanations. Alternative hypotheses to explain the existence of these cells include the possibility of an anti‐pathogenic or anti‐parasitic function. If this is so, individual fish should invest in increased numbers of club cells after exposure to parasites, and club cells should contain components that reduce the infectivity of skin‐penetrating larvae. Infectivity of cercariae of the trematode Ornithodiplostomum sp. was significantly reduced when exposed to the skin extract of fathead minnows (an ostariophysan), but also to skin extract of mollies (a non‐ostariophysan that lacks club cells), respectively, compared to controls. Moreover, club cell density was not affected by exposure to cercariae. Taken together, these results are inconsistent with an anti‐parasite function for these cells and instead suggest a generic role in response to injury. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 98 , 884–890.     

Noninvasive Estimation of Black Bear Abundance Incorporating Genotyping Errors and Harvested Bear

ABSTRACT Estimating black bear (Ursus americanus) population size is a difficult but important requirement when justifying harvest quotas and managing populations. Advancements in genetic techniques provide a means to identify individual bears using DNA contained in tissue and hair samples, thereby permitting estimates of population abundance based on established mark-capture-recapture methodology. We expand on previous noninvasive population-estimation work by geographically extending sampling areas (36,848 km²) to include the entire Northern Lower Peninsula (NLP) of Michigan, USA. We selected sampling locations randomly within biologically relevant bear habitat and used barbed wire hair snares to collect hair samples. Unlike previous noninvasive studies, we used tissue samples from harvested bears as an additional sampling occasion to increase recapture probabilities. We developed subsampling protocols to account for both spatial and temporal variance in sample distribution and variation in sample quality using recently published quality control protocols using 5 microsatellite loci. We quantified genotyping errors using samples from harvested bears and estimated abundance using statistical models that accounted for genotyping error. We estimated the population of yearling and adult black bears in the NLP to be 1,882 bears (95% CI = 1,389-2,551 bears). The derived population estimate with a 15% coefficient of variation was used by wildlife managers to examine the sustainability of harvest over a large geographic area.     

Long‐term impacts of invasive species on a native top predator in a large lake system

1. Declining abundances of forage fish and the introduction and establishment of non‐indigenous species have the potential to substantially alter resource and habitat exploitation by top predators in large lakes. 2. We measured stable isotopes of carbon (δ¹³C) and nitrogen (δ¹⁵N) in field‐collected and archived samples of Lake Ontario lake trout (Salvelinus namaycush) and five species of prey fish and compared current trophic relationships of this top predator with historical samples. 3. Relationships between δ¹⁵N and lake trout age were temporally consistent throughout Lake Ontario and confirmed the role of lake trout as a top predator in this food web. However, δ¹³C values for age classes of lake trout collected in 2008 ranged from 1.0 to 3.9‰ higher than those reported for the population sampled in 1992. 4. Isotope mixing models predicted that these changes in resource assimilation were owing to the replacement of rainbow smelt (Osmerus mordax) by round goby (Neogobius melanostomus) in lake trout diet and increased reliance on carbon resources derived from nearshore production. This contrasts with the historical situation in Lake Ontario where δ¹³C values of the lake trout population were dominated by a reliance on offshore carbon production. 5. These results indicate a reduced capacity of the Lake Ontario offshore food web to support the energetic requirements of lake trout and that this top predator has become increasingly reliant on prey resources that are derived from nearshore carbon pathways.     

Effects of shoreline development on the nearshore environment in large deep oligotrophic lakes

1. In large deep oligotrophic lakes, the shallow nearshore waters may provide the most important habitat for animals to feed and breed, and it is this area of the lake where humans are most likely to have initial impacts as the shoreline is developed. Nutrients in fertilizers, sediments and sewage effluents are likely to be rapidly intercepted by nearshore algae at the lake edge, having heterogeneous effects nearshore before offshore effects are noted. 2. Here we examined the spatially explicit effects of residential development on nearshore periphyton communities in three large deep oligotrophic lakes that have all experienced modest residential development in the Pacific Northwest of the United States. We demonstrate that substantial nearshore changes in the basal food web are detectable even with low levels of shoreline development. These changes can potentially affect whole‐lake food web dynamics. 3. For our primary study site (Lake Crescent, Washington, USA), we found that algal biomass and accumulation of detritus were higher at developed sites. In addition, both macroinvertebrate and periphyton communities exhibited a shift in composition with more detritivores and filamentous green algae at developed sites. These differences were more pronounced during the spring than at other times of year. 4. A complementary investigation of field patterns in Priest Lake and Lake Pend Oreille (Idaho, USA) suggested that, although spatial and temporal patterns were idiosyncratic, indicators of productivity and the presence of filamentous green algae were generally higher at developed sites across lakes. 5. Stable isotope signatures and water column nutrients were not useful in distinguishing developed and undeveloped sites, increasing the potential usefulness of periphyton monitoring during early stages of lake development. 6. A laboratory investigation suggested that common macroinvertebrate grazers assimilated a much greater proportion of diatoms than the filamentous green algae that are associated with fertilization at developed sites. 7. These findings have at least two clear implications: (i) periphyton may be used to detect human impacts before disturbance is evident in offshore monitoring programmes and (ii) nearshore impacts in response to modest residential development have the potential to disrupt lake food web dynamics.     

Stream ecosystem responses to the 2007 spring freeze in the southeastern United States: unexpected effects of climate change

Some expected changes in climate resulting from human greenhouse gas emissions are clear and well documented, but others may be harder to predict because they involve extreme weather events or heretofore unusual combinations of weather patterns. One recent example of unusual weather that may become more frequent with climate change occurred in early spring 2007 when a large Arctic air mass moved into the eastern United States following a very warm late winter. In this paper, we document effects of this freeze event on Walker Branch, a well‐studied stream ecosystem in eastern Tennessee. The 2007 spring freeze killed newly grown leaf tissues in the forest canopy, dramatically increasing the amount of light reaching the stream. Light levels at the stream surface were sustained at levels considerably above those normal for the late spring and summer months due to the incomplete recovery of canopy leaf area. Increased light levels caused a cascade of ecological effects in the stream beginning with considerably higher (two–three times) rates of gross primary production (GPP) during the late spring and summer months when normally low light levels severely limit stream GPP. Higher rates of stream GPP in turn resulted in higher rates of nitrate (NO₃^?) uptake by the autotrophic community and lower NO₃^? concentrations in stream water. Higher rates of stream GPP in summer also resulted in higher growth rates of a dominant herbivore, the snail Elimia clavaeformis. Typically, during summer months net NO₃^? uptake and snail growth rates are zero to negative; however, in 2007 uptake and growth were maintained at moderate levels. These results show how changes in forest vegetation phenology can have dramatic effects on stream productivity at multiple trophic levels and on nutrient cycling as a result of tight coupling of forest and stream ecosystems. Thus, climate change‐induced changes in canopy structure and phenology may lead to large effects on stream ecosystems in the future.     

The phylogeny of stiletto flies (Diptera: Therevidae)

The therevoid clade represents a group of four families (Apsilocephalidae, Evocoidae, Scenopinidae and Therevidae) of lower brachyceran Diptera in the superfamily Asiloidea. The largest of these families is that of the stiletto flies (Therevidae). A large‐scale (i.e. supermatrix) phylogeny of Therevidae is presented based on DNA sequence data from seven genetic loci (16S, 18S and 28S ribosomal DNA and four protein‐encoding genes: elongation factor 1‐alpha, triose phosphate isomerase, short‐wavelength rhodopsin and the CPSase region of carbamoyl‐phosphate synthase‐aspartate transcarbamoylase‐dihydroorotase). Results are presented from Bayesian phylogenetic analyses of approximately 8.7 kb of sequence data for 204 taxa representing all subfamilies and genus groups of Therevidae. Our results strongly support the sister‐group relationship between Therevidae and Scenopinidae, with Apsilocephalidae as sister to Evocoidae. Previous estimates of stiletto fly phylogeny based on morphology or DNA sequence data, or supertree analysis, have failed to find significant support for relationships among subfamilies. We report for the first time strong support for the placement of the subfamily Phycinae as sister to the remaining Therevidae, originating during the Mid Cretaceous. As in previous studies, the sister‐group relationship between the species‐rich subfamilies Agapophytinae and Therevinae is strongly supported. Agapophytinae are recovered as monophyletic, inclusive of the Taenogera group. Therevinae comprise the bulk of the species richness in the family and appear to be a relatively recent and rapid radiation originating in the southern hemisphere (Australia + Antarctica + South America) during the Late Cretaceous. Genus groups are defined for all subfamilies based on these results.