Botrytis cinerea: the cause of grey mould disease

Introduction:  Botrytis cinerea (teleomorph: Botryotinia fuckeliana ) is an airborne plant pathogen with a necrotrophic lifestyle attacking over 200 crop hosts worldwide. Although there are fungicides for its control, many classes of fungicides have failed due to its genetic plasticity. It has become an important model for molecular study of necrotrophic fungi.
  Taxonomy:  Kingdom: Fungi, phylum: Ascomycota, subphylum: Pezizomycotina, class: Leotiomycetes, order: Helotiales, family: Sclerotiniaceae, genus: Botryotinia.
  Host range and symptoms: Over 200 mainly dicotyledonous plant species, including important protein, oil, fibre and horticultural crops, are affected in temperate and subtropical regions. It can cause soft rotting of all aerial plant parts, and rotting of vegetables, fruits and flowers post-harvest to produce prolific grey conidiophores and (macro)conidia typical of the disease.
  Pathogenicity:  B. cinerea produces a range of cell-wall-degrading enzymes, toxins and other low-molecular-weight compounds such as oxalic acid. New evidence suggests that the pathogen triggers the host to induce programmed cell death as an attack strategy.
  Resistance:  There are few examples of robust genetic host resistance, but recent work has identified quantitative trait loci in tomato that offer new approaches for stable polygenic resistance in future.
  Useful websites:  http://www.phi-base.org/query.php , http://www.broad.mit.edu/annotation/genome/botrytis_cinerea/Home.html , http://urgi.versailles.inra.fr/projects/Botrytis/ , http://cogeme.ex.ac.uk     

Social Indices of Breeding Productivity in Parkland Mallards

Abstract Social indices were developed to assess breeding productivity of waterfowl based on weekly roadside surveys of social groupings (i.e., pairs, lone M, flocked M). We calculated social indices for mallard (Anas platyrhynchos) populations breeding on 16 study sites in the Canadian parklands from 1993 to 1998 using 7 previously developed indices. We also calculated duckling:pair ratios from our roadside counts, and we obtained independent measures of nesting effort, nesting success, female success, and fledging rate for these same 16 sites from a concurrent telemetry study. Social indices were correlated (r² = 0.28-0.67) with telemetry-based measures of breeding productivity in 5 of 7 cases, with the strongest relationships deriving from indices that emphasized renesting effort. The 2 ineffective social indices (r² ≤ 0.13) both measured early onset of nesting activity. Duckling:pair ratios could be calculated more easily from the same survey data and also were correlated (r² = 0.26-0.48) with measures of breeding productivity. Because surveys measuring late-nesting effort also can enumerate early hatched ducklings, we recommend that waterfowl researchers use duckling:pair ratios rather than social indices because ducking:pair ratios are more easily interpretable. Development of sightability-adjustment factors for pair and duckling surveys could further enhance the utility of duckling:pair ratios as indices of breeding productivity in mallards.     

Nest-site selection in two eublepharid gecko species with temperature-dependent sex determination and one with genotypic sex determination

At present, most turtles, all crocodilians, and several lizards are known to have temperature-dependent sex determination (TSD). Due to the dependence of sex determination on incubation temperature, the long-term survival of TSD species may be jeopardized by global climate changes. The current study was designed to assess the degree to which this concern is justified by examining nest-site selection in two species of Pattern II TSD geckos (Eublepharis macularius and Hemitheconyx caudicinctus) and comparing these preferences with those of a species with genotypic sex determination (GSD) (Coleonyx mitratus). Temperature preferences for nest sites were found to be both species-specific and female-specific. While H. caudicinctus females selected a mean nest-site temperature (32.4°) very close to the upper pivotal temperature (32°C) for the species, E. macularius females selected a mean nest-site temperature (28.7°C) well below this species' lower pivotal temperature (30.5°C). Thus, the resultant sex ratios are expected to differ between these two TSD species. Additionally, nest-site temperatures for the GSD species were significantly more variable (SE=+0.37) than were temperatures for either of the TSD species (E. macularius SE=±0.10; H. caudicinctus SE =+ 0.17), diereby further demonstrating temperature preferences within the TSD species.     

Translocation of Some Anions, Cations, and Acids in Turnip (Brassica napus L.) Mitochondria

The translocation of various anions, cations, and acids acrossthe membrane system of turnip mitchondria has been investigatedby light scattering techniques. The results imply that the membranesof turnip mitochondria are not permeable to choline, K⁺, Na⁺,, , , and . It has been established that Cl^–,, and SCN– passively permeate the mitochondrial membrane. It is probable that permeates as NH₃ and that and cross the membrane either as the corresponding acid or on ananion/ hydroxide antiporter. The alkali metals Na⁺ and K⁺ equilibrateacross the membrane via specific H⁺/Na⁺ and H⁺/K⁺ antiporters,having similar activity at neutral pH.     

DNA Biosynthesis in Chloroplasts: I. CHARACTERIZATION OF AND DEVELOPMENTAL VARIATION IN BOTH LIGHT- AND ATP-DRIVEN THYMIDINE INCORPORATION INTO DNA IN ISOLATED INTACT CHLOROPLASTS

Intact chloroplasts from young pea leaves were able to incorporate[³H]thymidine into DNA at relatively high rates (50 pmol mg^–1chlorophyll h^–1 or more), using light as the sole energysource. The intact plastids were also able to synthesize DNAin darkness, but only if ATP and MgCl₂ (MgATP) were both present.The rates of MgATP-driven assimilation in darkness were equalto or greater than light-driven activity. Neither light nordithiothreitol pretreatments enhanced thymidine incorporationin darkness, suggesting that enzymes of chloroplast DNA (ctDNA)biosynthesis are not regulated via a thioredoxin-type system.Although exogenous nucleosides (other than [³H]thymidine) werenot an absolute requirement, dramatically elevated rates ofincorporation (over 300 pmol mg^–1 chlorophyll h^–1)were seen when adenosine, cytidine, guanosine and thymidinewere supplied in combination (500 mmol m^–3 each). RadiolabelledDNA synthesized by the isolated chloroplasts was prepared usinga new heat extraction method. After digestion by restrictionendonucleases, ctDNA synthesized in organello was found to givetypical autoradiography patterns for chloroplast DNA. ExonucleaseIII studies suggested that 5% to 15% of the newly synthesizedDNA might be in a closed circular form. MgATP-driven synthesisin darkness was highly age-dependent. Chloroplasts from young(6 to 8-d-old) plants, or alternatively the youngest leavesof more mature plants, were 4–10 times more active thanthose from older tissues. Although these data do not establishconclusively that replication-type synthesis was occurring inthe isolated chloroplasts, they are consistent with this suggestion. Key words: Chloroplast DNA replication, isolated chloroplasts, chloroplast DNA synthesis     

The changing ecosystem of a shallow, brackish lake, Hickling Broad, Norfolk, U.K. II. Long-term trends in water chemistry and ecology and their implications for restoration of the lake

• 1 Hickling Broad underwent major changes from a clear water, charophyte-dominated state in the decades previous to 1970 to a turbid, phytoplankton-dominated state by the mid 1970s. These changes were complexly linked with increasing eutrophication by black-headed gulls and increased salinity due to agricultural changes in the catchment.
• 2 At the turn of the 1970s, the lake began to change again and during the 1980s a submerged plant community, of tall, vigorously growing species (e.g. Myriophyllum spicatum, Patamogeton pectinatus) had recovered, despite a major reduction in the roosting gull population, no change in salinity, and only small reductions in phytoplankton biomass and total phosphorus concentration.
• 3 Recovery of the plants may be linked to grazing of periphyton on them by an increased population of a mysid Neomysis integer which had been suppressed by toxicity from an alga, Prymnesium parvum formerly stimulated by the ingress of gull guano.
• 4 A cladoceran community present in the clear-water phase has not recovered and may be suppressed by continued high salinities. Further restoration of the lake requires displacement of the large phytoplankton biomass and this might best be contemplated by land use changes leading to lowered salinity and predicted recovery of grazing Cladocera.
• 5 Models are given which summarize the likely workings of the system in the early twentieth century, the mid-twentieth century, the 1970s and the late 1980s.

     

HUNGER OVERCOMES FEAR IN NASSARIUS FESTIVUS, A SCAVENGING GASTROPOD ON HONG KONG SHORES

On protected intertidal sand flats, virtually worldwide, nassariidsnails scavenge carrion. Typically, they lie in repose beneaththe sand surface but emerge to feed when chemoreceptors detectcarrion. Distance from the potential food influences whetherthey move towards it and, if they do, whether they obtain ameal before it is consumed by others. This study shows that the rate at which Nassarius festivus movestoward food bait is similar for starved and well-fed individuals.That is, when individuals decide to feed, the rate at whichthey move toward food is always approximately the same. Thisstudy exposes another facet of nassariid nutrition related tothe degree of hunger. Recently fed individuals, i.e., thosewhich have fed for < 14 days, will cease feeding and departpalatable food if crushed conspecifics are added to it. Individualswhich have not fed for > 14 days tend to remain feeding,despite the addition of crushed conspecifics. Another studyhas shown that N. festivus consumes sufficient energy from afed-to-satiation meal to sustain it in repose for 20 days.These experiments clarify the observation. Between 14 to 20days since its last meal, N. festivus will feed when the possibilityarises, despite potentially adverse consequences. That is, hungerovercomes the fear of being consumed at a feeding assemblagebecause, without feeding, the alternative may be death by starvation.Thus, a nassariid makes decisions about whether or not to feed.The fear of predation causes N. festivus to abandon a meal ifthe previous one was obtained within a fortnight but, thereafter,it will risk predation to avoid starvation. (Received 14 March 1994; accepted 7 July 1994)     

Development of species-specific primers for the ectoparasitic nematode species Xiphinema brevicolle, X. diffusum, X. elongatum, X. ifacolum and X. longicaudatum (Nematoda: Longidoridae) based on ribosomal DNA sequences

The objective of this study was to develop single‐step PCR species‐specific primers that reliably discriminate four economically important Xiphinema species (X. brevicolle, X. elongatum, X. ifacolum and X. longicaudatum) and X. diffusum that is taxonomically very similar to X. brevicolle. Each species‐specific reverse primer was located in the ITS‐1 rDNA region and was used in combination with a universal forward primer located in the 18S rDNA gene. Primer reliability was confirmed by screening seven and 11 populations, respectively of X. diffusum and X. elongatum. Potential species‐specific primers were also identified for X. brevicolle, X. longicaudatum and X. ifacolum, however too few populations of these species were available to thoroughly assess their reliability. For all species‐specific primers, specificity was demonstrated by the absence of cross‐reactions with 14 non‐target Xiphinema species. Multiplex PCR was effective and reproducible for two (X. longicaudatum and X. ifacolum) or three (X. brevicolle, X. diffusum and X. elongatum) of the target nematode species, thus improving the applicability of the diagnostic primers.     

DEVELOPMENT AND EVALUATION OF A RAPID ENZYME-LINKED IMMUNOFILTRATION ASSAY (ELIFA) AND AN ENZYME-LINKED IMMUNOSORBENT ASSAY (ELISA) FOR THE DETECTION OF STAPHYLOCOCCAL ENTEROTOXIN B

An enzyme-linked immunofiltration assay (ELIFA) and a microtitre plate enzyme-linked immunosorbent assay (ELISA) were developed and compared for their ability to detect staphylococcal enterotoxin B (SEB). The double antibody capture format was used for both assays. Factors which improved the sensitivity of the ELIFA system were (1) addition of casein and thimerosal to the antigen dilution buffer; (2) addition of polyethylene glycol (MW 6000) to the detection and conjugate antibody dilution buffers; and (3) washing with diethanolamine buffer prior to addition of the substrate/chromogen. The ELIFA system had a turnaround time of approximately 1 h and a detection limit of 1 ng/mL of purified SEB. The ELISA had a total turnaround time of 21 h, or 3 h using plates pre-coated overnight with the capture antibody. The detection limit of the ELISA for purified SEB was 0.05 ng/mL. The detection limit of SEB in cheese samples spiked with purified enterotoxin and subjected to a simple extraction procedure was 1 ng/mL and 0.1 ng/mL of extract, with the ELIFA and the ELISA, respectively.     

Impact of 21st century climate change on the Baltic Sea fish community and fisheries

The Baltic Sea is a large brackish semienclosed sea whose species-poor fish community supports important commercial and recreational fisheries. Both the fish species and the fisheries are strongly affected by climate variations. These climatic effects and the underlying mechanisms are briefly reviewed. We then use recent regional – scale climate – ocean modelling results to consider how climate change during this century will affect the fish community of the Baltic and fisheries management. Expected climate changes in northern Europe will likely affect both the temperature and salinity of the Baltic, causing it to become warmer and fresher. As an estuarine ecosystem with large horizontal and vertical salinity gradients, biodiversity will be particularly sensitive to changes in salinity which can be expected as a consequence of altered precipitation patterns. Marine-tolerant species will be disadvantaged and their distributions will partially contract from the Baltic Sea; habitats of freshwater species will likely expand. Although some new species can be expected to immigrate because of an expected increase in sea temperature, only a few of these species will be able to successfully colonize the Baltic because of its low salinity. Fishing fleets which presently target marine species (e.g. cod, herring, sprat, plaice, sole) in the Baltic will likely have to relocate to more marine areas or switch to other species which tolerate decreasing salinities. Fishery management thresholds that trigger reductions in fishing quotas or fishery closures to conserve local populations (e.g. cod, salmon) will have to be reassessed as the ecological basis on which existing thresholds have been established changes, and new thresholds will have to be developed for immigrant species. The Baltic situation illustrates some of the uncertainties and complexities associated with forecasting how fish populations, communities and industries dependent on an estuarine ecosystem might respond to future climate change.