Isolation and characterization of 102 new microsatellite loci in Murray cod,Maccullochella peelii peelii (Percichthyidae), and assessment of cross‐amplification in 13 Australian native and six introduced freshwater species

We have isolated 102 polymorphic microsatellite loci from an enriched Murray cod DNA library and also assessed their amplification success in 13 native and six introduced freshwater fish species. The loci will serve the dual purpose of assessing wild population genetic structure for future conservation efforts, and for identifying markers for key quantitative trait loci important for aquaculture.     

Does mobility explain variation in colonisation and population recovery among stream fishes?

1. Colonisation and population recovery are crucial to species persistence in environmentally variable ecosystems, but are poorly understood processes. After documenting movement rates for several species of stream fish, we predicted that this variable would influence colonisation rates more strongly than local abundance, per cent occupancy, body size and taxonomic family. We also predicted that populations of species with higher movement rates would recover more rapidly than species with lower movement rates and that assemblage structure would change accordingly. 2. To test these predictions, we removed fishes from a headwater and a mainstem creek in southwest Virginia and monitored colonisation over a 2‐year period. Using an information–theoretic approach, we evaluated the relative plausibility of 15 alternative models containing different combinations of our predictor variables. Our best‐supported model contained movement rate and abundance and was 41 times more likely to account for observed patterns in colonisation rates than the next‐best model. Movement rate and abundance were both positively related to colonisation rates and explained 88% of the variation in colonisation rates among species. 3. Population recovery, measured as the per cent of initial abundance restored, was also positively associated with movement rate. One species recovered within 3 months, most recovered within 2 years, but two species still had not recovered after 2 years. Despite high variation in recovery, the removal had only a slight impact on assemblage structure because species that were abundant in pre‐removal samples were also abundant in post‐removal samples. 4. The significance of interspecific variation in colonisation and recovery rates has been underappreciated because of the widely documented recovery of stream fish assemblages following fish kills and small‐scale experimental defaunations. Our results indicate that recovery of the overall assemblage does not imply recovery of each component species. Populations of species that are rare and less mobile will recover more slowly and will be more vulnerable to extinction in systems where chemical spills, hydrological alteration, extreme droughts and other impacts are frequent.     

A comparison of the trophic transfer of fatty acids in freshwater plankton by cladocerans and calanoid copepods

1. Analyses of zooplankton fatty acid (FA) composition in laboratory experiments and samples collected from lakes in New Zealand spanning a wide gradient of productivity were used to assess the extent to which FAs might infer their diet. We used the cladocerans, Daphnia and Ceriodaphnia, and the calanoid copepod, Boeckella, as test organisms, and monocultures of cryptophytes, chlorophytes and cyanobacteria as food. Based on reproductive success, cryptophytes were the highest food quality, chlorophytes were intermediate and cyanobacteria the poorest. 2. Several FA groups were highly correlated between zooplankton and their diets. They were monounsaturated fatty acids (MUFAs), and ω3 and ω6 polyunsaturated fatty acids (PUFAs) for cladocerans, and saturated fatty acids (SAFAs) and ω3 PUFAs for copepods. Several FAs varied significantly less in the zooplankton than in their monoculture diets, e.g. MUFAs in Daphnia, and ω3 and ω6 PUFAs in Ceriodaphnia, despite clear dietary dependency for these FAs. 3. Zooplankton collected from lakes in New Zealand had more eicosapentaenoic acid (EPA) (Daphnia), more highly unsaturated ω3 and ω6 FAs (C₂₀, C₂₂; Daphnia, Ceriodaphnia, Boeckella) and less ω3 C₁₈ PUFAs (Daphnia, Ceriodaphnia, Boeckella) and ω6 C₁₈ PUFAs (Daphnia, Ceriodaphnia) than measured in the same species reared on phytoplankton in the laboratory. 4. Analyses of FA composition of seston and freshwater zooplankton globally showed that, in general, zooplankton had a significantly higher proportion of arachidonic acid and EPA than seston, and copepods also had a higher percentage of docosahexaenoic acid than seston. 5. These results suggest that zooplankton selectively incorporate the most physiologically important FAs. This could be a consequence of preferential assimilation, selective feeding on more nutritious cells or locating and feeding within higher food quality food patches.     

Bighorn Sheep Abundance Following a Suspected Pneumonia Epidemic in Rocky Mountain National Park

Abstract: Anecdotal evidence of a pneumonia epizootic among bighorn sheep (Ovis canadensis canadensis) in Rocky Mountain National Park (RMNP), Colorado, USA, during the mid-1990s prompted park officials to examine the current condition of the herds. Here we present a mark—resight study design to estimate population abundance that, in many circumstances, is a reliable and cost-effective alternative to traditional mark—recapture or to indices of population abundance. We captured 59 adult females and radiocollared them via helicopter net-gunning during winter 2002–2003. From ground resighting surveys conducted May—September, we estimated the total RMNP bighorn population at 389.9 (SE = 34.9, CI = 327.2–464.6) in 2003 and 366.4 (SE = 34.7, CI = 304.4–441.0) in 2004. Previous abundance estimates suggest a park-wide decline has occurred between the late 1980s and the suspected pneumonia epidemic of the mid-1990s. Although the 2 years of data from our study are not enough to predict whether the herds are capable of recovering to previous levels, they provide park officials the tools necessary to make the most informed decisions for future monitoring and management of this fragile species.     

Optimizing Radio Retention and Minimizing Radio Impacts in a Field Study of Upland Sandpipers

Abstract: Two challenges in wildlife telemetry are optimizing the duration of transmitter attachment and minimizing the impacts of radios on the behavior and demography of the study animal. We tested 4 methods of radio attachment for a breeding population of upland sandpipers (Bartramia longicauda) under natural conditions at a tallgrass prairie site in Kansas, USA. To estimate radio retention and weekly survival rates, we used the nest survival model of Program MARK. Radio retention was lowest at the start and the end of the breeding period. The expected duration of radio retention was 1.8 years for a leg-loop harness, 40 days for radios glued to clipped feathers, 26 days for radios glued directly to feathers, and 7 days for radios glued to bare skin. Few radiomarked birds died during our study, but 4 of 8 mortality events were discovered within one week of radiomarking. Both glue and harnesses increased predation risk immediately after radio attachment. The weekly probability of survival was high after a 1-week acclimation period, and the expected survival for a 10-week breeding period was similar in males and females. Attachment of radios with glue had no effect on annual return rates. However, attachment of radios with leg harnesses resulted in lower return rates among radiomarked birds than birds without radios. Radios attached with glue were shed in <1 year but radios attached with harnesses were retained for up to 1-2 years. Our results indicate a tradeoff between optimizing radio retention and minimizing impacts on demography. Glue techniques had retention rates that were suitable for only short-term studies, but attachment with glue had no long-term effect on annual return rates. Leg harnesses provided effective radio retention that had little effect on survival rates during the stationary breeding period, but resulted in lower annual return rates. Robust estimates of radio retention and survival will assist researchers in selecting attachment techniques that best meet the study goals of future telemetry projects.     

Convergent body flattening in a clade of tropical rock-using lizards (Scincidae: Lygosominae)

The repeated occurrence of similar morphologies in organisms from similar habitats provides good evidence of convergent selection, and convergent patterns of evolutionary change. In lizards, a flattened morphology has often been noted; however, whether this trait is convergent in specific habitats has never been tested using phylogenetic methods. The present study examined patterns of morphological convergence in 18 species of tropical Lygosomine skinks from three broad habitat categories (generalist, leaf litter-dwelling, and rock-using species). In general, although there where relatively few morphological differences of species from different habitats, phylogenetic analyses revealed that rock-using species have consistently and repeatedly evolved a dorsoventrally flattened head and body. The adaptive basis of this flattened morphology is consistent with both biomechanical predictions of performance (e.g. climbing locomotion) and ecology (e.g. use of rock crevices, camouflage) of species that occupy rocky habitats.  © 2008 The Linnean Society of London, Biological Journal of the Linnean Society , 2008, 94 , 399–411.     

Essential fatty acid content and the phosphorus to carbon ratio in cultured algae as indicators of food quality for Daphnia

1. A series of experiments examined growth of Daphnia magna on three algal diets ( Rhodomonas minuta , Scenedesmus acutus and Synechococcus sp.) at varying physiological states [nitrogen and phosphorus (P) limitations] to test whether variation in algal fatty acid and/or elemental composition can predict Daphnia growth.
2. These algae differed widely in their essential fatty acid (EFA) composition while phosphorus (P) or nitrogen limitation had only a small influence on their ω3-polyunsaturated fatty acid (PUFA) content.
3. Individually, algal ω3-PUFA content explained 69% of the variation in the normalised growth of D. magna, while algal phosphorus content explained 11% of the variation. Quantitative models for D. magna growth used both algal ω3-PUFA content and algal C : P ratio as food quality indices. Together, algal ω3-PUFA content and C : P ratio explained 70% of the variation in the normalised growth rate of D. magna .
4. Our results indicate that EFA influenced algal food quality much more strongly than P. The EFA and mineral P impacts appear to be independent.