慢性丙型肝炎患者中丙型肝炎病毒准种变异研究进展

丙型肝炎病毒（HCV）具有较高的变异性,通常以准种的形式分布在感染者的体内,病毒容易逃离机体的免疫监控,因而无法被有效地清除,导致机体很难控制其感染的发展,故易转变成慢性肝炎。HCV准种变异在宿主体内的持续存在对病毒感染的控制、抗病毒药物和疫苗的发展都是一个巨大的挑战。,我们重点阐述近年来关于HCV准种变异及其与慢性丙型肝炎患者的机体免疫、疾病进展、治疗效果之间关系的研究进展。     

Population structure of African buffalo inferred from mtDNA sequences and microsatellite loci: high variation but low differentiation

The African buffalo ( Syncerus caffer ) is widespread throughout sub-Saharan Africa and is found in most major vegetation types, wherever permanent sources of water are available, making it physically able to disperse through a wide range of habitats. Despite this, the buffalo has been assumed to be strongly philopatric and to form large aggregations that remain within separate home ranges with little interchange between units, but the level of differentiation within the species is unknown. Genetic differences between populations were assessed using mitochondrial DNA (control region) sequence data and analysis of variation at six microsatellite loci among 11 localities in eastern and southern Africa. High levels of genetic variability were found, suggesting that reported severe population bottlenecks due to outbreak of rinderpest during the last century did not strongly reduce the genetic variability within the species. The high level of genetic variation within the species was found to be evenly distributed among populations and only at the continental level were we able to consistently detect significant differentiation, contrasting with the assumed philopatric behaviour of the buffalo. Results of mtDNA and microsatellite data were found to be congruent, disagreeing with the alleged male-biased dispersal. We propose that the observed pattern of the distribution of genetic variation between buffalo populations at the regional level can be caused by fragmentation of a previous panmictic population due to human activity, and at the continental level, reflects an effect of geographical distance between populations.     

靶向ASGPR的反义核酸与抗HBV药物联合用药的体外抗HBV作用

研究以宿主基因ASGPR为靶的反义核酸与抗乙肝病毒(hepatitis B virus,HBV)药物联合应用的抗-HBV作用,为HBV感染的联合治疗和用药提供新的思路。以HepG2.2.15细胞为靶细胞,脂质体为载体将靶向ASGPR的硫代反义寡核苷酸(ASODN)转染至HepG2.2.15细胞中,6h后加入抗病毒药拉米夫定(3TC)或阿地福韦(ADV),72h后收集细胞培养液,采用酶联免疫法及荧光定量PCR法测定ASODN与抗-HBV药物联合应用后对细胞培养液中HBsAg、HBeAg及细胞分泌HBV DNA的抑制作用。采用金正均Q值法对数据进行分析。拉米夫定(3TC)和阿地福韦(ADV)分别与ASODN联用对HBsAg的抑制呈相加或协同作用。随着ADV浓度的增加,两药的协同作用下降。3TC与ASODN联用对HBeAg的抑制呈拮抗、相加和协同作用,其拮抗作用随着3TC浓度的增加逐渐减弱。ADV与ASODN联用对HBeAg的抑制只呈相加作用。3TC和ADV分别与ASODN联用对HBV DNA的抑制均表现为相加作用或协同作用,取ADV0.5μmol/L与取ASODN0.2μmol/L联用时对HBV DNA的抑制率可提高到72.6%。ASODN在一定条件下分别与3TC及ADV联用有相加或协同抗HBsAg、HBeAg及HBV DNA的表达,尤以抗HBsAg作用显著增强。     

Records of palaeo‐seawater condition from oxygen‐isotope profiles of early Pleistocene fossil molluscs from the Seoguipo Formation (Korea)

Kim, J.K., Khim, B.‐K., Woo, K.S., & Yoon, S.H. 2009: Records of palaeo‐seawater condition from oxygen‐isotope profiles of early Pleistocene fossil molluscs from the Seoguipo Formation (Korea). Lethaia, Vol. 43, pp. 170–181. High‐resolution δ¹⁸O profiles of early Pleistocene fossil molluscs (Mizuhopecten tokyoensis hokurikuensis) from the shallow‐marine sedimentary Seoguipo Formation (Korea) were found to exhibit distinct annual cycles identified by their unique seasonality (δ¹⁸O amplitude). A direct comparison of fossil δ¹⁸O profiles with that of living shells (Amusium japonicum japonicumi) indicated that the palaeoseawater conditions differed from present‐day seawater. Specifically, the positive δ¹⁸O shift in the isotope profile of the fossil specimens relative to that of the living mollusc shell reflected that palaeotemperature was lower than that today. However, a comparison of the coldest palaeotemperatures (determined from the heaviest δ¹⁸O values of fossil shells), with the present‐day winter temperatures indicates that temperature variation alone cannot account for the entire positive δ¹⁸O offset. These findings indicate that variation in the seawater δ¹⁸O_w values plays a dominant role in the biogenic carbonate precipitation of fossils. Thus, the fossil shells obtained from stratigraphic units suggest different palaeoenvironmental conditions, including lower temperatures and ¹⁸O‐enriched glacial seawater, when compared with the present‐day conditions. The Seoguipo Formation records at least five cycles of relative sea‐level fluctuations, with changes in fossil δ¹⁸O amplitudes separated by sequence boundaries likely to reflect variations of unique palaeoseawater condition, although the oxygen‐isotope profile of fossil molluscs appears to provide a snap‐shot of the palaeoclimatic signature. □Early Pleistocene, mollusc fossils, oxygen isotope, palaeoenvironment, seawater temperature.     

Use of an individual-based model to forecast the effect of climate change on the dynamics, abundance and geographical range of the pest slug Deroceras reticulatum in the UK

Slugs are serious agricultural pests and their activity is strongly driven by ambient temperature and soil moisture. The strength of this relationship has been shown through the development of a deterministic model, based upon temperature and soil moisture conditions alone, which accurately describes the population dynamics and abundance of Deroceras reticulatum . Because of this strong climatic dependence, slug abundance and dynamics are likely to be affected by climate change. We used a validated individual-based model (IbM) of D. reticulatum , to assess the effects of climate change on the abundance of this species in the UK. Climatic scenarios were based on the UKCIP02 predictions and constructed using the LARS-WG stochastic weather generator. The IbM of slugs predicted population dynamics at three time slices (2020s, 2050s and 2080s), and two scenarios of greenhouse gas emissions. The maximum generation number, the number of population peaks, the number of slug-days in each season, the percentage of years when the population passes over a threshold for damage and the percentage of years in which populations go extinct were investigated. Currently, the south-west of the UK has the best conditions for D. reticulatum to thrive, with the north-east of Scotland having the most adverse. By 2080 under both low- and high-emissions scenarios, the north and west of Scotland will have the most favourable conditions for the survival of this species and the east of the UK and Scotland will have the harshest. By 2080 the climate in the north-west of Scotland will become more like the current climate in south-east England, which explains the shift in the pattern of abundance. The north-west of Scotland will have increased slug damage and south-west England and west-Wales will have decreased slug damage with some changes becoming evident by 2020.     

Stem tissue mass density is linked to growth and resistance to a stem‐boring insect in Alternanthera philoxeroides

To investigate how stem anatomical structure is linked to growth and resistance to stem‐boring insects in a herbaceous species, six populations of alligatorweed (Alternanthera philoxeroides) were grown in a common garden. Stem growth rate (GR) of A. philoxeroides and pupation rate as an estimate of resistance to a stem‐boring insect (Agasicles hygrophila) were quantified. Stem tissue mass density (TMD) was measured and stem anatomical traits were analysed on cross‐sectional areas (CSA). Stem TMD was positively correlated with resistance (i.e. negatively correlated with pupation rate) and negatively correlated with GR. Stem cortex CSA (%) and vascular bundle (VB) density (no./mm²) were positively related to stem TMD and negatively related to pupation rate. The GR was positively related to VB CSA (%) and negatively related to VB density. These results suggest that stem TMD, which results from a high fraction in cortex CSA and high VB density, is a key determinant of resistance to a stem‐boring specialist in A. philoxeroides. The high resistance of plants with higher stem TMD may partially impose a cost to plant growth.     

Survival of caddis larvae in relation to their case material in a group of temporary and permanent pools

1. The occurrence of larvae of Limnephilus coenosus and L. vittatus (Trichoptera) was recorded in 103 rock pools both before and after the dry periods in spring–summer (April–May and July–early August), when a great number of the pools dried out. In early spring, 84% of the pools sampled contained larvae of at least one of the species. Limnephilus coenosus larvae were present in a higher proportion of pools that later dried out than in the permanent ones, while L. vittatus larvae were predominantly found in permanent pools. Larvae of both species were found together in 31% of the inhabited pools.
2. Laboratory experiments, designed to elucidate differential survival under drought conditions, demonstrated that the organic cases of L. coenosus larvae held water more efficiently than did the mineral L. vittatus cases. Full-grown (fifth instar) L. coenosus larvae also survived dry conditions better than did L. vittatus larvae. The higher survival of L. coenosus was due to a combination of drought-resistant case material and a higher survival ability of the larvae themselves.
3. Limnephilus vittatus larvae were restricted by their low capability to withstand desiccation, although case material and food were available for L. vittatus larvae in all pools. Absence of case material and high-quality food in many pools, however, restricted the presence of L. coenosus larvae, but this species did not suffer from heavy mortality because of desiccation and all pool populations of L. coenosus survived until pupation.
4. The differences in species composition in these temporary and permanent pools can be explained by the differential site selection by ovipositing females, as well as by larval survival. The intrinsically greater survival of L. coenosus larvae during drought, together with the water-retaining properties of the cases, allowed this species to exploit stressful and risky habitats, such as temporary pools.     

Morphogenic Potentialities of Flower Buds of Kalanchoe pinnata Pers. grown in vitro

Excised flower buds of Kalanchoe pinnata Pers. representingtwo early stages of development (designated sets I and II),were cultured on modified White's medium (WB). They failed toattain full development on WB or on WB containing any of thefollowing supplements: indole-3yl-acetic acid (IAA), 2,4-dichlorophenoxyaceticacid (2,4-D), naphthaleneacetic acid (NAA), kinetin, or coconutmilk (CM). A slight stimulation of the growth of corolla wascaused by kinetin (10 ppm). IAA (I ppm) and NAA (I ppm) inducedrooting from the cut end of the pedicel and from the proliferatedtorus tissue situated between the sepals and petals. 2,4-D (Ippm) either singly or in concert with CM (10 per cent) stimulatedthe formation of shoot buds and root growth. Addition of kinetin(I and 10 ppm) to WB favoured shoot formation, but suppressedrooting. Flower buds of set II developed shoot buds more readilythan those of set I. Thus, the primordia floral organs presentin the immature buds lose their ability for normal morphogenesisunder culture conditions. Buds destined to form flowers canbe made to revert to vegetative growth.