Linkage disequilibrium on chromosome 6 in Australian Holstein-Friesian cattle

We analysed linkage disequilibrium (LD) in Australian Holstein-Friesian cattle by genotyping a sample of 45 bulls for 15 closely-spaced microsatellites on two regions of BTA6 reported to carry important QTL for dairy traits. The order and distance of markers were based on the USDA-MARC linkage map. Frequencies of haplotypes were estimated using the E-M approach and a more computationally-intensive Bayesian approach as implemented in PHASE. LD was then estimated using the Hedrick multiallelic extension of Lewontin normalised coefficient D''. Estimates of D'' from the two approaches were in close agreement (r = 0.91). The mean estimates of D'' for marker pairs with an inter-marker distance of less than 5 cM (n = 13) are 0.57 and 0.51, and for distances more than 20 cM (n = 44) are 0.29 and 0.17, estimated from the E-M and Bayesian approaches, respectively. The Malecot model was fitted for the exponential decline of LD with map distance between markers. The swept radii (the distance at which LD has declined to 1/e (~37%) of its initial value) are 11.6 and 13.7 cM for the above two methods, respectively. The Malecot model was also fitted using map distance in Mb from the bovine integrated map (bovine location database, bLDB) in addition to cM from the MARC map. Overall, the results indicate a high level of LD on chromosome 6 in Australian dairy cattle.     

GROWTH, SURVIVORSHIP, AND POPULATION SIZE IN THE LAND SNAIL RHAGADA CONVICTA COX, 1870 (PULMONATA: CAMAENIDAE) FROM A SEMIARID ENVIRONMENT IN WESTERN AUSTRALIA

Basic characteristics of a population of the camaenid land snailRhagada convicta were studied in a semiarid environment nearNorth West Cape, in Western Australia. Consistent evidence frommark-recapture studies and analysis of size-frequency distributionindicates an average annual increase in shell diameter of 3.6mm, with an average period of 5 years from hatching to reachadult size. These rates are low, compared with most other landsnails studied, including cama-enids from wetter environments.Estimates of mortality rate and the rate of recruitment intothe adult population indicate that the snails live an averageof approximately 5 years after reaching adult size, which meansthat the period of turnover for this population is approximately10 years. The population density was estimated to be 0.8 adultsper m², with a total population size (± s.e.) of 875± 164. The population is very localised, with an estimateddiameter of the neighbourhood area of only 38 m. (Received 28 August 1990; accepted 12 February 1991)     

Geese and their future fortune

Wild goose populations were probably limited by winter food supplies before Man modified their winter range and effectively removed that limitation on population growth. At the same time, reduction of hunting lowered Man-induced mortality and allowed most populations to increase both in Europe and in North America.
This paper considers likely future trends, and, using the population of Barnacle Geese breeding in Svalbard as an example, suggests how numbers might be regulated in a density related manner. The Svalbard Barnacle Goose population has shown a decline in recruitment rate and an increase in the natural mortality rate as numbers have increased. Both of these are reflections of competition on the breeding grounds, though there may be some effects at other times. We suggest that most populations will eventually be limited by resources on the breeding area.
Some of the implications of changes in numbers are that pair-bond stability and breeding area philopatry are less advantageous and in time will become less pronounced as the selective value of these traits are diminished.
We argue that both for applied reasons (conservation, crop damage prediction) and for academic investigations of population processes, long-term studies are vital in the management and understanding of goose populations. A number of features of their life history make geese very suitable subjects for such studies.     

Technical and economic potentials of the unconventional extruded dried Arabic bread wastes in broilers diets

Food waste is one of the major global challenges that have adverse socioeconomic and environmental impacts. Therefore, studying food waste utilization potentials and minimizing its negative consequences becomes imperative. This study aims to assess the technical and economic potentials of substituting corn with unconventional extruded dried Arabic Bread waste (EDABW) in broilers’ diets, in terms of broilers’ performance, carcass characteristic, economic net returns, and income over feed cost (IOFC). One hundred eighty unsexed one-day-old broiler birds of Ross breed were distributed randomly in six treatments (0, 20, 40, 60, 80, and 100% EDABW group) of isocaloric and isonitrogenous diets in a completely randomized design with six replicated (5 chicks/replicate). The investigated traits were broilers’ performance (live body weight, total feed intake, total feed conversion ratio, and total weight gain. Other traits such as carcass weight, abdominal fat, edible offal (liver, heart, and gizzard), eviscerated (breast muscles, drum and thigh muscles, and wings) were weighed and expressed based on a live body weight. Results showed that the 20% replacement level of corn with EDABW generated the highest increase in the live body weight and the eviscerated carcass at about 4.24% g and 4.90%, respectively. On the other hand, the economic analysis showed potential reductions in the broilers’ diet cost and the total broilers' production cost as the levels of corn substitution with by unconventional EDABW increased. The reductions were estimated at 5.1%, 6.3%, 8.4%, 9.3%, and 9.9% at substitution levels of 20%, 40%, 60%, 80%, and 100%, respectively as compared to the control diet. The results also showed a potential increase in the net economic returns of broiler meat as the increase in substitution levels ranged between 3.5–06.8% and 4.3–8.3% as compared to the control diets using the average retail and wholesale prices of broiler meats, respectively. In addition, the maximum IOFC was estimated potentially at a 20% substitution level of corn with EDABW. Conclusively, the study results show promising technical and economic potentials for unconventional EDABW in broilers’ diets that could lead to a thriving industry of unconventional broilers’ diets with high net economic returns and maximum IOFC.     

Associations with habitat versus geographic cohesiveness: size and shape of Bembicium vittatum Philippi (Gastropoda: Littorinidae) in the Houtman Abrolhos Islands

In the Houtman Abrolhos Islands, Western Australia, the direct-developing littorine snail Bembicium vittatum occupies a wide range of habitats, which are replicated across the three major groups of islands. Earlier studies showed that allozyme similarities followed patterns related to gene flow, independent of habitat, providing an excellent opportunity to test for associations with habitat for traits more likely to be adaptively important. As the first test for adaptive divergence, we examined variation in size and shape of shells among 131 populations in the Abrolhos Islands. Two-fold variations were found in width of adults, the allometric coefficient of height with width, and shell height scaled to a standard width. Quantification of habitat characteristics was summarized by principal components analysis. In contrast with the patterns of divergence for allozymes, shell height, adjusted for width, was strongly associated with habitat: flatter shells are found on exposed, vertical shores, while domed, more globose shells predominate in sheltered sites. This association was stronger for shape of adult-sized snails than for height scaled to an arbitrary size, highlighting the importance of using biologically relevant measures. Even highly isolated and allozymically less variable populations in tidal ponds conformed to this association. Because differences in shape are highly heritable in B. vittatum , this association of shape with habitat, independent of patterns of gene flow, indicates local adaptation. Shell size also varied with habitat, but because growth rate is highly plastic, variation in size cannot be interpreted simply in terms of adaptation. Nevertheless, the pattern of variation indicates that, within realized limits, larger size is generally favourable, but may be constrained by local conditions. Thus, variation in size signals the potential for adaptive divergence of life histories among the many, isolated populations of this species.     

A conformational switch‐based aptasensor for the chemiluminescence detection of microRNA

A simple microRNA (miRNA) aptasensor has been developed combining the conformational switch of a streptavidin aptamer and isothermal strand displacement amplification. In the presence of its target miRNA, the allosteric molecular beacon (aMB) probe immobilized on the plate can be ‘switched on' and release the streptavidin aptamer. At the same time, Klenow fragment (3′→5′ exo‐) is utilized to initiate DNA‐strand displacement, which starts the target recycling process. Based on the aptamer' high binding affinity and subsequent catalytic chemiluminescence (CL) detection, this CL strategy is highly specific in distinguishing mature miRNAs in same family. It exhibits a dynamic range of four orders of magnitude with a detection limit of 50 fM, and shows great potential for miRNA‐related clinical practices and biochemical research.