The roles of redox processes in pea nodule development and senescence

Nodule senescence is triggered by developmental and environmental cues. It is orchestrated through complex but poorly characterized genetic controls that involve changes in the endogenous levels of reactive oxygen species (ROS) and antioxidants. To elucidate the importance of such redox control mechanisms in pea root nodule senescence, redox metabolites were analysed throughout nodule development in a commercial pea variety ( Pisum sativum cv. Phoenix) inoculated with a commercial rhizobial strain ( Rhizobium leguminosarum bv. viciae ). Although a strong positive correlation between nitrogenase activity and nodule ascorbate and glutathione contents was observed, the progressive loss of these metabolites during nodule senescence was not accompanied by an increase in nodule superoxide or hydrogen peroxide. These oxidants were only detected in nodule meristem and cortex tissues, and the abundance of superoxide or hydrogen peroxide strongly declined with age. No evidence could be found of programmed cell death in nodule senescence and the protein carbonyl groups were more or less constant throughout nodule development. Pea nodules appear to have little capacity to synthesize ascorbate de novo . l -galactono-1, 4-lactone dehydrogenase (GalLDH), which catalyses the last step of ascorbate synthesis could not be detected in nodules. Moreover, when infiltrated with the substrates l -galactono-1, 4-lactone or l -gulonolactone, ascorbate did not accumulate. These data suggest that ROS, ascorbate and glutathione, which fulfil well recognized, signalling functions in plants, decline in a regulated manner during nodule development. This does not necessarily cause oxidative stress but rather indicates a development-related shift in redox-linked metabolite cross-talk that underpins the development and aging processes.     

Effects of Ethylene on Photosynthesis and Partitioning in Tomato, Lycopersicon esculentum Mill

The extended period of ethylene release from ethephon (2-chloroethylphosphonicacid) after application to intact tomato plants has provideda model system in which the effects of ethylene on photosyntheticmetabolism and carbon partitioning has been studied. Ethylenerelease from leaf tissue after ethephon treatment was 10 timesgreater than that from untreated control leaves. The specificactivity of 14C2H4 released from [14C] ethephon remained constantover several days demonstrating that the ethylene was derivedfrom the applied ethephon. The ethephon-treated plants exhibitedextreme epinasty of the leaves and 24 h after application theflower buds in the first visible cluster had abscised, leafexpansion at the apex had ceased and developing adventitiousroots were visible on the lower stem. Rates of steady-state photosynthesis, respiration, photorespirationand transpiration were the same in treated and control leaves24 h after ethephon application. Both treated and control leavespartitioned similar proportions of newly-fixed 14C from 14CO²into neutral (46.4%), acidic (14.0%), basic (5.0%) and insoluble(34.0%) leaf fractions under steady-state conditions. The speedof 11C-assimilate movement in the stems of control plants (3.62±0.42cm min-1 towards the apex and 4.03±0.15 cm min-1 towardsthe roots) was more rapid than in the ethephon-treated plants(2.90±0.31 cm min-1 upwards and 2.59±0.22 cm min-1downwards). Furthermore, in the control plants 20.0±5.4%of the 14C exported to the plant from the source leaf was transportedtowards the developing flower cluster and young leaves. Twenty-fourhours after ethephon application only 6.5 ±1.7% of theexported 14C was translocated towards the shoot. Contrary tosome reports ethylene did not affect steady-state gas exchangeprocesses while carbon partitioning was significantly alteredindicating that ethylene effects on photosynthetic carbon metabolismare indirect and not due to direct effects on photosyntheticprocesses per se. Key words: Ethylene, photosynthesis, partitioning     

Cost effective prediction of the eutrophication status of lakes and reservoirs

1. Eutrophication is a serious threat in many parts of the world, and identifying the environmental factors that determine the spatial distribution of eutrophicated waterbodies as well as the development of management tools is a challenge. 2. In this study, data from the Ile‐de‐France region were analysed to determine if catchment scale environmental variables could predict concentrations of chlorophyll a (used as a proxy for eutrophication status) of artificial lakes and reservoirs. 3. General additive models (GAM) and random forest models (RF) displayed greater predictive power than generalised linear models, indicating the importance of non‐monotonic relationships. Using RF modelling, very high predictive accuracy was achieved for both continuous and binomial (eutrophic or not) response variables (continuous: R² = 0.715; binomial: kappa = 0.764, 89% of waterbodies were accurately predicted). The better predictive power and robustness of RF versus GAM was attributed to the formers ability to better handle complex interactions between predictors and to account for threshold effects. 4. Our results confirmed the close link between the water quality of lakes and reservoirs and the characteristics of their catchments. Moreover, we also showed that (i) simple (e.g. linear and/or monotonic) relationships between catchment land use and water quality were only found for sub‐regional datasets, and (ii) land use needs to be considered in association with complementary environmental variables (hydromorphological variables) to best assess its impact on water quality.     

Corrélations de croissance entre le mycélium et les rhizomorphes chez le Sphaerostilbe repens

Correlation of Growth between Mycelium and Rhizomorphs in Sphaerostilbe repens In Sphaerostilbe repens Berkeley and Broome, cultured on a solid medium in Petri dishes, growth of mycelium and chizomorphs depends on the thickness of the culture medium underlying the thallus. On shallow layers of agar medium, aggregated units were fewer and rhizomorph growth reduced. Vegetative mycelium which starts growth earlier than rhizomorphs contributed to inhibit the development of these latter. On deep layers of substrate, rhizomorphs were numerous, elongated rapidly, and eventually inhibited undifferentiated mycelium. – There was no evidence for the involvement of any inhibitor substance diffusing into culture medium or located in the thallus. Development of aerial mycelium and rhizomorphs, could, on the contrary, be interpreted as nutritional competition between these two parts of the colony.     

Variations in bark-stripping by red deer Cervus elaphus across Europe

• 1 The literature on bark‐stripping by red deer Cervus elaphus in Europe is reviewed to reveal quantitative variation in this behaviour and relate it to deer density and local characteristics such as dominant tree species, occurrence of artificial feeding, altitude, region and size of the study site. We also review the importance of bark in red deer diets over the seasons and discuss the causes of bark‐stripping, focusing on the significance of bark as food.
• 2 Over the 36 sites examined, the rate of bark‐stripping was highly variable (from 0 to 84% of susceptible trees debarked), with less damage in Scotland than in other European sites for which bark‐stripping rates were higher at high red deer density. Altitude, the size of the study site, the number of dominant tree species and the occurrence of artificial feeding do not significantly relate to the rate of bark‐stripping.
• 3 Bark sometimes made up a large proportion of red deer diet (> 10%), especially in areas with severe winters (high levels of snow), whereas in study sites with mild winters, bark was practically not eaten at all.
• 4 These results suggest that severe bark‐stripping could be related to a reduction in food resource availability. This food availability hypothesis needs to be better documented, dealing particularly with the possible interaction between food availability and red deer density.

     

Characterization of microsatellite loci in longnose dace (Rhinichthys cataractae) and interspecific amplification in five other Leuciscinae species

The longnose dace (Rhinichthys cataractae) appears as a relevant model to address environmental and ecological issues in an evolutionary perspective. Eleven microsatellite markers were characterized for this species. Eight of these loci were highly polymorphic for populations of this species. Between four to 10 loci were also successfully amplified in five closely related species. These markers are believed to be valuable tools for genetic analysis of populations of longnose dace and other Leuciscinae species.     

Environmentally induced phenotypes and DNA methylation: how to deal with unpredictable conditions until the next generation and after

Organisms often respond to environmental changes by producing alternative phenotypes. Epigenetic processes such as DNA methylation may contribute to environmentally induced phenotypic variation by modifying gene expression. Changes in DNA methylation, unlike DNA mutations, can be influenced by the environment; they are stable at the time scale of an individual and present different levels of heritability. These characteristics make DNA methylation a potentially important molecular process to respond to environmental change. The aim of this review is to present the implications of DNA methylation on phenotypic variations driven by environmental changes. More specifically, we explore epigenetic concepts concerning phenotypic change in response to the environment and heritability of DNA methylation, namely the Baldwin effect and genetic accommodation. Before addressing this point, we report major differences in DNA methylation across taxa and the role of this modification in producing and maintaining environmentally induced phenotypic variation. We also present the different methods allowing the detection of methylation polymorphism. We believe this review will be helpful to molecular ecologists, in that it highlights the importance of epigenetic processes in ecological and evolutionary studies.     

Regulation of the pentose phosphate pathway at fertilization in sea urchin eggs

Summary

After fertilization of sea urchin eggs, there is a rapid increase in cellular levels of NADPH, a metabolite utilized in a variety of biosynthetic reactions during early development. Recent studies have shown that a dramatic increase in the activity of the pentose phosphate shunt occurs in vivo shortly after fertilization, consistent with the hypothesis mat this metabolic pathway is a major supplier of NADPH in sea urchin zygotes. One mechanism that may account, in part, for this increase in pentose shunt activity is the dissociation of glucose-6-phosphate dehydrogenase (G6PDH), the first enzyme of the shunt, from cell structural elements. In vitro, G6PDH is associated with the insoluble matrix obtained from homogenates of unfertilized eggs, and in this state, the enzyme is inhibited. Within minutes of fertilization, G6PDH is released as an active, soluble enzyme. A similar solubilization and activation of G6PDH occurs after fertilization of eggs of other marine invertebrates and in mammalian cells in culture stimulated by growth factors. The occurrence of this phenomenon in such diverse cell types, in response to different stimuli, suggests that the redistribution of G6PDH between insoluble and soluble locations may be involved in the regulation of the pentose phosphate shunt during cell activation in general.     

New Proboscideans (Mammalia) from the middle Miocene of Thailand

The proboscidean fauna of the middle Miocene of Thailand consists of five taxa, including four elephantoids and one deinothere. The Thai association is dominated by the genera Stegolophodon and Gomphotherium. Stegolophodon is represented by S. nasaiensis and S. praelatidens. The latter species, considered invalid and possibly conspecific with S. latidens, is re‐erected. Its phylogenetic relationships are discussed. The Thai Gomphotherium matches with G. browni from the middle Miocene of Indo‐Pakistan. However, the open nomenclature is employed for the Thai material because it differs from G. browni in terms of curvature of the upper tusk. Intraspecific molar size variation observed in G. cf. browni and Stegolophodon praelatidens is attributed to sexual dimorphism. The Thai proboscidean asssemblage is mainly endemic compared with other contemporaneous Asian faunas although the recognition of Gomphotherium cf. browni denotes faunal affinities with Pakistan. The biostratigraphical implications of the taxa are examined in a regional context. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 703–721.