Identifying footprints of selection in stocked brown trout populations: a spatio‐temporal approach

Studies of interactions between farmed and wild salmonid fishes have suggested reduced fitness of farmed strains in the wild, but evidence for selection at the genic level is lacking. We studied three brown trout populations in Denmark which have been significantly admixed with stocked hatchery trout (19–64%), along with two hatchery strains used for stocking. The wild populations were represented by contemporary samples (2000–2006) and two of them by historical samples (1943–1956). We analysed 61 microsatellite loci, nine of which showed putative functional relationships [expressed sequence tag (EST)‐linked or quantitative trait loci]. F_ST‐based outlier tests provided support for diversifying selection at chromosome regions marked by three loci, two anonymous and one EST‐linked. Patterns of differentiation suggested that the loci were candidates for being under diversifying hitch‐hiking selection in hatchery vs. wild environments. Analysis of hatchery strain admixture proportions showed that in one wild population, two of the loci showed significantly lower admixture proportions than the putatively neutral loci, implying contemporary selection against alleles introduced by hatchery strain trout. In the most strongly admixed population, however, there was no evidence for selection, possibly because of immigration by stocked trout overcoming selection against hatchery‐derived alleles or supportive breeding practices allowing hatchery strain trout to escape natural selection. To our knowledge, this is the first study demonstrating footprints of selection in wild salmonid populations subject to spawning intrusion by farmed fish.     

Thermal conditioning of fifth-instar Cydia pomonella (Lepidoptera: Tortricidae) affects HSP70 accumulation and insect mortality

Abstract.  Levels of HSP70 protein of fifth-instar codling moth [ Cydia pomonella (L.) (Lepidoptera: Tortricidae)] are determined after conditioning at 35 °C for different times and also after recovery at 22 °C. Protein samples from larvae conditioned for different times are separated by sodium dodecyl sulphate-polyacrylamide gel electrophoresis electrophoresis. Sub-lethal thermal conditioning at 35 °C for 40 min, 2, 6 and 18 h induces new protein bands in the extracts from treated codling moth larvae. Immunodetection with an antibody to a heat-inducible HSP70 indicates a stronger reaction after 35 °C for 2, 6 and 18 h than after 35 °C for 40 min or control and, during the recovery period at 22 °C, the level of heat shock protein decreases. Conditioning of fifth-instar codling moths at 35 °C also induces thermotolerance in the insects and necessitates longer times at a lethal temperature to ensure mortality. Thermotolerance is correlated with the accumulation of heat inducible HSP70 protein.     

BIOACOUSTIC PUBLICATIONS, 1989

ABSTRACT

Coruros Spalacopus cyanus, social fossorial rodents from Chile, use a complex acoustic repertoire with eleven different true vocalisations and one mechanical sound in various behavioural contexts. The complex of contact calls is particularly well differentiated. Juvenile coruros produced six true vocalisations of which four were structurally identical to adult calls. One vocalisation had components of two adult sounds and one occurred only in juvenile animals. Certain calls from the adult repertoire were lacking. The frequencies of sounds of juveniles were considerably higher than those of adults, with many sounds reaching the ultrasonic range. Nevertheless, pure ultrasonic sounds were not recorded.

The frequencies of the analysed sounds of coruros extended from 0.17 to 20.33 kHz with dominant frequency components between 0.17 and 10 kHz. The acoustic properties of calls are suitable for transmission above and below ground, thus providing further indirect evidence that coruros are not strictly confined to an underground way of life. Indeed, the great variability of frequency ranges, with lower frequencies always being included, reflects a specialisation for communication in variable acoustic environments.

The most distinctive and unique vocalisation of coruros is the long duration musical trilling (lasting up to two minutes), which is a long-distance call emitted in alarm and arousal contexts. Recordings of this call from natural burrows in the field in Chile showed similar structural features to vocalisations from captive colonies in the laboratory.

Our findings provide a further example of matching physical properties of vocalisations to the acoustic conditions of the habitat. However, vocalisations in subterranean rodents consist almost exclusively of short-distance calls, the trilling of coruros being the notable exception. Since the selective pressure of the acoustic environment upon the evolution of short-distance vocalisations is probably minimal, we suggest that during their evolution, subterranean mammals have matched their vocalisations primarily to their hearing range and not directly to the acoustics underground. Hearing probably has been the primary target of natural selection, serving not only for communication but also for detection of predators (and, in carnivores, of prey).     

RECENT BIO ACOUSTIC PUBLICATIONS (mainly 1993)

ABSTRACT

Although much research has been done to describe the degradation of sound signals propagating in natural habitats, the directional cues of sound have so far been neglected. This paper describes a first approach to quantifying the degradation of directional cues in sound propagating parallel to the ground in a grassland habitat of orthopteran insects. A matched pair of probe microphones measured the sound amplitude and phase close to the ears of grasshopper carcasses for 12 evenly spaced directions of sound incidence. The degradation was found to increase with frequency and distance from the sound source and to decrease with distance from the ground. The acoustical data were used to predict how well animals with different auditory systems can determine the direction of the sender. At one position in the habitat, the predictions were compared with the pattern of phonotactic responses of live grasshoppers. Amplitude cues appear to degrade much faster with distance than phase cues. Animals exploiting phase cues may therefore maintain a reasonable directional hearing when the amplitude cues no longer make sense. The pressure-difference-receiver type of ears responds to phase differences, and these ears may be particularly suited to overcoming the degradation of directional cues. This suggests that the possession of such ears may be an adaptation not only to small body size (relative to wavelength), but also to the acoustic properties of the habitat.     

BIOACOUSTIC PUBLICATIONS, 1986

ABSTRACT

A common task for researchers of animal vocalisations is statistically comparing repertoires, or sets of vocalisations. We evaluated five methods of comparing repertoires of ‘codas’, short repeated patterns of clicks, recorded from sperm whale (Physeter macrocephalus) groups. Three of the methods involved classification of codas—human observer classification, k-means cluster analysis using Calinski and Harabasz's (1974) criterion to determine k, and a divisive k-means clustering procedure using Duda and Hart's (1973) criterion to determine k. Two other methods used multivariate distances to calculate similarity measures between coda repertoires. When used on a sample coda dataset, observer classification failed to produce consistent results. Calinski and Harabasz's criterion did not provide a clear signal for determining the number of coda classes (k). Divisive clustering using Duda and Hart's criterion performed satisfactorily and, encouragingly, gave similar results to the multivariate similarity measures when used on our data. However, the relative performance of the k-means techniques is likely data dependent, so one method is not likely to perform best in all circumstances. Thus results should be checked to ensure they extract logical clusters. Using these techniques concurrently with multivariate measures allows the drawing of relatively robust conclusions about repertoire similarity while minimising uncertainties due to questionable validity of classifications.     

A molecular characterization of the charismatic Faroe house mouse

Faroe house mice are a ‘classic’ system of rapid and dramatic morphological divergence highlighted by J. S. Huxley during the development of the Modern Synthesis. In the present study, we characterize these charismatic mice using modern molecular techniques, examining specimens from all Faroe islands occupied by mice. The aims were to classify the mice within the modern house mouse taxonomy (i.e. as either Mus musculus domesticus or Mus musculus musculus) using four molecular markers and a morphological feature, and to examine the genetic diversity and possible routes of colonization using mitochondrial (mt) control region DNA sequences and microsatellite data (15 loci). Mice on the most remote islands were characterized as M. m. domesticus and exhibited exceptionally low genetic diversity, whereas those on better connected islands were more genetically diverse and had both M. m. musculus and M. m. domesticus genetic elements, including one population which was morphologically M. m. musculus‐like. The mtDNA data indicate that the majority of the mice had their origins in south‐western Norway (or possibly southern Denmark/northern Germany), and probably arrived with the Vikings, earlier than suggested by Huxley. The M. m. musculus genetic component appears to derive from recent mouse immigration from Denmark. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 102 , 471–482.     

Design and Evaluation of a Simple Signaling Device for Live Traps

Abstract: Frequent checks of live traps require enormous amounts of labor and add human scents associated with repeated monitoring, which may reduce capture efficiency. To reduce efforts and increase efficiency, we developed a trap-signaling device with long-distance reception, durability in adverse weather, and ease of transport, deployment, and use. Modifications from previous designs include a normally open magnetic switch and a mounting configuration to maximize reception. The system weighed <225 g, was effective ≤17.1 km, and failed in <1% of trap-nights. Employing this system, researchers and wildlife managers may reduce the amount of effort checking traps while improving the welfare of trapped animals.     

A new species of Omicrus Sharp (Coleoptera: Hydrophilidae) from Puerto Rico and its larva, the first known larva of Omicrini

A remarkable new species of bromeliadicolous Hydrophilidae, Omicrus ingens sp.n., is described from Puerto Rico. Notes on the habitat and occurrence of the species are given. Larvae found in association with adult beetles are assigned to the same species and described as such. It is the first known larva of the sphaeridiine tribe Omicrini. Comparative notes are given to other hydrophilid larvae, particularly Sphaeridiinae, and preliminary keys to larvae are presented for known subfamilies of Hydrophilidae and known tribes of Sphaeridiinae.