Modelling the spatial dynamics of a recovering species: the Grey Heron Ardea cinerea in France

In many countries, the implementation of measures to protect declining species has led to the recolonization of some areas by bird species within their historic range. There is, however, a lack of quantitative tools for exploring and projecting such large-scale dynamics. Here, we present an approach that makes use of both census and habitat suitability data and integrates them into a spatially explicit model of colonization dynamics (cellular automaton). The Grey Heron Ardea cinerea , which has recently recolonized much of France following legal protection measures, was used as a focal species. Data analysis allowed us to quantify the positive effects of habitat quality on the probability of colonization, and to uncover both positive and negative density-dependent colony settlement processes. Projective simulations then allowed us to determine an inflection point in global colonization dynamics and predict a significant reduction in the colonization rate during the next 50 years. This makes it possible to project the spatial distribution of the species at different timescales, and to estimate the carrying capacity of France for the species (around 1500 colonies).     

Identification and characterization of simple sequence repeat (SSR) markers derived in silico from Brassica oleracea genome shotgun sequences

The availability of sequence data derived from shotgun sequencing programs enables mining for simple sequence repeats (SSRs), providing useful genetic markers for crop improvement. This study presents the development and characterization of 40 SSR markers from Brassica oleracea shotgun sequence and their cross‐amplification across Brassica species. The markers show reliable amplification, genome specificity and considerable polymorphism, demonstrating the utility of SSRs for genetic analysis of commercial Brassica germplasm.     

Population differences in behaviour are explained by shared within‐population trait correlations

Correlations in behavioural traits across time, situation and ecological context (i.e. ‘behavioural syndromes’ or ‘personality’) have been documented for a variety of behaviours, and in diverse taxa. Perhaps the most controversial inference from the behavioural syndromes literature is that correlated behaviour may act as an evolutionary constraint and evolutionary change in one’s behaviour may necessarily involve shifts in others. We test the two predictions of this hypothesis using comparative data from eighteen populations of the socially polymorphic spider, Anelosimus studiosus (Araneae, Theriidae). First, we ask whether geographically distant populations share a common syndrome. Second, we test whether population differences in behaviour are correlated similarly to within‐population trait correlations. Our results reveal that populations separated by as much as 36° latitude shared similar syndromes. Furthermore, population differences in behaviour were correlated in the same manner as within‐population trait correlations. That is, population divergence tended to be along the same axes as within‐population covariance. Together, these results suggest a lack of evolutionary independence in the syndrome’s constituent traits.     

Modulation of syllable period‐selective phonotaxis by prothoracic neurones in crickets (Acheta domesticus): juvenile hormone,picrotoxin and photoinactivation of the ON1 neurones

Abstract In response to model calling songs (CSs), the phonotaxis of female Acheta domesticus ranges from being very selective to unselective. Within 15 min of nanoinjecting juvenile hormone III (JHIII) or picrotoxin (PTX) into the prothoracic ganglion, females become more selective for syllable period (SP) than in pre‐tests. Controls for JHIII experiments, including nanoinjection of acetone into the prothoracic ganglion or nanoinjection of JHIII into the metathoracic ganglion, do not influence selectivity. Similarly, nanoinjection of saline into the prothoracic ganglion and nanoinjection of PTX outside of the prothoracic ganglion does not change the overall selectivity of the female’s phonotaxis. These results indicate that circuits in the prothoracic ganglion modulate the SP‐selectivity of phonotaxis. Photoinactivating both of the ON1 prothoracic auditory interneurones in old females that were previously unselective for SP also results in greater SP‐selectivity during phonotaxis. Evidence suggesting that ON1 has this effect via its inhibitory input to L3 (another prothoracic auditory neurone) includes: photoinactivation of one ON1 neurone causes angular errors in the female’s orientation to CSs at 85 dB (above the threshold of the L3), stimulation with 60 dB CSs (above the threshold of ON1 but below the threshold of L3) does not induce errors in angular orientation, inactivation of ON1 in old crickets results in greater angular errors (85 dB stimulus) than it does when ON1 is inactivated in young females, and photoinactivation of ON1 increases the firing rate of the L3 neurone.     

Mutualism between armoured scale insects and ants: new species and observations on a unique trophobiosis (Hemiptera: Diaspididae; Hymenoptera: Formicidae: Melissotarsus Emery)

The association between African armoured scale insects (Hemiptera: Coccoidea: Diaspididae) and ants belonging to Melissotarsus Emery (Hymenoptera: Formicidae: Myrmicinae) is the only trophobiosis known in which ants do not receive honeydew or nectar in exchange for protection and other services. Food reward for the ants in this mutualism remains unknown, despite repeated suggestions that diaspidids are consumed by the associated ants, thus serving as ‘domestic cattle’. We describe new observations on interactions between Melissotarsus emeryi Santschi and the diaspidid Morganella conspicua (Brain) from South Africa. Worker ants exhibited previously undescribed tending behaviours, most notably a ‘squeezing and licking’ performed on an adult female diaspidid and ‘culling’, in which a worker removed an adult female armoured scale from the host plant. These could represent the gathering of secretory products and the cultivation of an individual for consumption, respectively. An ant exclusion study over 12 days of isolation showed that adult female diaspidids and second‐instar nymphs secreted no wax or exudates that attending ants would ordinarily collect. Workers of M. emeryi did not defend their nest against invading colonies of Crematogaster and other unidentified ants: we hypothesize that the primary mode of defence is maintenance of isolation within galleries. We describe three new ant‐associated diaspidid species: Affirmaspis cederbergensis Schneider sp.n. from South Africa, Diaspis doumtsopi Schneider sp.n. from Cameroon, and Melissoaspis incola Schneider sp.n. from Madagascar. Melissoaspis formicaria (Ben‐Dov) comb.n. is transferred from Morganella (Brain). Diagnostic characteristics for Melissoaspis Ben‐Dov are revised, and additional taxonomic information defining this genus allows ease of identification. An updated identification key to the species of ant‐associated diaspidids is provided. This published work has been registered in ZooBank, http://zoobank.org/urn:lsid:zoobank.org:pub:632C1122-954A-4DE6-B946-8E6AB6A4D27F .     

Fossil isopods associated with a fish skeleton from the Lower Cretaceous of Queensland,Australia – direct evidence of a scavenging lifestyle in Mesozoic Cymothoida

Abstract: A dense assemblage of fossil isopod crustaceans (Brunnaega tomhurleyi Wilson, sp. nov.) from the Lower Cretaceous (Albian) Toolebuc Formation of Queensland, Australia, has been found within the carcass of a large actinopterygian fish, Pachyrhizodus marathonensis (Etheridge). Preservation of fine anatomical details supports referral to the genus Brunnaega Polz, which is herein reassigned to the family Cirolanidae. Furthermore, placement of this taxon within the cirolanid subfamily Conilerinae Kensley and Schotte is significant because the group includes modern species that are well known as voracious scavengers. This isopod–fish association represents the oldest unequivocal evidence of scavenging by Mesozoic cymothoidean isopods on a large vertebrate carcass.     

Landscape genetic analysis of the tropical freshwater fish Mogurnda mogurnda (Eleotridae) in a monsoonal river basin: importance of hydrographic factors and population history

1. We performed spatial genetic analyses, incorporating landscape genetic methods using microsatellite data and phylogeographic analyses using mtDNA data, to identify the principal factors that determine population heterogeneity of the tropical freshwater fish, Mogurnda mogurnda, in the Daly River, northern Australia. We tested the individual and interactive effects of several environmental variables on spatial genetic patterns, including metrics relating to connectivity (i.e. stream distance, maximum stream gradient and elevation), habitat size (i.e. mean annual discharge) and a categorical variable relating to population history, as determined by mtDNA phylogeographic analyses. The Daly River is geomorphologically and hydrologically complex, and M. mogurnda has life history traits that limit its dispersal potential at river basin scales. Thus, we predicted that variables relating to connectivity would be the most important landscape factors driving population structure of the species. 2. Tree‐based phylogeographic analyses indicated four divergent mtDNA lineages within M. mogurnda in the Daly River, although three of the lineages were sympatric in various combinations and did not correspond with microsatellite groups identified by assignment tests. The allopatric mtDNA lineage detected in the uppermost part of the catchment was also identified as being highly differentiated by the microsatellite data, strongly suggesting that it may be a cryptic species. This site was therefore excluded from subsequent landscape genetic analyses. 3. Analyses of Molecular Variance indicated that M. mogurnda has a hierarchical population structure in the Daly River, thus supporting theoretical expectations that hierarchically arranged river habitats in dendritic systems impose hierarchal population structures on lotic species. 4. All landscape genetic analyses rejected stream distance, and supported stream gradient, as the major determinant of spatial genetic variation in M. mogurnda in the Daly River. Support for elevation as a determinant of spatial genetic patterns differed among the landscape genetic methods. Several of the landscape genetic methods also indicate that population history, including secondary contact between divergent and formerly allopatric genetic lineages, has a strong influence on spatial genetic patterns within M. mogurnda in the Daly River. 5. This study demonstrates the need to consider multiple environmental factors, especially factors relating to connectivity, and their interactions in spatial genetic analysis, rather than just geographic distance. Importantly, it demonstrates the need to account for population history and evolutionary divergences in landscape genetic analyses.     

Reassessment of the Lower Cretaceous (Barremian) pliosauroid Leptocleidus superstes Andrews, 1922 and other plesiosaur remains from the nonmarine Wealden succession of southern England

The Lower Cretaceous (upper Berriasian to lowermost Aptian) nonmarine Wealden succession of southern England has been a prolific source of vertebrate fossils for over 180 years. The sequence is most famous for terrestrial reptiles, particularly dinosaurs; however, significant aquatic tetrapod discoveries including rare nonmarine plesiosaurs have also been reported. The record of Wealden plesiosaurs currently incorporates a single valid taxon, Leptocleidus superstes Andrews, 1922a, based on a partial skeleton and skull from the Barremian Upper Weald Clay Formation of Berwick, Sussex. Traditional classifications place this plesiomorphic pliosauroid with basal Jurassic rhomaleosaurids; however, the genus Leptocleidus has since become a ‘waste basket’ for various Cretaceous rhomaleosaurid‐like plesiosaurs from around the globe. In an attempt to clarify this situation, the type specimen of L. superstes was reexamined and redescribed. Previously unrecorded anatomical features were identified including an elongate, gracile paraoccipital process on the exoccipital‐opisthotic, and tooth ornament comprising widely spaced, coarse striations that are restricted to the lingual surface of the crown (mesiodistal ‘carinae’ are absent). Other indeterminate pliosauroid remains (recovered along with coeval elasmosaurids) from the upper Berriasian–Valanginian Hastings Beds Group also exhibit potentially diagnostic traits: an atlas centrum with no anterolateral exposure and with ventral margin formed by the intercentrum; a single‐headed rib articulation on the atlas centrum extending onto the axis centrum; and epipodials that are longer than broad. The placement of L. superstes is controversial in recent phylogenies. To test the competing hypotheses, L. superstes together with all closely related species were rescored into the most comprehensive published phylogenetic data sets of Plesiosauria and Pliosauroidea. Separate maximum parsimony and Bayesian analyses of each matrix unanimously supported a relationship between L. superstes and pliosauroids but could not confirm placement within either Rhomaleosauridae sensu stricto, or a discrete ‘leptocleidoid’ clade. Examination of character states advocating affinities amongst Leptocleidus spp. suggests homoplasy rather than clear homology between what are potentially palaeobiogeographically disparate genus‐level taxa. © 2011 The Linnean Society of London, Zoological Journal of the Linnean Society, 2011, 161 , 663–691.     

Impact of intraguild predation on parasitoid foraging behaviour

1. Trophic interactions between predators and parasitoids can be described as intraguild predation (IGP) and are often asymmetric. Parasitoids (typically the IG prey) may respond to the threat of IGP by mitigating the predation risk for their offspring. 2. We used a system with a facultative predator Macrolophus caliginosus, the parasitoid Aphidius colemani, and their shared prey, the aphid Myzus persicae. We examined the functional responses of the parasitoid in the presence/absence of the predator on two host plants (aubergine and sweet pepper) with differing IGP risk. 3. Estimated model parameters such as parasitoid handling time increased on both plants where the predator was present, but impact of the predator varied with plant species. The predator, which could feed herbivorously on aubergine, had a reduced impact on parasitoid foraging on that plant. IG predator presence could reduce the searching effort of the IG prey depending on the plant, and on likely predation risk. 4. The results are discussed with regard to individual parasitoid's foraging behaviour and population stability; it is suggested that the presence of the predator can contribute to the stabilisation of host–parasitoid dynamics     

Annual methane uptake by temperate semiarid steppes as regulated by stocking rates,aboveground plant biomass and topsoil air permeability

Overgrazing‐induced degradation of temperate semiarid steppes may affect the soil sink for atmospheric methane (CH₄). However, previous studies have primarily focused on the growing season and on single grazing patterns. Thus, the response of annual CH₄ uptake by steppes compared with various grazing practices is uncertain. In this study, we investigated the effects of grazing on the annual CH₄ uptake by two typical Eurasian semiarid steppes (the Stipa grandis steppe and the Leymus chinensis steppe) located in Inner Mongolia, China. The CH₄ fluxes were measured year‐round using static chambers and gas chromatography at 12 field sites that differed primarily in grazing intensities. Our results indicated that steppe soils were CH₄ sinks throughout the year. The annual CH₄ uptake correlated with stocking rates, whereas the seasonality of CH₄ uptake was primarily dominated by temperature. The annual CH₄ uptake at all sites averaged 3.7±0.7 kg C ha^?1 yr^?1 (range: 2.3–4.5), where approximately 35% (range: 23–40%) occurred during the nongrowing season. Light‐to‐moderate grazing (stocking rate≤1 sheep ha^?1 yr^?1) did not significantly change the annual CH₄ uptake compared with ungrazed steppes, but heavy grazing reduced annual CH₄ uptake significantly (by 24–31%, P<0.05). These findings imply that easing the pressure of heavily grazed steppes (e.g. moving to light or moderate stocking rates) would help restore steppe soil sinks for atmospheric CH₄. The empirical equations based on the significant relationships between annual CH₄ uptake and stocking rates, aboveground plant biomass and topsoil air permeability (P<0.01) could provide simple approaches for the estimation of regional CH₄ uptake by temperate semiarid steppes.