Experimental studies of zooplankton–phytoplankton–nutrient interactions in a large subtropical lake (Lake Okeechobee, Florida, U.S.A.)

1. Over a 1-year period, twenty controlled experiments were performed using small mesocosms (20-l clear plastic carboys) and plankton communities collected from four sites in shallow, subtropical Lake Okeechobee, Florida. In replicated treatments, macrozooplankton grazers were excluded by size fractionation (115 μm), and/or nutrients (N and P) were added, and impacts on phytoplankton biomass and productivity were measured after 3-day incubations.
2. In most experiments (fifteen out of twenty), there was no significant effect of zooplankton exclusion on phytoplankton biomass or productivity, but there were significant increases in those attributes due to nutrient additions. The magnitude of the responses was a function of light availability at the collection sites.
3. In three experiments, zooplankton exclusion led to declines in phytoplankton biomass and productivity, suggesting that animals may sometimes have net positive effects on the phytoplankton, perhaps via nutrient recycling.
4. In only two experiments was there evidence of net negative impacts of grazers on the phytoplankton. In both instances, cladocerans ( Daphnia ambigua and Eubosmina tubicen ) were dominant in the zooplankton. However, the increases in chlorophyll a due to zooplankton exclusion were small (5–20%), probably because of the small size and relatively low grazing rates of the cladocerans.
5. The results support the hypothesis that phytoplankton biomass in Lake Okeechobee is little affected by herbivorous macrozooplankton. This may be a common feature of lowland tropical and subtropical lakes.     

Cladistic review of generic taxonomic characters in Xyleborina (Coleoptera: Curculionidae: Scolytinae)

Abstract A cladistic analysis of morphological characters of the subtribe Xyleborina (Curculionidae, Scolytinae) is presented. An examination of individual characters revealed little phylogenetic information in many characters currently used for delimiting genera. Phylogenetically stable characters were used for the evaluation of the contemporary generic concept. The following genera have been recovered as monophyletic: Cnestus, Dryocoetoides, Eccoptopterus, Xylosandrus, Schedlia, Sampsonius and Taurodemus. The following genera have been found to be polyphyletic: Amasa, Ambrosiodmus, Arixyleborus, Coptoborus, Coptodryas, Cryptoxyleborus, Cyclorhipidion, Euwallacea, Leptoxyleborus, Taphrodasus, Theoborus, Webbia, Xyleborinus and Xyleborus. The analysis permitted the resurrection of four genera: Anisandrus, Microperus, Pseudowebbia and Streptocranus. A number of new combinations at specific level are given: Anisandrus cornutus (Schaufuss, 1891), A. dispar (Fabricius, 1792), A. eggersi (Beeson, 1930), A. improbus (Sampson, 1913), A. longidens (Eggers, 1930), A. maiche Stark, 1936, A. obesus (LeConte, 1868), A. sayi Hopkins, 1915, A. apicalis (Blandford, 1894), A. hirtus (Hagedorn, 1904), Microperus myristicae (Schedl, 1939), M. eucalypticus (Schedl, 1938), M. huangi (Browne, 1983), M. intermedius (Eggers, 1923), M. kadoyamaensis (Murayama, 1934), Pseudowebbia armifer (Schedl, 1942), P. seriata Browne, 1963, P. squamatilis (Schedl, 1955), P. trepanicauda (Eggers, 1923), P. curvatus (Browne, 1986), Streptocranus bicolor Browne, 1949, S. bicuspis (Eggers, 1940), S. capucinulus (Schedl, 1942), S. forficatus (Schedl, 1957), S. fragilis Browne, 1949, S. longicauda Browne, 1960, S. longispinis Browne, 1986, S. mirabilis Schedl, 1939, S. usagaricus (Eggers, 1922), S. sexdentatus (Eggers, 1940). The characters most useful for generic‐level taxonomy of Xyleborina were identified and their states refined and illustrated. An accompanying illustrated multiple‐entry electronic key for the updated xyleborine classification has been published on‐line at www.scolytid.msu.edu .     

Dynamic compression counteracts IL-1β induced inducible nitric oxide synthase and cyclo-oxygenase-2 expression in chondrocyte/agarose constructs

Background  

Nitric oxide and prostaglandin E₂ (PGE₂play pivotal roles in both the pathogenesis of osteoarthritis and catabolic processes in articular cartilage. These mediators are influenced by both IL-1β and mechanical loading, and involve alterations in the inducible nitric oxide synthase (iNOS) and cyclo-oxygenase (COX)-2 enzymes. To identify the specific interactions that are activated by both types of stimuli, we examined the effects of dynamic compression on levels of expression of iNOS and COX-2 and involvement of the p38 mitogen-activated protein kinase (MAPK) pathway.     

Introns and reading frames: correlation between splicing sites and their codon positions

Computer analyses of the entire GenBank database were conducted to examine correlation between splicing sites and codon positions in reading frames. Intron insertion patterns (i.e., splicing site locations with respect to codon positions) have been analyzed for all of the 74 codons of all the eukaryote taxonomic groups: primates, rodents mammals, vertebrates, invertebrates, and plants. We found that reading frames are interrupted by an intron at a codon boundary (as opposed to the middle of a codon) significantly more often than expected. This observation is consistent with the exon shuffling hypothesis, because exons that end at codon boundaries can be concatenated without causing a frame shift and thus are evolutionarily advantageous. On the other hand, when introns interrupt at the middles of codons, they exist in between the first and second bases much more frequently than between the second and third bases, despite the fact that boundaries between the first and second bases of codons are generally far more important than those between the second and third bases. The reason for this is not clear and yet to be explained. We also show that the length of an exon is a multiple of 3 more frequently than expected. Furthermore, the total length of two consecutive exons is also more frequently a multiple of 3. All the observations above are consistent with results recently published by Long, Rosenberg, and Gilbert (1995).      

Metabolome and metaboproteome remodeling in nuclear reprogramming

Nuclear reprogramming resets differentiated tissue to generate induced pluripotent stem (iPS) cells. While genomic attributes underlying reacquisition of the embryonic-like state have been delineated, less is known regarding the metabolic dynamics underscoring induction of pluripotency. Metabolomic profiling of fibroblasts vs. iPS cells demonstrated nuclear reprogramming-associated induction of glycolysis, realized through augmented utilization of glucose and accumulation of lactate. Real-time assessment unmasked downregulated mitochondrial reserve capacity and ATP turnover correlating with pluripotent induction. Reduction in oxygen consumption and acceleration of extracellular acidification rates represent high-throughput markers of the transition from oxidative to glycolytic metabolism, characterizing stemness acquisition. The bioenergetic transition was supported by proteome remodeling, whereby 441 proteins were altered between fibroblasts and derived iPS cells. Systems analysis revealed overrepresented canonical pathways and interactome-associated biological processes predicting differential metabolic behavior in response to reprogramming stimuli, including upregulation of glycolysis, purine, arginine, proline, ribonucleoside and ribonucleotide metabolism, and biopolymer and macromolecular catabolism, with concomitant downregulation of oxidative phosphorylation, phosphate metabolism regulation, and precursor biosynthesis processes, prioritizing the impact of energy metabolism within the hierarchy of nuclear reprogramming. Thus, metabolome and metaboproteome remodeling is integral for induction of pluripotency, expanding on the genetic and epigenetic requirements for cell fate manipulation.     

Geographical variation in food web structure in Nepenthes pitcher plants

Abstract. 1. Relative to Nepenthes species in West Malaysia near the evolutionary centre of the genus, outlying species of Nepenthes in the Seychelles, Sri Lanka and Madagascar have fewer species of both prey and predator living in them, fewer and smaller guilds of species, much apparently empty niche space, less complex food webs, and a greater connectance. The ratios of prey to predators, and of connectance (C₁) to the total number of trophic types present remain approximately constant.
2. Differences between the food webs appear to be related in a complex way to the size of the country and its degree of spatial and temporal isolation, the size of the local species pool capable of colonizing the pitchers, and the number of Nepenthes species present. However, the maximal length of food chains in the richest and most complex food webs is probably limited by energetic constraints or environmental predictability.
3. The data may illustrate how food webs change to become more complex, both by the addition of new guilds of species and the addition of species to existing guilds, while at the same time certain properties of the food web are kept approximately constant.     

The most ancient bark beetle known: a new tribe,genus and species from Lebanese amber (Coleoptera,Curculionidae, Scolytinae)

Abstract Cylindrobrotus pectinatus gen. et sp.n. , a new scolytine species from Cretaceous Lebanese amber, is described. A new tribe, Cylindrobrotini trib.n. , is proposed for this unique species, which demonstrates an unusual combination of some archaic and many advanced characters. This finding suggests that the Scolytinae became a distinct lineage of Curculionoidea from the Lower Cretaceous. Fossil records are reviewed, and some remarks on the origin and taxonomic position of bark and ambrosia beetles are made. Some comments on the various phylogenetic interpretations of the last 30 years are given, particularly in respect of their correspondence with the fossil record. The early appearance of Scolytinae in the fossil record before other Curculionidae (which appeared in the Upper Cretaceous) can be used as evidence against the hypothesis of bark beetles as offspring of weevils. The question of the taxonomic rank of bark beetles (separate subfamily or family) and their placement among other groups of the superfamily remains unsolved.