Development of polymorphic microsatellite markers for the zebra finch (Taeniopygia guttata)

To study the population genetics as well as the mating system of captive zebra finch (Taeniopygia guttata) populations, we developed primers for 12 microsatellite loci and screened them in 529 individuals from two successive generations of a single captive population. All markers were polymorphic with five to 14 alleles per locus. We checked all markers for Mendelian inheritance in 307 offspring whose parents were known for sure. Four markers showed evidence for the presence of null alleles. Once allowing for null alleles, we found no mismatches between offspring and parents, suggesting a very low rate of mutation. Average observed and expected heterozygosities across the eight loci showing no evidence for null‐alleles was 0.819 and 0.812, respectively.     

Biodiversity in microbial communities: system scale patterns and mechanisms

The relationship between anthropogenic impact and the maintenance of biodiversity is a fundamental question in ecology. The emphasis on the organizational level of biodiversity responsible for ecosystem processes is shifting from a species-centred focus to include genotypic diversity. The relationship between biodiversity measures at these two scales remains largely unknown. By stratifying anthropogenic effects between scales of biodiversity of bacterial communities, we show a statistically significant difference in diversity based on taxonomic scale. Communities with intermediate species richness show high genotypic diversity while speciose and species-poor communities do not. We propose that in species-poor communities, generally comprising stable yet harsh conditions, physiological tolerance and competitive trade-offs limit both the number of species that occur and the loss of genotypes due to decreases in already constrained fitness. In species-rich communities, natural environmental conditions result in well-defined community structure and resource partitioning. Disturbance of these communities disrupts niche space, resulting in lower genotypic diversity despite the maintenance of species diversity. Our work provides a model to inform future research about relationships between species and genotypic biodiversity based on determining the biodiversity consequences of changing environmental context.     

Significance of the White Sea as a stopover for Bewick's Swans Cygnus columbianus bewickii in spring

We searched for a major stopover site of Bewick's Swans Cygnus columbianus bewickii in the White Sea following the suggestion that one should exist on the stretch between Estonia and the breeding grounds (1750 km). We discovered 733 Swans in Dvina Bay during a late aerial survey in spring 1993. Subsequently, ground-based research was carried out in May 1994, 1995 and 1996 in the Dry Sea, a tidal, shallow bay with fresh to brackish water just north of the Dvina Delta. The total number of passing Bewick's Swans was estimated at 10974 (1994), 9593 (1995) and 17 972 (1996) (32–60% of the flyway population). Estimated peak numbers staging were 1500–2000 (9 May 1994), 4937 (17 May 1995) and 4457 (24 May 1996) (> 5–16% of the flyway population). The Swans foraged almost exclusively on submerged water plants apart from some supplemental feeding on emerged food plants around high tide. Stoneworts Chara spp. were an important food in the late spring of 1996, because they grew in places where bog streams quickly melted the ice. At this latitude (65̀N) food alternatives to the submerged macrophytes are rare in spring, but we cannot rule out the possibility that the Swans forage on grass rhizomes on inundated pastures. One bird tracked by satellite staged 15 days in Dvina Bay, of which four days were spent in the Dry Sea, in accordance with other indications that the Dry Sea is part of a larger stopover site within Dvina Bay. Recent evidence shows that the Swans largely skip the White Sea during autumn migration. However, in spring the birds probably need this stopover to be able to carry reserves to the breeding grounds. At present, the preservation of the submerged vegetation in Dvina Bay seems to be crucial to the conservation of this Bewick's Swan population.     

Artificial mixing prevents nuisance blooms of the cyanobacterium Microcystis in Lake Nieuwe Meer, the Netherlands

1. Artificial mixing in the hypertrophic Lake Nieuwe Meer was successful in preventing blooms of the cyanobacterium Microcystis. During the 2 years of artificial, deep mixing the number of colonies of Microcystis per litre and also per m² was lower than in the two preceding control years. Hardly any nuisance scums of Microcystis occurred in the lake.
2. The phytoplankton shifted from a cyanobacteria-dominated community in summer to a mixed community of flagellates, green algae and diatoms. Reduced sedimentation losses in the mixed lake, probably in combination with a lower pH, favoured non-buoyant algae, while the entrainment of cyanobacteria in the turbulent flow nullified their advantage of buoyancy.
3. The chlorophyll concentrations were much lower in the mixed lake, but the euphotic depth did not show clear differences between the years. The chlorophyll content integrated through depth (m^–2) increased in the artificially mixed lake.
4. The deep lake normally stratified in summer, but artificial mixing of the lake in 1993 resulted in a homogeneous temperature and oxygen distribution with depth. In spring 1994, the mixing was applied intermittently with a reduction of 75% of the energy costs, while the mixing was still sufficient to prevent stratification.
5. Determination of the buoyancy state of the colonies on a sunny and calm day showed that the buoyancy loss was low close to the bubble plumes, and high at some distance from these plumes. This suggests that Microcystis could escape the mixing at some distance from the plumes, and could synthesize more carbohydrates during its stay in the upper illuminated layer of the lake than the deep mixed colonies close to the bubble plumes. Determination of the buoyancy state appeared to be a good and simple method to investigate the extent of entrainment of colonies in the turbulent flow.     

Pepino mosaic virus: a successful pathogen that rapidly evolved from emerging to endemic in tomato crops

Taxonomy: Pepino mosaic virus (PepMV) belongs to the Potexvirus genus of the Flexiviridae family. Physical properties: PepMV virions are nonenveloped flexuous rods that contain a monopartite, positive‐sense, single‐stranded RNA genome of 6.4 kb with a 3′ poly‐A tail. The genome contains five major open reading frames (ORFs) encoding a 164‐kDa RNA‐dependent RNA polymerase (RdRp), three triple gene block proteins of 26, 14 and 9 kDa, and a 25‐kDa coat protein. Genome diversity: Four PepMV genotypes, with an intergenotype RNA sequence identity ranging from 78% to 95%, can be distinguished: the original Peruvian genotype (LP); the European (tomato) genotype (EU); the American genotype US1; and the Chilean genotype CH2. Transmission: PepMV is very efficiently transmitted mechanically, and a low seed transmission rate has been demonstrated. In addition, bumblebees have been associated with viral transmission. Host range: Similar to other Potexviruses, PepMV has a rather narrow host range that is thought to be largely restricted to species of the Solanaceae family. After originally being isolated from pepino (Solanum muricatum), PepMV has been identified in natural infections of the wild tomato species S. chilense, S. chmielewskii, S. parviflorum and S. peruvianum. PepMV is causing significant problems in the cultivation of the glasshouse tomato Solanum lycopersicum, and has been identified in weeds belonging to various plant families in the vicinity of tomato glasshouses. Symptomatology: PepMV symptoms can be very diverse. Fruit marbling is the most typical and economically devastating symptom. In addition, fruit discoloration, open fruit, nettle‐heads, leaf blistering or bubbling, leaf chlorosis and yellow angular leaf spots, leaf mosaic and leaf or stem necrosis have been associated with PepMV. The severity of PepMV symptoms is thought to be dependent on environmental conditions, as well as on the properties of the viral isolate. Minor nucleotide sequence differences between isolates from the same genotype have been shown to lead to enhanced aggressiveness and symptomatology. Control: Prevention of infection through strict hygiene measures is currently the major strategy for the control of PepMV in tomato production. Cross‐protection can be effective, but only under well‐defined and well‐controlled conditions, and the effectiveness depends strongly on the PepMV genotype.     

Association between DRD4 gene polymorphism and personality variation in great tits: a test across four wild populations

Polymorphisms in the dopamine receptor D4 gene (DRD4) have been related to individual variation in novelty‐seeking or exploratory behaviour in a variety of animals, including humans. Recently, the human DRD4 orthologue was sequenced in a wild bird, the great tit (Parus major) and a single nucleotide polymorphism in exon 3 of this gene (SNP830) was shown to be associated with variation in exploratory behaviour of lab‐raised individuals originating from a single wild population. Here we test the generality of this finding in a large sample of free‐living individuals from four European great tit populations, including the originally sampled population. We demonstrate that the association between SNP830 genotype and exploratory behaviour also exists in free‐living birds from the original population. However, in the other three populations we found only limited evidence for an association: in two populations the association appeared absent; while in one there was a nonsignificant tendency. We could not confirm a previously demonstrated interaction with another DRD4 polymorphism, a 15 bp indel in the promoter region (ID15). As yet unknown differences in genetic or environmental background could explain why the same genetic polymorphism (SNP830) has a substantial effect on exploratory behaviour in one population, explaining 4.5–5.8% of the total variance—a large effect for a single gene influencing a complex behavioural trait—but not in three others. The confirmation of an association between SNP830 genotype and personality‐related behaviour in a wild bird population warrants further research into potential fitness effects of the polymorphism, while also the population differences in the strength of the association deserve further investigation. Another important future challenge is the identification of additional loci influencing avian personality traits in the wild.     

Physiological colour change in the Moorish gecko,Tarentola mauritanica (Squamata: Gekkonidae): effects of background,light, and temperature

Colour has many different functions in animals, such as an involvement in thermoregulation, crypsis, and social interactions. Species capable of physiological colour change may alter their coloration in response to ecological conditions. The Moorish gecko, Tarentola mauritanica, is capable of actively changing its body coloration. In the present study, we investigated colour change in this gecko as a function of background, temperature, and light. Our results demonstrate that the Moorish gecko indeed changes its dorsal colour in response to changes in environmental conditions. By contrast to several other reptilian species, this rapid colour change does not appear to be associated with thermoregulation. Background matching, however, did appear to be a prominent function, although illumination appears to be an essential trigger. Future research should concentrate on individual variation and its effectiveness with respect to antipredatory mechanisms. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, ?? , ??–??.     

EFFECT OF SUBLETHAL DOSES OF CADMIUM, INORGANIC MERCURY AND METHYLMERCURY ON THE CELL MORPHOLOGY OF AN INSECT CELL LINE (AEDES ALBOPICTUS, C6/36)

The effect of CdCl₂(44 μ ), HgCl₂(3.7 μ ), and MeHgCl (2 μ ) on the morphology ofAedes albopictusC6/36 cells was studied at the light microscopical level. Treatment times and metal concentrations were in the sublethal range as determined by a fluorometric dye exclusion test. The three metal species had profound effects on the cell morphology. MeHgCl treatment induced the development of a large number of short, actin-supported, tangled filopodia. Both CdCl₂and HgCl₂induced long extensions. Pretreatment with colchicine but not with cyto-chalasin B prevented formation of these extensions which suggests that they were supported by microtubules. This was confirmed by immunostaining for microtubules. The extensions were relatively stable towards colchicine post-treatment. To authors’ knowledge, this effect has not yet been described for heavy metals. The similarity with 20-hydroxyecdysone-treated cells and the occurrence of cytoplasmic feet in insect cells is discussed.