Mechanical strength of the cement-bone interface is greater in shear than in tension.

The objective of this study was to determine the relative mechanical properties of the cement-bone interface due to tensile or shear loading. Mechanical tests were performed on cement-bone specimens in tensile (n = 51) or shear (n = 55) test jigs under the displacement control at 1 mm/min until complete failure. Before testing, the quantity of bone interdigitated with the cement was determined and served as a covariate in the study. The apparent strength of the cement-bone interface was significantly higher (p < 0.0001) for the interface when loaded in shear (2.25 MPa) when compared to tensile loading (1.35 MPa). Significantly higher energies to failure (p < 0.0001) and displacement before failure (p < 0.01) were also determined for the shear specimens. The post-yield softening response was not different for the two test directions. The data obtained herein suggests that cement-bone interfaces with equal amounts of tensile and shear stress would be more likely to fail under tensile loading.     

Evolution of the Schlafen genes,a gene family associated with embryonic lethality,meiotic drive,immune processes and orthopoxvirus virulence

Genes of the Schlafen family, first discovered in mouse, are expressed in hematopoietic cells and are involved in immune processes. Previous results showed that they are candidate genes for two major phenomena: meiotic drive and embryonic lethality (DDK syndrome). However, these genes remain poorly understood, mostly due to the limitations imposed by their similarity, close location and the potential functional redundancy of the gene family members.     

An operational method to assess impacts of land clearing on terrestrial biodiversity

We developed a methodology to objectively and transparently assess the impacts on terrestrial biodiversity of proposals to clear native vegetation in New South Wales (NSW), Australia. The methodology was developed to underpin a policy to permit land clearing only where it ‘improves or maintains environmental outcomes’. It was developed in the following steps: (1) operational requirements and resource constraints were defined. (2) Biodiversity surrogates and assessment techniques that matched these requirements and constraints were identified. (3) Sites were assessed locally, but also in the broader landscape, regional and national contexts. (4) Explicit rules and metrics were developed to facilitate transparent and consistent assessments. (5) These rules, metrics and the data that underpinned them were codified into a simple computer software tool. The tool did not permit clearing in vegetation communities or landscapes that were already over-cleared or listed as threatened, unless the vegetation was in ‘low condition’ (unlikely to persist in the long-term). Other native vegetation could be cleared if regional, landscape and site impacts could be offset. In the first year after the assessment methodology was implemented a net area of approximately 187 ha of native vegetation was approved for clearing with offsets. Most approvals (68%) were for proposals to clear native vegetation with a low likelihood of persistence under the existing land use (predominantly scattered trees among cultivation) and offset these impacts by improving the condition and likelihood of persistence of native vegetation in comparable ecosystems. Remaining approvals were for clearing relatively small areas (mean = 0.6 ha) of partially modified native vegetation. Proposals to offset the impacts of clearing substantially intact native vegetation or larger areas of partially modified native vegetation were generally assessed as unlikely to ‘improve or maintain environmental outcomes’.     

Aptamer-based multiplexed proteomic technology for biomarker discovery

Background

The interrogation of proteomes (“proteomics”) in a highly multiplexed and efficient manner remains a coveted and challenging goal in biology and medicine.

Methodology/Principal Findings

We present a new aptamer-based proteomic technology for biomarker discovery capable of simultaneously measuring thousands of proteins from small sample volumes (15 µL of serum or plasma). Our current assay measures 813 proteins with low limits of detection (1 pM median), 7 logs of overall dynamic range (∼100 fM–1 µM), and 5% median coefficient of variation. This technology is enabled by a new generation of aptamers that contain chemically modified nucleotides, which greatly expand the physicochemical diversity of the large randomized nucleic acid libraries from which the aptamers are selected. Proteins in complex matrices such as plasma are measured with a process that transforms a signature of protein concentrations into a corresponding signature of DNA aptamer concentrations, which is quantified on a DNA microarray. Our assay takes advantage of the dual nature of aptamers as both folded protein-binding entities with defined shapes and unique nucleotide sequences recognizable by specific hybridization probes. To demonstrate the utility of our proteomics biomarker discovery technology, we applied it to a clinical study of chronic kidney disease (CKD). We identified two well known CKD biomarkers as well as an additional 58 potential CKD biomarkers. These results demonstrate the potential utility of our technology to rapidly discover unique protein signatures characteristic of various disease states.

Conclusions/Significance

We describe a versatile and powerful tool that allows large-scale comparison of proteome profiles among discrete populations. This unbiased and highly multiplexed search engine will enable the discovery of novel biomarkers in a manner that is unencumbered by our incomplete knowledge of biology, thereby helping to advance the next generation of evidence-based medicine.     

Seed dormancy release and germination characteristics of <i>Corispermum lehmannianum</i> Bunge,an endemic species in the Gurbantunggut desert of China

Seed dormancy release and germination of Corispermum lehmannianum Bunge were tested using various treatments: temperature, cold stratification, gibberelins (GA3), dry storage and sand burial. Results showed that temperature and light did not affect the germination of fresh seeds, cold stratification and GA3 could improve seed germination, whereas dry storage and sand burial did not. The germination percentage was highest at 35/20 °C after the cold stratification and GA3 treatments. Corispermum lehmannianum seeds were classified as non-deep, Type-2, physiological dormancy (PD), whose seed dormancy could be released by cold stratification and GA3.