Relationship between Tumor Cell Invasiveness and Polyploidization

A number of studies have shown that tumor cells fuse with other tumor and non-tumor cells. In the present study on tumor cell lines derived from glioblastoma, breast cancer, and melanoma, we estimated the frequency of fusion between tumor cells by establishing the fraction of cells with whole tumor-genome duplication in each cell line. Together with this, the capacity of the tumor cell lines to spread through a basement membrane scaffold was assessed, in order to test the hypothesis that pericellular proteolysis by enzymatic release in the spaces of intercellular contact could account for differences in the fusogenicity of tumor cells. The difference in invasiveness between the cell lines accounted for their specific amount of cells with tumor-genome duplication, which, depending on the cell line analyzed, ranged from 2% to 25% of the total cells. These results support the hypothesis that cell-to-cell invasion eliciting membrane fusion causes polyploidization in tumor cells.     

The flies of Icarus: science with wings in Crete

Around 100 researchers gathered at the eighteenth EMBO Conference on ‘The Molecular and Developmental Biology of Drosophila’, which took place in Crete in June 2012. Whether deconstructing or integrating at the genetic, cellular or organ level, the talks highlighted the synergy of combining methods, approaches and disciplines in this increasingly versatile model system.     

Relationship between salt tolerance and photosynthetic machinery performance in citrus

In citrus, salt stress has been related to the build up of chloride ions in plant tissues that affect photosynthesis, growth and yield. We investigated the effects of salt stress on the stability of the photosynthetic machinery with respect to the relative salt tolerance of different citrus genotypes including: Swingle Citrumelo, Carrizo citrange, C35 citrange, Cleopatra mandarin and Forner-Alcaide #5. Under identical salt-stress conditions, Forner-Alcaide #5 and Cleopatra mandarin accumulated less chloride ions in leaves than the other genotypes and showed a better plant performance. Chlorophyll fluorescence parameters indicated severe impairments of photosynthetic activity in salt-sensitive Citrumelo and citranges but Cleopatra and Forner-Alcaide #5 were less affected. In addition, differences in photosynthetic responses between these two moderately tolerant genotypes suggested different strategies to cope with salinity. The high tolerance to salinity shown by Forner-Alcaide #5 can be associated to the ability of keeping an active photosynthetic system at elevated saline conditions whereas the tolerance of Cleopatra was linked to rapid reductions of net photosynthetic rate, stomatal conductance, performance of PSII and photosynthetic efficiency.     

Flexible nonlinear blind signal separation in the complex domain

This paper introduces an Independent Component Analysis (ICA) approach to the separation of nonlinear mixtures in the complex domain. Source separation is performed by a complex INFOMAX approach. The neural network which realizes the separation employs the so called "Mirror Model" and is based on adaptive activation functions, whose shape is properly modified during learning. Nonlinear functions involved in the processing of complex signals are realized by pairs of spline neurons called "splitting functions", working on the real and the imaginary part of the signal respectively. Theoretical proof of existence and uniqueness of the solution under proper assumptions is also provided. In particular a simple adaptation algorithm is derived and some experimental results that demonstrate the effectiveness of the proposed solution are shown.     

Lutein epoxide cycle, light harvesting and photoprotection in species of the tropical tree genus Inga

Dynamics and possible function of the lutein epoxide (Lx) cycle, that is, the reversible conversion of Lx to lutein (L) in the light-harvesting antennae, were investigated in leaves of tropical tree species. Photosynthetic pigments were quantified in nine Inga species and species from three other genera. In Inga , Lx levels were high in shade leaves (mostly above 20 mmol mol⁻¹ chlorophyll) and low in sun leaves. In Virola surinamensis , both sun and shade leaves exhibited very high Lx contents (about 60 mmol mol⁻¹ chlorophyll). In Inga marginata grown under high irradiance, Lx slowly accumulated within several days upon transfer to deep shade. When shade leaves of I. marginata were briefly exposed to the sunlight, both violaxanthin and Lx were quickly de-epoxidized. Subsequently, overnight recovery occurred only for violaxanthin, not for Lx. In such leaves, containing reduced levels of Lx and increased levels of L, chlorophyll fluorescence induction showed significantly slower reduction of the photosystem II electron acceptor, Q _A, and faster formation as well as a higher level of non-photochemical quenching. The results indicate that slow Lx accumulation in Inga leaves may improve light harvesting under limiting light, while quick de-epoxidation of Lx to L in response to excess light may enhance photoprotection.     

Growth of cancer cell lines under stem cell-like conditions has the potential to unveil therapeutic targets

Malignant tumors comprise a small proportion of cancer-initiating cells (CIC), capable of sustaining tumor formation and growth. CIC are the main potential target for anticancer therapy. However, the identification of molecular therapeutic targets in CIC isolated from primary tumors is an extremely difficult task. Here, we show that after years of passaging under differentiating conditions, glioblastoma, mammary carcinoma, and melanoma cell lines contained a fraction of cells capable of forming spheroids upon in vitro growth under stem cell-like conditions. We found an increased expression of surface markers associated with the stem cell phenotype and of oncogenes in cell lines and clones cultured as spheroids vs. adherent cultures. Also, spheroid-forming cells displayed increased tumorigenicity and an altered pattern of chemosensitivity. Interestingly, also from single retrovirally marked clones, it was possible to isolate cells able to grow as spheroids and associated with increased tumorigenicity. Our findings indicate that short-term selection and propagation of CIC as spheroid cultures from established cancer cell lines, coupled with gene expression profiling, represents a suitable tool to study and therapeutically target CIC: the notion of which genes have been down-regulated during growth under differentiating conditions will help find CIC-associated therapeutic targets.     

Ammonia-oxidizing bacteria on root biofilms and their possible contribution to N use efficiency of different rice cultivars

Ammonia-oxidizing bacteria (AOB) populations were studied on the root surface of different rice cultivars by PCR coupled with denaturing gradient gel electrophoresis (DGGE) and fluorescence in situ hybridization (FISH). PCR-DGGE of the ammonium monooxygenase gene (amoA) showed a generally greater diversity on root samples compared to rhizosphere and unplanted soil. Sequences affiliated with Nitrosomonas spp. tended to be associated with modern rice hybrid lines. Root-associated AOB observed by FISH were found within a discrete biofilm coating the root surface. Although the total abundance of AOB on root biofilms of different rice cultivars did not differ significantly, there were marked contrasts in their population structure, indicating selection of Nitrosomonas spp. on roots of a hybrid cultivar. Observations by FISH on the total bacterial community also suggested that different rice cultivars support different bacterial populations even under identical environmental conditions. The presence of active AOB in the root environment predicts that a significant proportion of the N taken up by certain rice cultivars is in the form of NO₃ ^–-N produced by the AOB. Measurement of plant growth of hydroponically grown plants showed a stronger response of hybrid cultivars to the co-provision of NH₄ ⁺ and NO₃ ^–. In soil-grown plants, N use efficiency in the hybrid was improved during ammonium fertilization compared to nitrate fertilization. Since ammonium-fertilized plants actually receive a mixture of NH₄ ⁺ and NO₃ ^– with ratios depending on root-associated nitrification activity, these results support the advantage of co-provision of ammonium and nitrate for the hybrid cultivar.