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991.
Manuel Nieto-Domínguez Laura I. de Eugenio Jorge Barriuso Alicia Prieto Beatriz Fernández de Toro ángeles Canales-Mayordomo María Jesús Martínez 《Applied and environmental microbiology》2015,81(18):6380-6392
This paper reports on a novel β-xylosidase from the hemicellulolytic fungus Talaromyces amestolkiae. The expression of this enzyme, called BxTW1, could be induced by beechwood xylan and was purified as a glycoprotein from culture supernatants. We characterized the gene encoding this enzyme as an intronless gene belonging to the glycoside hydrolase gene family 3 (GH3). BxTW1 exhibited transxylosylation activity in a regioselective way. This feature would allow the synthesis of oligosaccharides or other compounds not available from natural sources, such as alkyl glycosides displaying antimicrobial or surfactant properties. Regioselective transxylosylation, an uncommon combination, makes the synthesis reproducible, which is desirable for its potential industrial application. BxTW1 showed high pH stability and Cu2+ tolerance. The enzyme displayed a pI of 7.6, a molecular mass around 200 kDa in its active dimeric form, and Km and Vmax values of 0.17 mM and 52.0 U/mg, respectively, using commercial p-nitrophenyl-β-d-xylopyranoside as the substrate. The catalytic efficiencies for the hydrolysis of xylooligosaccharides were remarkably high, making it suitable for different applications in food and bioenergy industries. 相似文献
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994.
Loss of MT1‐MMP causes cell senescence and nuclear defects which can be reversed by retinoic acid
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Ana Gutiérrez‐Fernández Clara Soria‐Valles Fernando G Osorio Jesús Gutiérrez‐Abril Cecilia Garabaya Alina Aguirre Antonio Fueyo María Soledad Fernández‐García Xose S Puente Carlos López‐Otín 《The EMBO journal》2015,34(14):1875-1888
MT1-MMP (MMP14) is a collagenolytic enzyme located at the cell surface and implicated in extracellular matrix (ECM) remodeling. Mmp14−/− mice present dwarfism, bone abnormalities, and premature death. We demonstrate herein that the loss of MT1-MMP also causes cardiac defects and severe metabolic changes, and alters the cytoskeleton and the nuclear lamina structure. Moreover, the absence of MT1-MMP induces a senescent phenotype characterized by up-regulation of p16INK4a and p21CIP1/WAF1, increased activity of senescence-associated β-galactosidase, generation of a senescence-associated secretory phenotype, and somatotroph axis alterations. Consistent with the role of retinoic acid signaling in nuclear lamina stabilization, treatment of Mmp14−/− mice with all-trans retinoic acid reversed the nuclear lamina alterations, partially rescued the cell senescence phenotypes, ameliorated the pathological defects in bone, skin, and heart, and extended their life span. These results demonstrate that nuclear architecture and cell senescence can be modulated by a membrane protease, in a process involving the ECM as a key regulator of nuclear stiffness under cell stress conditions. 相似文献
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Michal Meir Yaron Galanty Lior Kashani Michael Blank Rami Khosravi María Jesús Fernández-ávila Andrés Cruz-García Ayelet Star Lea Shochot Yann Thomas Lisa J. Garrett Daniel A. Chamovitz David M. Bodine Thimo Kurz Pablo Huertas Yael Ziv Yosef Shiloh 《Nucleic acids research》2015,43(9):4517-4530
The DNA damage response is vigorously activated by DNA double-strand breaks (DSBs). The chief mobilizer of the DSB response is the ATM protein kinase. We discovered that the COP9 signalosome (CSN) is a crucial player in the DSB response and an ATM target. CSN is a protein complex that regulates the activity of cullin ring ubiquitin ligase (CRL) complexes by removing the ubiquitin-like protein, NEDD8, from their cullin scaffold. We find that the CSN is physically recruited to DSB sites in a neddylation-dependent manner, and is required for timely repair of DSBs, affecting the balance between the two major DSB repair pathways—nonhomologous end-joining and homologous recombination repair (HRR). The CSN is essential for the processivity of deep end-resection—the initial step in HRR. Cullin 4a (CUL4A) is recruited to DSB sites in a CSN- and neddylation-dependent manner, suggesting that CSN partners with CRL4 in this pathway. Furthermore, we found that ATM-mediated phosphorylation of CSN subunit 3 on S410 is critical for proper DSB repair, and that loss of this phosphorylation site alone is sufficient to cause a DDR deficiency phenotype in the mouse. This novel branch of the DSB response thus significantly affects genome stability. 相似文献
997.
Variation in behavioral responses of the South American sea lion to tourism disturbance: Implications for tourism management
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Guido Pavez Lily Muñoz Fernanda Barilari Maritza Sepúlveda 《Marine Mammal Science》2015,31(2):427-439
Due to the highly predictable patterns of occupancy on land, pinnipeds are one of the main marine resources observed by tourists, which, in turn, could strongly perturb their behavior. We analyzed the behavioral responses of the South American sea lion (Otaria byronia) to the presence of tourists and its variation according to temporal (2012 vs. 2013 austral summer months), spatial (breeding vs. nonbreeding sites of the colony), and age/sex class (adult males vs. subadult males vs. females) factors, and determined the relationship between the degree of responses by sea lions and the distance of the vessel to the colony, visitation time, and tourist behavior. We recorded 1,232 boat visits during 2012 and 2013. Subadult males were the age/sex class most affected in the breeding site, followed by adult females at the nonbreeding site. More disturbing conduct by tourists, longer visitation time, and vessels closer to the colony caused greater responses by sea lions. The established minimum distance from the colony is not enforced, generating an adverse response by sea lions. We recommend the development of management plans with the local coastal communities to decrease the impact of ecotourism on the species and enhance the sustainability of this industry. 相似文献
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999.
Mario Alberto Martínez‐Núñez Katya Rodríguez‐Vázquez Ernesto Pérez‐Rueda 《Proteins》2015,83(9):1625-1631
The metabolism of microbial organisms and its diversity are partly the result of an adaptation process to the characteristics of the environments that they inhabit. In this work, we analyze the influence of lifestyle on the content of promiscuous enzymes in 761 nonredundant bacterial and archaeal genomes. Promiscuous enzymes were defined as those proteins whose catalytic activities are defined by two or more different Enzyme Commission (E.C.) numbers. The genomes analyzed were categorized into four lifestyles for their exhaustive comparisons: free‐living, extremophiles, pathogens, and intracellular. From these analyses we found that free‐living organisms have larger genomes and an enrichment of promiscuous enzymes. In contrast, intracellular organisms showed smaller genomes and the lesser proportion of promiscuous enzymes. On the basis of our data, we show that the proportion of promiscuous enzymes in an organism is mainly influenced by the lifestyle, where fluctuating environments promote its emergence. Finally, we evidenced that duplication processes occur preferentially in metabolism of free‐living and extremophiles species. Proteins 2015; 83:1625–1631. © 2015 Wiley Periodicals, Inc. 相似文献
1000.