Decreased Liver Fatty Acid Δ‐6 and Δ‐5 Desaturase Activity in Obese Patients

Steatosis in obese nonalcoholic fatty liver disease (NAFLD) patients is a clinicopathological condition associated with depletion of n‐3 polyunsaturated fatty acids (PUFA), a feature that may be related to PUFA desaturation. Liver Δ‐6 and Δ‐5 desaturase (Δ‐6D and Δ‐5D) activities, homeostasis model assessment of insulin resistance (HOMA_IR), and ferric reducing ability of plasma (FRAP) were evaluated in 13 obese patients who underwent subtotal gastrectomy with gastro‐jejunal anastomosis in Roux‐en‐Y and 15 nonobese patients who underwent laparoscopic cholecystectomy (controls). Liver Δ‐6D and Δ‐5D activities in obese patients were 87% and 66% lower than controls (P < 0.001), respectively, with a 62% diminution in the Δ‐6D/Δ‐5D activity ratio (P < 0.02). Δ‐6D inversely correlated with both HOMA_IR (r = ?0.70, P < 0.0001) and oxidative stress assessed as the reciprocal value of FRAP (r = ?0.40, P < 0.05). Δ‐5D negatively correlated with HOMA_IR (r = ?0.48, P < 0.01) but not with FRAP^?1 (r = ?0.13, not significant). In conclusion, liver PUFA desaturation is diminished in obese NAFLD patients, in association with underlying insulin resistance and oxidative stress, which may play a role in altering lipid metabolism favoring fatty infiltration.     

A controlled water-table depth system to study the influence of fine-scale differences in water regime for plant growth

A method was developed to maintain water-table depths at a constant level in outdoor mesocosms. The system included a water treatment reservoir, where tap water was microbially deoxygenated and denitrified; an adjustable-level control chamber that set desired water-table depths and plant growing mesocosms.The soil water status was evaluated by constant monitoring using tensiometers, pressure transducers and dipwells. The robustness of the system was tested by inducing sudden incidents of flooding and drainage. The system was able to revert to the original set water-table depths within 5 and 10 min, respectively. It also reliably sustained consistent water-table depths throughout the growing season without the need for maintenance.As an example, the method was used to grow plants at five set water-table depths: 50, 150, 250, 350, and 450 mm below ground surface. Two wet grassland species Festuca pratensis (meadow fescue), and Carex nigra (common sedge) were grown and dry biomass production recorded. Results showed differences in growth response between the two species to subjected water-table depths. In monoculture, F. pratensis production followed the order 50 = 150 = 350 > 250 = 450 mm (p < 0.001), while for C. nigra it was 150 = 250 > 50 = 350 = 450 mm (p < 0.001). In mixture, F. pratensis did not show a significant trend (p < 0.06), whereas C. nigra showed 50 = 150 > 250 > 350 = 450 mm (p < 0.001).The ease of the system to establish constant and/or dynamic water-table depths and its reliability outdoors renders it useful for a wide variety of studies involving plant growth.     

House Wrens Troglodytes aedon reduce repertoire size and change song element frequencies in response to anthropogenic noise

Anthropogenic noise (≤ 3 kHz) can affect key features of birds’ acoustic communication via two different processes: (1) song‐learning, because songbirds need to hear themselves and other birds to crystallize their song, and (2) avoidance of song elements that overlap with anthropogenic noise. In this study we tested whether anthropogenic noise reduces the number of song elements in the repertoire of House Wren Troglodytes aedon, an urban species. Additionally, we tested whether the proportion of high‐frequency elements (i.e. elements where the minimum frequency is above 3 kHz) is related to anthropogenic noise levels, and how the frequencies and duration of shared elements between males change with different levels of anthropogenic noise. We recorded 29 House Wren males exposed to different anthropogenic noise levels (36.50–79.50 dB) during two consecutive breeding seasons from four locations. We recorded each male on 2 days during each season continuously for 50 min (we collected 104 h of recordings) and measured anthropogenic noise levels every 10 min inside each male territory during the recording period. In general, individuals inhabiting noisier territories had smaller repertoires. However, only in two locations with anthropogenic noise levels between 38.60 and 79.50 dB did males inhabiting noisier territories have smaller repertoires. In the other two locations with lower anthropogenic noise (36.50–66.50 dB), the anthropogenic noise inside each territory was not related to the repertoire size. Individuals inhabiting the noisiest location showed a tendency to include more high‐frequency elements in their songs. In 26% of the elements, the anthropogenic noise affected their frequency features. Our results showed that not all House Wrens inhabiting urban environments modify their songs at the highest level of organization (i.e. repertoire) to reduce the masking effect of anthropogenic noise on acoustic communication.     

Replication-Independent Endogenous DNA Double-Strand Breaks in Saccharomyces cerevisiae Model

Without exposure to any DNA-damaging agents, non-dividing eukaryotic cells carry endogenous DNA double-strand breaks (EDSBs), or Replication-Independent (RIND)-EDSBs. In human cells, RIND-EDSBs are enriched in the methylated heterochromatic areas of the genome and are repaired by an ATM-dependent non-homologous end-joining pathway (NHEJ). Here, we showed that Saccharomyces cerevisiae similarly possess RIND-EDSBs. Various levels of EDSBs were detected during different phases of the cell cycle, including G0. Using a collection of mutant yeast strains, we investigated various DNA metabolic and DNA repair pathways that might be involved in the maintenance of RIND-EDSB levels. We found that the RIND-EDSB levels increased significantly in yeast strains lacking proteins involved in NHEJ DNA repair and in suppression of heterochromatin formation. RIND-EDSB levels were also upregulated when genes encoding histone deacetylase, endonucleases, topoisomerase, and DNA repair regulators were deleted. In contrast, RIND-EDSB levels were downregulated in the mutants that lack chromatin-condensing proteins, such as the high-mobility group box proteins, and Sir2. Likewise, RIND-EDSB levels were also decreased in human cells lacking HMGB1. Therefore, we conclude that the genomic levels of RIND-EDSBs are evolutionally conserved, dynamically regulated, and may be influenced by genome topology, chromatin structure, and the efficiency of DNA repair systems.     

Depression Symptom Trajectories and Associated Risk Factors among Adolescents in Chile

Adolescence is a key period for studying the development of depression, with studies in Europe and North America showing a pattern of elevated risk that begins in early adolescence and continues to increase as adolescents age. Few studies have examined the course of adolescent depression and associated risk factors in low and middle-income countries. This longitudinal cohort study examined depression symptom trajectories and risk factors in a sample of socio-economically disadvantaged adolescents in Chile (n = 2,508). Data were collected over an 18-month period as part of a clinical trial for secondary students aged 12 to 18 (median age 14). Clinical levels of depression were prevalent in this sample at baseline (35% for girls and 28% for boys); yet latent growth models of symptom trajectories revealed a pattern of decreasing symptoms over time. There was evidence of an anxiety-depression developmental pathway for girls, with elevated anxiety levels initially predicting poorer depression outcomes later on. Poor problem-solving skills were associated with initial depression levels but did not predict the course of depressive symptoms. Critically, the declining symptom trajectories raise important methodological issues regarding the effects of repeated assessment in longitudinal studies.     

The role of doublesex in the evolution of exaggerated horns in the Japanese rhinoceros beetle

Male‐specific exaggerated horns are an evolutionary novelty and have diverged rapidly via intrasexual selection. Here, we investigated the function of the conserved sex‐determination gene doublesex (dsx) in the Japanese rhinoceros beetle (Trypoxylus dichotomus) using RNA interference (RNAi). Our results show that the sex‐specific T. dichotomus dsx isoforms have an antagonistic function for head horn formation and only the male isoform has a role for thoracic horn formation. These results indicate that the novel sex‐specific regulation of dsx during horn morphogenesis might have been the key evolutionary developmental event at the transition from sexually monomorphic to sexually dimorphic horns.     

Molecular Characterization of Invasive Neisseria meningitidis Strains Isolated in Chile during 2010–2011

Background

With the upcoming licensure of Outer Membrane Protein-based vaccines against meningococcal disease, data on disease incidence and molecular characteristic of circulating N. meningitidis strains in Latin American countries is needed. Chile is, to date, one of the few countries in the region that has performed this type of work in a comprehensive collection of disease-associated strains from two consecutive years, 2010–2011.

Methods

A total of 119 N. meningitidis strains isolated from patients with invasive disease in Chile in 2010–2011 were characterized by the National Reference Laboratory. Serogroup determination, MLST and porA typing were performed.

Results

Serogroup B was predominant in both study years, but W135 experienced a noticeable increase in 2011 compared to 2010. ST-11 complex, ST-41/44 complex ST-32 complex were the most prevalent among the isolates, and were strongly associated with serogroups W135 (ST-11 Complex) and B (ST-41/44 and ST-32 complexes). Likewise, the major porA types detected were strongly associated with these three clonal complexes: P1.5,2 was found exclusively among W135:ST-11 isolates, whereas P1.7, 2–3 was only detected in C:ST-11. ST-41/44 isolates mainly had P1.10-8, and ST-32 complex were associated with a P1.18-8 porA.

Conclusions

Our data show disease-associated N. meningitidis circulating in Chile are similar to those found in other parts of the world. The increase on W135:ST-11 isolates observed in 2011 foretold the unusual epidemiological situation experienced in the country in 2012, and MLST data show that this strain is indistinguishable from the one linked to the global Hajj 2000-related outbreak that occurred in 2001. Finally, this work demonstrates the importance of maintaining a strong national surveillance program integrating clinical, epidemiological and laboratory data and incorporating gold standard diagnostic and characterization techniques that allow the data to be compared all over the world.     

Advantage of higher-avidity CTL specific for Tax against human T-lymphotropic virus-1 infected cells and tumors

Strong CTL response can be observed and associated with the control of proviral load in human T-lymphotropic virus type 1 (HTLV-1) infection. However, there are few details with regard to how HTLV-1 specific CTLs work against HTLV-1 infected cells and adult T-cell leukemia cells (ATLs). In this study, using Tax-specific CTL lines with high- and low-functional avidity developed from HLA-A2-transgenic mice, we showed that higher avidity CTLs specific for Tax expressing larger numbers of TCRs and better binding strength to the antigen-HLA-A2 complex are much more efficient at eliminating HTLV-1 infected cells and, in particular, ATL tumor cells with the ability of recognizing a latent level of Tax product detected only with a real-time PCR. These findings suggest that such higher avidity CTLs specific for Tax in HTLV-1 could be responsible for preventing the development of HTLV-1 infection by detecting trace amount of antigens.