Perception in attention deficit hyperactivity disorder

A large body of research demonstrated that individuals with attention deficit hyperactivity disorder (ADHD) suffer from various neuropsychological deficits. In contrast, less is known and only divergent evidence exists on perceptual functions of individuals with ADHD. This is problematic as neuropsychological and perceptual functions are closely interrelated and are often difficult to disentangle in behavioral assessments. This study presents the conduct and results of a systematic literature review on perceptual functions in children and adults with ADHD. This review considers studies using psychophysical methods (objective measurements) and self- and informant reports (subjective measurements). Results indicate that individuals with ADHD have altered perceptual functions in various domains as compared to typically developing individuals. Increased perceptual functions in individuals with ADHD were found with regard to olfactory detection thresholds, whereas reduced perceptual functions were evident for aspects of visual and speech perception. Moreover, individuals with ADHD were found to experience discomfort to sensory stimuli at a lower level than typically developing individuals. Alterations of perceptual functions in individuals with ADHD were shown to be moderated by various factors, such as pharmacological treatment, cognitive functions, and symptom severity. We conclude by giving implications for daily life functioning and clinical practice.     

Chemical speciation of some heavy metals and human health risk assessment in soil around two municipal dumpsites in Sagamu,Ogun state,Nigeria

Environmental and health risk posed by heavy metals from municipal landfill cannot be over emphasized. However, the toxicity and fate of metal in the soil is dependent on its chemical form and therefore quantification of the different forms of metal is more meaningful than the estimation of its total concentration. This study investigated the chemical form and potential hazards of heavy metal pollution at two municipal landfills in Sagamu, Ogun state, Nigeria. Soil samples were collected around the landfills and chemical form of Cu, Zn, Cd, Pb, and Fe were studied, using the Tessier Five-step sequential chemical extraction procedure. The results showed that Cu and Fe were speciated into residual fractions with averages of 23.9 and 31.3% respectively, while Cd and Zn were associated with Carbonate fractions with respective averages of 20.3 and 20.6%. The order of mobility and bioavailability of these metals are: Cd > Pb > Cu > Zn > Fe. A comparison of the result of total extractible metals with standard set by USEPA reveals that Cd and Cu level in the dumpsite soils are far above the critical permissible limit of 3.0 and 250 mg kg^?1, respectively which potent a health risk. Assessment of soil pollution level using geoaccumulation index (I_geo) revealed that the landfill was extremely polluted by Cd (I_geo > 5). Pearson correlation and principal component analysis showed that there were no significant correlations (p < 0.05) among all the metals, suggesting that they are all from different anthropogenic sources. The cancer risk ranged from 1.36E?01 to 2.18E?04 and 5.82E?01 to 9.35E?04 for Children and Adult respectively. The level of cancer risk falls above the threshold values (10^?4–10^?6) which US Environmental Protection Agency considered as unacceptable risk. Based on the above findings, it was suggested that environmental management policy should be implemented to decrease the environmental risks.     

Female reproductive success in gynodioecious Thymus vulgaris: pollen versus nutrient limitation and pollinator foraging behaviour

Gynodioecy is a dimorphic breeding system in which female individuals coexist with hermaphroditic individuals in the same population. Females only contribute to the next generation via ovules, and many studies have shown that they are usually less attractive than hermaphrodites to pollinators. Several mechanisms have been proposed to explain how females manage to persist in populations despite these disadvantages. The ‘resource reallocation hypothesis’ (RRH) states that females channel resources not invested in pollen production and floral advertisement towards the production of more and/or larger seeds. We investigated pollination patterns and tested the RRH in a population of Thymus vulgaris. We measured flower display, flower size, nectar production, visitation rates, pollinator constancy and flower lifespan in the two morphs. In addition, we measured experimentally the effects of pollen and resource addition on female reproductive success (fruit set, seed set, seed weight) of the two morphs. Despite lower investment in floral advertisement, female individuals were no less attractive to pollinators than hermaphrodites on a per flower basis. Other measures of pollinator behaviour (number of flowers visited per plant, morph preference and morph constancy) also showed that pollinators did not discriminate against female flowers. In addition, stigma receptivity was longer in female flowers. Accordingly, and contrary to most studies on gynodioecious species, reproductive success of females was not pollen limited. Instead, seed production was pollen limited in hermaphrodites, suggesting low levels of cross‐pollination in hermaphrodites. Seed production was resource limited in hermaphrodites, but not in females, thus providing support for the RRH. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175 , 395–408.     

Is slowness a learning principle of the visual cortex?

Slow feature analysis is an algorithm for extracting slowly varying features from a quickly varying signal. It has been shown in network simulations on one-dimensional stimuli that visual invariances to shift and other transformations can be learned in an unsupervised fashion based on slow feature analysis. More recently, we have shown that slow feature analysis applied to image sequences generated from natural images using a range of spatial transformations results in units that share many properties with complex and hypercomplex cells of the primary visual cortex. We find cells responsive to Gabor stimuli with phase invariance, sharpened or widened orientation or frequency tuning, secondary response lobes, end-stopping, and cells selective for direction of motion. These results indicate that slowness may be an important principle of self-organization in the visual cortex.     

Structure and Function of CinD (YtjD) of Lactococcus lactis,a Copper-Induced Nitroreductase Involved in Defense against Oxidative Stress

In Lactococcus lactis IL1403, 14 genes are under the control of the copper-inducible CopR repressor. This so-called CopR regulon encompasses the CopR regulator, two putative CPx-type copper ATPases, a copper chaperone, and 10 additional genes of unknown function. We addressed here the function of one of these genes, ytjD, which we renamed cinD (copper-induced nitroreductase). Copper, cadmium, and silver induced cinD in vivo, as shown by real-time quantitative PCR. A knockout mutant of cinD was more sensitive to oxidative stress exerted by 4-nitroquinoline-N-oxide and copper. Purified CinD is a flavoprotein and reduced 2,6-dichlorophenolindophenol and 4-nitroquinoline-N-oxide with k_cat values of 27 and 11 s⁻¹, respectively, using NADH as a reductant. CinD also exhibited significant catalase activity in vitro. The X-ray structure of CinD was resolved at 1.35 Å and resembles those of other nitroreductases. CinD is thus a nitroreductase which can protect L. lactis against oxidative stress that could be exerted by nitroaromatic compounds and copper.Lactococcus lactis IL1403 is a Gram-positive lactic acid bacterium which is used for the manufacture of food and dairy products but also for an increasing number of biotechnological applications. Given the economical importance of this microorganism, it is often used as a model for molecular studies. Its genome has been sequenced (4), and its proteome has been extensively characterized (11). When applied to industrial processes, this bacterium has to face various stress conditions, such as low pH, high temperature, osmotic shock, and metal stress (44). For instance, in traditional cheese making in Switzerland, L. lactis is exposed to copper released from the copper vats.Copper is an essential micronutrient for both prokaryotes and eukaryotes. The two oxidation states of copper, Cu⁺ and Cu²⁺, allow its participation in many important biological functions. More than 30 enzymes are known to use copper as a cofactor, such as superoxide dismutase (SOD), cytochrome c oxidase, or lysyl oxidase (20). The redox activity of copper can also lead to the generation of free radicals, which cause cellular damage (42, 43). Recently, alternative copper toxicity mechanisms have been demonstrated in bacteria in which copper interferes with the formation of catalytic iron-sulfur clusters (6, 22). Whatever the mechanism of copper toxicity, maintenance of copper homeostasis by controlling the uptake, accumulation, detoxification, and removal of copper is critical for living organisms.Copper homeostasis in L. lactis has not yet been investigated in great detail but appears to resemble the well-characterized copper homeostatic system of Enterococcus hirae (34). L. lactis possesses a copRZA operon, which provides copper resistance. It encodes the CopA copper export ATPase, the CopR copper-inducible repressor, and the CopZ copper chaperone (23). CopR regulates not only the copRZA operon but also an additional 11 genes. This so-called CopR regulon also includes copB, encoding a second putative copper ATPase; lctO, encoding lactate oxidase; and the ydiDE, yahCD-yaiAB, and ytjDBA operons of unknown function. Of all the genes and operons constituting the CopR regulon, the ytjDBA operon was most strongly induced by copper (23). Based on sequence comparison, the first gene of this operon, ytjD, encodes an oxygen-insensitive nitroreductase, which we renamed cinD for copper-induced nitroreductase.Nitroreductases are called oxygen insensitive when they can catalyze the two-electron reduction of nitro compounds in the presence of oxygen. Such enzymes are widespread in nature and are able to reduce a wide range of substrates, such as furazones, nitroaromatic compounds, flavins, and ferricyanide, using NADH or NADPH as the reductant. They are flavoproteins of 22 to 24 kDa and form homodimers with one flavin mononucleotide cofactor per monomer. Although oxygen-insensitive nitroreductases have been extensively studied, their in vivo function remains largely unknown. The closest relative of CinD, which has functionally been studied, is FRP of Vibrio harveyi, with 29% sequence identity to CinD. FRP is not a typical nitroreductase but appears to function as an NADH flavin oxidoreductase which provides reduced flavin to luciferase (19). The next closest relative of CinD, NfsA of Escherichia coli, with 23% sequence identity, exhibits the broad substrate specificity typical of most nitroreductases (48). The structure of this enzyme has been solved at a resolution of 1.7 Å (17). It closely resembles the structures of other enzymes which belong to the oxygen-insensitive nitroreductase family. NfsA has recently been shown to participate in the degradation of 2,4,6-trinitrotoluene (10). This suggests that an important function of nitroreductases could be the metabolism of xenobiotics.We investigated here the structure and function of CinD of L. lactis. CinD was induced by copper, cadmium, and silver and protected L. lactis from oxidative stress exerted by 4-nitroquinoline-N-oxide (NQO). The purified enzyme is a flavoprotein and exhibited nitroreductase activity on NQO and a variety of other substrates, using NADH as the reductant. CinD also possesses catalase activity and is thus able to defend cells against oxidative stress exerted by hydrogen peroxide, xenobiotics, or copper. The three-dimensional structure of CinD was resolved at a 1.35-Å resolution and exhibits a typical nitroreductase structure.     

Oscillatory shear loading of bovine periodontal ligament--a methodological study

This study examined the stress response of bovine periodontal ligament (PDL) under sinusoidal straining. The principle of the test consisted in subjecting transverse tooth, PDL and bone sections of known geometries to controlled oscillatory force application. The samples were secured to the actuator by support plates fabricated using a laser sintering technique to fit their contours to the tooth and the alveolar bone. The actuator was attached to the root slices located in the specimen's center. Hence the machine was able to push or pull the root relative to its surrounding alveolar bone. After determining an optimal distraction amplitude, the samples were cyclically loaded first in ramps and then in sinusoidal oscillations at frequencies ranging from 0.2 to 5 Hz. In the present study the following observations were made: (1) Imaging and the laser sintering technique can be used successfully to fabricate custom-made support plates for cross-sectional root-PDL-bone sections using a laser sintering technique, (2) the load-response curves were symmetric in the apical and the coronal directions, (3) both the stress response versus phase angle and the stress response versus. strain curves tended to "straighten" with increasing frequency, and (4) the phase lag between applied strain and resulting stress was small and did not differ in the intrusive and the extrusive directions. As no mechanical or time-dependent anisotropy was demonstrable in the intrusive and extrusive directions, such results may considerably simplify the development of constitutive laws for the PDL.     

AMBER force-field parameters for phosphorylated amino acids in different protonation states: phosphoserine, phosphothreonine, phosphotyrosine, and phosphohistidine

We report a consistent set of AMBER force-field parameters for the most common phosphorylated amino acids, phosphoserine, phosphothreonine, phosphotyrosine, and phosphohistidine in different protonation states. The calculation of atomic charges followed the original restrained electrostatic potential fitting procedure used to determine the charges for the parm94/99 parameter set, taking α-helical and β-strand conformations of the corresponding ACE-/NME-capped model peptide backbone into account. Missing force-field parameters were taken directly from the general AMBER force field (gaff) and the parm99 data set with minor modifications, or were newly generated based on ab initio calculations for model systems. Final parameters were validated by geometry optimizations and molecular-dynamics simulations. Template libraries for the phosphorylated amino acids in Leap format and corresponding frcmod parameter files are made available. Figure Schematic illustration of the systems used for parameter generation. Acid hydrogens are shown in red Electronic Supplementary Material Supplementary material is available for this article at