Microfossils in stromatolitic cherts from the upper proterozoic Min'yar formation, southern Ural Mountains, USSR

A diverse assemblage of exceptionally well-preserved microorganisms, including several previously unknown taxa, has been discovered in stromatolitic black chert from the ca. 680-790 Ma-old Min'yar Formation (Suite) of the southern Ural Mountains, USSR. Like most ancient and modern stromatolitic communities, the Min'yar microflora is dominated by filamentous and unicellular cyanobacteria. Geologic evidence indicates that the microbial community inhabited a shallow water, presumably marine environment. The microfossils occur in two interlaminated and thinly interbedded sedimentary fabrics: 1, fact to wavy-laminated Stratifera-like stromatolitic laminae that presumably were deposited during periods of little wave action; and 2, intraclast grainstone that formed as a result of desiccation and (or) wave agitation. Microfossils are both better preserved and more abundant in the intraclasts than in the Stratifera-like laminae. The occurrence of probable pseudomorphs after replacement of sulfate minerals provides additional evidence for a shallow water, periodically emergent depositional environment for the Min'yar microbial mats. Kerogenous microfossils are three-dimensionally preserved, permineralized in fine-grained silica of primary or early diagenetic origin. In many aspects the Min'yar assemblage is comparable to that of the well-known ca. 850 Ma-old Bitter Springs Formation of central Australia. The following taxa are herein described: Division? Schizomycophyta or ? Cyanophyta, Biocatenoides sp.; Family Oscillatoriaceae, Eomycetopsis robusta Schopf emend. Knoll and Golubic, Rhicnonema antiquum Hofmann, Entosphaeroides? sp., Palaeolyngbya? sp., Siphonophycus capitaneum n. gen., n. sp.; Family? Oscillatoriaceae or? Rivulariaceae, Caudiculophycus? sp.; Family? Scytonemataceae or? Stigonemataceae, Ramivaginalis uralensis n. gen., n. sp.; Family Chroococcaceae, Sphaerophycus medium Horodyski and Donaldson, Eosynechococcus amadeus Knoll and Golubic, Gloeodiniopsis lamellosa Schopf emend. Knoll and Golubic, Gloeodiniopsis magna n. sp., Eoaphanocapsa oparinii n. gen., n. sp.; Division? Chlorophycophyta or? Rhodophycophyta, Glenobotrydion majorinum Schopf and Blacic. Also discussed in the taxonomic section, but not formally described, are intermediate-diameter tubular sheaths (Oscillatoriaceae), small tubular sheaths enclosed by larger tubular sheaths (Oscillatoriaceae?), and undifferentiated spheroidal unicells.     

Recoupling and decoupling of nuclear spin interactions at high MAS frequencies: numerical design of CN<Stack><Subscript><Emphasis Type="Italic">n</Emphasis></Subscript><Superscript>ν</Superscript></Stack> symmetry-based RF pulse schemes

The CN _n ^ν class of RF pulse schemes, commonly employed for recoupling and decoupling of nuclear spin interactions in magic angle spinning solid state NMR studies of biological systems, involves the application of a basic “C” element corresponding to an RF cycle with unity propagator. In this study, the design of CN _n ^ν symmetry-based RF pulse sequences for achieving ¹³C–¹³C double-quantum dipolar recoupling and through bond scalar coupling mediated ¹³C–¹³C chemical shift correlation has been examined at high MAS frequencies employing broadband, constant-amplitude, phase-modulated basic “C” elements. The basic elements were implemented as a sandwich of a small number of short pulses of equal duration with each pulse characterised by an RF phase value. The phase-modulation profile of the “C” element was optimised numerically so as to generate efficient RF pulse sequences. The performances of the sequences were evaluated via numerical simulations and experimental measurements and are presented here. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Analogues of deltorphin I containing conformationally restricted amino acids in position 2: structure and opioid activity

New analogues of deltorphin I (DT I, Tyr‐d ‐Ala‐Phe‐Asp‐Val‐Val‐Gly‐NH₂), with the d ‐Ala residue in position 2 replaced by α‐methyl‐β‐azido(amino, 1‐pyrrolidinyl, 1‐piperidinyl or 4‐morpholinyl)alanine, were synthesized by a combination of solid‐phase and solution methods. All ten new analogues were tested for receptor affinity and selectivity to μ‐ and δ‐opioid receptors. The affinity of analogues containing (R) or (S)‐α‐methyl‐β‐azidoalanine in position 2 to δ‐receptors strongly depended on the chirality of the α,α‐disubstituted residue. Peptide II , containing (S)‐α‐methyl‐β‐azidoalanine in position 2, displayed excellent δ‐receptor selectivity with its δ‐receptor affinity being only three times lower than that of DT I. Copyright © 2014 European Peptide Society and John Wiley & Sons, Ltd.     

Aberrant temporal growth pattern and morphology of root and shoot caused by a defective circadian clock in Arabidopsis thaliana

Circadian clocks synchronized with the environment allow plants to anticipate recurring daily changes and give a fitness advantage. Here, we mapped the dynamic growth phenotype of leaves and roots in two lines of Arabidopsis thaliana with a disrupted circadian clock: the CCA1 over‐expressing line (CCA1ox) and the prr9 prr7 prr5 (prr975) mutant. We demonstrate leaf growth defects due to a disrupted circadian clock over a 24 h time scale. Both lines showed enhanced leaf growth compared with the wild‐type during the diurnal period, suggesting increased partitioning of photosynthates for leaf growth. Nocturnal leaf growth was reduced and growth inhibition occurred by dawn, which may be explained by ineffective starch degradation in the leaves of the mutants. However, this growth inhibition was not caused by starch exhaustion. Overall, these results are consistent with the notion that the defective clock affects carbon and energy allocation, thereby reducing growth capacity during the night. Furthermore, rosette morphology and size as well as root architecture were strikingly altered by the defective clock control. Separate analysis of the primary root and lateral roots revealed strong suppression of lateral root formation in both CCA1ox and prr975, accompanied by unusual changes in lateral root growth direction under light–dark cycles and increased lateral extension of the root system. We conclude that growth of the whole plant is severely affected by improper clock regulation in A. thaliana, resulting not only in altered timing and capacity for growth but also aberrant development of shoot and root architecture.     

Human epidermal Langerhans cells replenish skin xenografts and are depleted by alloreactive T cells in vivo

Epidermal Langerhans cells (LC) are potent APCs surveying the skin. They are crucial regulators of T cell activation in the context of inflammatory skin disease and graft-versus-host disease (GVHD). In contrast to other dendritic cell subtypes, murine LC are able to reconstitute after local depletion without the need of peripheral blood-derived precursors. In this study, we introduce an experimental model of human skin grafted to NOD-SCID IL2Rγ(null) mice. In this model, we demonstrate that xenografting leads to the transient loss of LC from the human skin grafts. Despite the lack of a human hematopoietic system, human LC repopulated the xenografts 6 to 9 wk after transplantation. By staining of LC with the proliferation marker Ki67, we show that one third of the replenishing LC exhibit proliferative activity in vivo. We further used the skin xenograft as an in vivo model for human GVHD. HLA-disparate third-party T cells stimulated with skin donor-derived dendritic cells were injected intravenously into NOD-SCID IL2Rγ(null) mice that had been transplanted with human skin. The application of alloreactive T cells led to erythema and was associated with histological signs of GVHD limited to the transplanted human skin. The inflammation also led to the depletion of LC from the epidermis. In summary, we provide evidence that human LC are able to repopulate the skin independent of blood-derived precursor cells and that this at least partly relates to their proliferative capacity. Our data also propose xeno-transplantation of human skin as a model system for studying the role of skin dendritic cells in the efferent arm of GVHD.     

Interactions between an entomopathogenic microsporidium and the endoparasitoid Glyptapanteles liparidis within their host, the gypsy moth larva

Interactions in the host-parasitoid-pathogen system, Lymantria dispar L. (Lep., Lymantriidae)-Glyptapanteles liparidis (Bouché) (Hym., Braconidae)-Vairimorpha sp. (Protista, Microspora), were investigated. Host selection experiments revealed that G. liparidis females did not discriminate between infected and uninfected host larvae for oviposition. Transmission of the microsporidium from infected to uninfected hosts by stinging female wasps could not be ascertained. Females that developed in infected L. dispar larvae did not transmit the pathogen via oviposition. Vairimorpha infection of the host negatively affected the performance of the braconid, when inoculation took place either before or after parasitization. Microsporidiosis of the host caused delayed development, reduced pupation and adult eclosion, reduction in size and weight, and reduction of adult longevity of G. liparidis. Parasitoids themselves were not systemically infected by Vairimorpha sp., but braconid larvae did ingest microsporidian spores at the end of their endoparasitic development and accumulated the undigested and ungerminated spores in the blind midgut. Negative effects of host infection on parasitoid larvae were detectable from the beginning of parasitoid larval development. Lethal time was reduced when L. dispar larvae were infected and parasitized, often at the expense of the parasitoid when G. liparidis were unable to complete endoparasitic development before the host died. Intensity of infection, measured as number of spores produced per milligram fresh weight of L. dispar larva, was slightly higher in parasitized and infected hosts than in unparasitized and infected hosts.     

The NetSage measurement and analysis framework in practice

Cluster Computing - Data sharing is required for research collaborations, but effective data transfer performance continues to be difficult to achieve. The NetSage Measurement and Analysis...