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排序方式: 共有1922条查询结果,搜索用时 781 毫秒
11.
Steven T. Gardner Emily M. Bertucci Randall Sutton Andy Horcher Doug Aubrey Benjamin B. Parrott 《Molecular ecology resources》2023,23(1):131-144
Biological ageing is connected to life history variation across ecological scales and informs a basic understanding of age-related declines in organismal function. Altered DNA methylation dynamics are a conserved aspect of biological ageing and have recently been modelled to predict chronological age among vertebrate species. In addition to their utility in estimating individual age, differences between chronological and predicted ages arise due to acceleration or deceleration of epigenetic ageing, and these discrepancies are linked to disease risk and multiple life history traits. Although evidence suggests that patterns of DNA methylation can describe ageing in plants, predictions with epigenetic clocks have yet to be performed. Here, we resolve the DNA methylome across CpG, CHG, and CHH-methylation contexts in the loblolly pine tree (Pinus taeda) and construct epigenetic clocks capable of predicting ages in this species within 6% of its maximum lifespan. Although patterns of CHH-methylation showed little association with age, both CpG and CHG-methylation contexts were strongly associated with ageing, largely becoming hypomethylated with age. Among age-associated loci were those in close proximity to malate dehydrogenase, NADH dehydrogenase, and 18S and 26S ribosomal RNA genes. This study reports one of the first epigenetic clocks in plants and demonstrates the universality of age-associated DNA methylation dynamics which can inform conservation and management practices, as well as our ecological and evolutionary understanding of biological ageing in plants. 相似文献
12.
Mapping of resistance to the potato cyst nematode Globodera rostochiensis from the wild potato species Solanum vernei 总被引:1,自引:0,他引:1
Jeanne M. E. Jacobs Herman J. van Eck Karin Horsman Paul F. P. Arens Brigitte Verkerk-Bakker Evert Jacobsen Andy Pereira Willem J. Stiekema 《Molecular breeding : new strategies in plant improvement》1996,2(1):51-60
A population of diploid potato (Solanum tuberosum) was used for the genetic analysis and mapping of a locus for resistance to the potato cyst nematode Globodera rostochiensis, introgressed from the wild potato species Solanum vernei. Resistance tests of 108 genotypes of a F1 population revealed the presence of a single locus with a dominant allele for resistance to G. rostochiensis pathotype Ro1. This locus, designated GroV1, was located on chromosome 5 with RFLP markers. Fine-mapping was performed with RAPD and SCAR markers. The GroV1 locus was found in the same region of the potato genome as the S. tuberosum ssp. andigena H1 nematode resistance locus. Both resistance loci could not excluded to be allelic. The identification of markers flanking the GroV1 locus offers a valuable strategy for marker-assisted selection for introgression of this nematode resistance.Abbreviations BSA
bulked segregant analysis
- RAPD
random-amplified polymorphic DNA
- RFLP
restriction fragment length polymorphism
- SCAR
sequence-characterized amplified region 相似文献
13.
José A. A. Sant''Ana Pereira Arnold De Haan Andy Wessels Antoon F. M. Moorman Anthony J. Sargeant 《The Histochemical journal》1995,27(9):715-722
Summary In the present study we report a novel histochemical method which, by sequential pre-incubations in alkaline and acidic media,
selectively differentiates muscle fibres expressing myosin heavy chain IIX, on the basis of a specific profile for myofibrillar
actomyosin ATPase (mATPase) activity. The enzyme reactions were tested for specificity by means of anti-myosin heavy chain
monoclonal antibodies, which were characterized on Western blots of muscle homogenates. Enzyme histochemical reactions with
the traditional pH buffers were compared to those of the new method and, in conjunction with the immunoreactions, used to
confirm the relationship between MyHC expression and the distinct profiles for mATPase. Imrnunohistochemical reactions demonstrated
that the new method only differentiates those fibres expressing myosin heavy chain IIX. The method revealed a continuum in
which the intermediate staining intensities corresponded to hybrid fibres expressing myosin heavy chain IIX in combination
with either the IIA or IIB forms. Quantitative histochemistry and immunohistochemistry (by image analysis), used to examine
the relationship between staining intensities for mATPase and amounts of myosin heavy chain IIX expression, revealed that
the new method discriminates well between hybrid fibres expressing variable amounts of the IIX isoform (r2 = 0.93). 相似文献
14.
Thomas L. German Scott Adkins Andy Witherell Kathryn E. Richmond William R. Knaack David K. Willis 《Plant Molecular Biology Reporter》1995,13(2):110-117
Mechanical inoculation ofArabidopsis thaliana ecotype Columbia with tomato spotted wilt virus led to viral replication and spread as determined by dot blot and ELISA analysis.
Severe symptoms were observed three to four weeks post-inoculation. Early symptoms were manifested as chlorotic spots on uninoculated
leaves. Later in the infection process, some plants showed complete chlorosis and wilting prior to bolting. Bolts that were
developed by infected plants were chlorotic and deformed. These preliminary results suggest thatA. thaliana could become a model system for the genetic analysis of host factors required for the replication of viruses in the family
Bunyaviridae, which includes viruses that cause important diseases of both plants and animals. 相似文献
15.
Graham N. Stone Andy Purvis 《Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology》1992,162(3):284-295
Summary This study examines the relationship between warm-up rate, body mass, metabolic rate, thermal conductance and normothermic body temperature in heterothermic mammals during arousal from torpor. Predictions based on the assumption that the energetic cost of arousal has been minimised are tested using data for 35 species. The observation that across-species warm-up rate correlates negatively with body mass is confirmed using a comparative technique which removes confounding effects due to the non-independence of species data due to shared common ancestry. Mean warm-up rate during arousal correlates negatively with basal metabolic rate and positively with the temperature difference through which the animal warms, having controlled for other factors. These results suggest that selection has operated to minimise the overall energetic, cost of warm-up. In contrast, peak warm-up rate during arousal correlates positively with peak metabolic rate during arousal, and negatively with thermal conductance, when body mass has been taken into account. These results suggest that peak warm-up rate is more sensitive to the fundamental processes of heat generation and loss. Although heterothermic marsupials have lower normothermic body temperatures and basal metabolic rates, marsupials and heterothermic eutherian mammals do not differ systematically in warm-up rate. Pre-flight warm-up rates in one group of endothermic insects, the bees, are significantly higher than predictions based on rates of arousal of a mammal of the same body mass.Abbreviations BMR
basal metabolic rate
- ICM
independent comparisons method
- MWR
mean warm-up rate
- PMR
peak metabolic rate
- PWR
peak·warm-up rate
-
Tbactivity
body temperature during activity
-
Tbtorpor
body temperature during torpor
- T
arousal
increase in body temperature during arousal 相似文献
16.
Summary We report here an improved method for nuclei counting utilizing Triton-X 100 to reduce the size of cell debris, thereby allowing the use of a particle sizer/counter. Furthermore, nuclei are completely released within 30 seconds, as compared to 1 hour using hypotonic solution. The method is accurate above 0.3 × 106 cells/mL. 相似文献
17.
The current Ebola virus outbreak has highlighted the uncertainties surrounding many aspects of Ebola virus virology, including routes of transmission. The scientific community played a leading role during the outbreak—potentially, the largest of its kind—as many of the questions surrounding ebolaviruses have only been interrogated in the laboratory. Scientists provided an invaluable resource for clinicians, public health officials, policy makers, and the lay public in understanding the progress of Ebola virus disease and the continuing outbreak. Not all of the scientific communication, however, was accurate or effective. There were multiple instances of published articles during the height of the outbreak containing potentially misleading scientific language that spurred media overreaction and potentially jeopardized preparedness and policy decisions at critical points. Here, we use articles declaring the potential for airborne transmission of Ebola virus as a case study in the inaccurate reporting of basic science, and we provide recommendations for improving the communication about unknown aspects of disease during public health crises. 相似文献
18.
19.
Nikolai Otmakhov Elena V. Gorbacheva Shaurav Regmi Ryohei Yasuda Andy Hudmon John Lisman 《PloS one》2015,10(3)
Over-activation of excitatory NMDA receptors and the resulting Ca2+ overload is the main cause of neuronal toxicity during stroke. CaMKII becomes misregulated during such events. Biochemical studies show either a dramatic loss of CaMKII activity or its persistent autonomous activation after stroke, with both of these processes being implicated in cell toxicity. To complement the biochemical data, we monitored CaMKII activation in living hippocampal neurons in slice cultures using high spatial/temporal resolution two-photon imaging of the CaMKIIα FRET sensor, Camui. CaMKII activation state was estimated by measuring Camui fluorescence lifetime. Short NMDA insult resulted in Camui activation followed by a redistribution of its protein localization: an increase in spines, a decrease in dendritic shafts, and concentration into numerous clusters in the cell soma. Camui activation was either persistent (> 1–3 hours) or transient (~20 min) and, in general, correlated with its protein redistribution. After longer NMDA insult, however, Camui redistribution persisted longer than its activation, suggesting distinct regulation/phases of these processes. Mutational and pharmacological analysis suggested that persistent Camui activation was due to prolonged Ca2+ elevation, with little impact of autonomous states produced by T286 autophosphorylation and/or by C280/M281 oxidation. Cell injury was monitored using expressible mitochondrial marker mito-dsRed. Shortly after Camui activation and clustering, NMDA treatment resulted in mitochondrial swelling, with persistence of the swelling temporarily linked to the persistence of Camui activation. The results suggest that in living neurons excitotoxic insult produces long-lasting Ca2+-dependent active state of CaMKII temporarily linked to cell injury. CaMKII function, however, is to be restricted due to strong clustering. The study provides the first characterization of CaMKII activation dynamics in living neurons during excitotoxic insults. 相似文献
20.