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101.
Comparative mapping of the barley genome with male and female recombination-derived, doubled haploid populations 总被引:5,自引:0,他引:5
Pierre Devaux Andrzej Kilian Andris Kleinhofs 《Molecular & general genetics : MGG》1995,249(6):600-608
Male (anther culture) and female (Hordeum bulbosum) derived, doubled haploid populations were used to map the barley genome and thus determine the different recombination rates occurring during meiosis in the F1 hybrid donor plants. The anther culture-derived (male recombination) population showed an 18% overall increase in recombination rate. This increased recombination rate was observed for every chromosome and most of the chromosome arms. Examination of linkage distances between individual markers revealed eight segments with significantly higher recombination in the anther culture-derived population, and one in the Hordeum bulbosum-derived population. Very strong distortions of single locus segregations were observed in the anther culture-derived population, but map distances were not affected significantly by these distortions. There were 1.047 and 0.912 recombinations per chromosome in the anther culture and Hordeum bulbosum-derived doubled haploid populations, respectively. 相似文献
102.
Yuriy Kvach Iuliia Kutsokon Anatolii Roman Andris Čeirāns Mihails Pupins Muza Kirjušina 《Zeitschrift fur angewandte Ichthyologie》2020,36(6):785-794
The Perccottus glenii is one of the most invasive of European fish species. During August-September 2019, we examined Chinese sleeper from six waterbodies in Latvia and Ukraine for parasites. Seventeen parasite species were registered, including two ciliate species, one coccidia, one monogenean, one cestode, six trematodes, three nematodes, one acanthocephalan, one parasitic copepod, and one bivalve glochidia. Maximum species richness was registered in Ukraine, with eight species at Vylkove and three species at Lake Kartal. Numbers in Latvia were generally lower with three species at Ilgas and just one at Gailezers. The parasite fauna registered in Latvia was poor overall, the richest site being the University pond. Two non-native parasite species were registered, the monogenean Gyrodactylus perccotti and the copepod Neoergasilus japonicus. Gyrodactylus perccotti was observed in Lake Kartal and the Danube delta in Ukraine, but not in Latvia, while N. japonicus only occurred in the University Pond in Latvia. This is the first record of this species in Latvia. Low parasite acquisition by the Chinese sleeper in Latvia may be caused by the release of this fish from aquaria, which is commonly registered in the region. It is likely that such low parasite loads have contributed to the formation of stable populations and the subsequent increase in expansion. 相似文献
103.
Jo?o V Neves Jonathan M Wilson Heiner Kuhl Richard Reinhardt L Filipe C Castro Pedro NS Rodrigues 《BMC evolutionary biology》2011,11(1):106
Background
The SLC11A1/Nramp1 and SLC11A2/Nramp2 genes belong to the SLC11/Nramp family of transmembrane divalent metal transporters, with SLC11A1 being associated with resistance to pathogens and SLC11A2 involved in intestinal iron uptake and transferrin-bound iron transport. Both members of the SLC11 gene family have been clearly identified in tetrapods; however SLC11A1 has never been documented in teleost fish and is believed to have been lost in this lineage during early vertebrate evolution. In the present work we characterized the SLC11 genes in teleosts and evaluated if the roles attributed to mammalian SLC11 genes are assured by other fish specific SLC11 gene members. 相似文献104.
The complete genome sequence of caulobacter phage phiCb5 has been determined, and four open reading frames (ORFs) have been identified and characterized. As for related phages, the ORFs code for maturation, coat, replicase, and lysis proteins, but unlike other Leviviridae members, the lysis protein gene of phiCb5 entirely overlaps with the replicase in a different reading frame. The lysis protein of phiCb5 is about two times longer than that of the distantly related MS2 phage and presumably contains two transmembrane helices. Analysis of the proposed genome secondary structure revealed a stable 5' stem-loop, similar to other phages, and a substantially shorter 3' untranslated region (UTR) structure with only three stem-loops. 相似文献
105.
Molecular Ecology Resources Primer Development Consortium Andris M Arias MC Barthel BL Bluhm BH Bried J Canal D Chen XM Cheng P Chiappero MB Coelho MM Collins AB Dash M Davis MC Duarte M Dubois MP Françoso E Galmes MA Gopal K Jarne P Kalbe M Karczmarski L Kim H Martella MB McBride RS Negri V Negro JJ Newell AD Piedade AF Puchulutegui C Raggi L Samonte IE Sarasola JH See DR Seyoum S Silva MC Solaro C Tolley KA Tringali MD Vasemägi A Xu LS Zanón-Martínez JI 《Molecular ecology resources》2012,12(4):779-781
This article documents the addition of 171 microsatellite marker loci and 27 pairs of single nucleotide polymorphism (SNP) sequencing primers to the Molecular Ecology Resources Database. Loci were developed for the following species: Bombus pauloensis, Cephalorhynchus heavisidii, Cercospora sojina, Harpyhaliaetus coronatus, Hordeum vulgare, Lachnolaimus maximus, Oceanodroma monteiroi, Puccinia striiformis f. sp. tritici, Rhea americana, Salmo salar, Salmo trutta, Schistocephalus solidus, Sousa plumbea and Tursiops aduncus. These loci were cross-tested on the following species: Aquila heliaca, Bulweria bulwerii, Buteo buteo, Buteo swainsoni, Falco rusticolus, Haliaeetus albicilla, Halobaena caerulea, Hieraaetus fasciatus, Oceanodroma castro, Puccinia graminis f. sp. Tritici, Puccinia triticina, Rhea pennata and Schistocephalus pungitii. This article also documents the addition of 27 sequencing primer pairs for Puffinus baroli and Bulweria bulwerii and cross-testing of these loci in Oceanodroma castro, Pelagodroma marina, Pelecanoides georgicus, Pelecanoides urinatrix, Thalassarche chrysostoma and Thalassarche melanophrys. 相似文献
106.
107.
Craig A. Stoops Saptoro Rusmiarto Dwiko Susapto Amurl Munif Heri Andris Kathryn A. Barbara Supratman Sukowati 《Journal of vector ecology》2009,34(2):200-207
A 15‐month bionomic study of Anopheles species was conducted in two ecologically distinct villages (coastal and upland) of Sukabumi District, West Java, Indonesia from June 2006 to September 2007. Mosquitoes were captured using human‐landing collections at both sites. During the study, a total of 17,100 Anopheles mosquitoes comprising 13 Anopheles species were caught: 9,151 at the coastal site and 7,949 at the upland site. Anopheles barbirostris, Anopheles maculatus, and Anopheles vagus were the predominant species caught at the coastal site, and Anopheles aconitus, Anopheles barbirostris, and An. maculatus predominated in the upland site. Overall, species were exophagic at both sites, but there was variation between species. Anopheles aconitus was endophagic at the coastal site, exophagic at the upland site, collected most often in April 2007 and had a peak landing time between 22:00 and 23:00. Anopheles sundaicus was only collected at the coastal site, exophagic, collected most often in October 2006, and had a peak landing time between 19:00 and 20:00. Potential malaria vector species such An. aconitus, An. maculatus, and An. sundaicus were present throughout the year. None of the 7,770 Anopheles tested using CSP‐ELISA were positive for malaria, although the risk for malaria outbreaks in Sukabumi district remains high. 相似文献
108.
109.
Marc Foretz Soizic Guihard Jocelyne Leclerc Véronique Fauveau Fabienne Andris Fabrizio Andreelli Sophie Vaulont Benoit Viollet 《FEBS letters》2010,584(16):3667-3671
AMP-activated protein kinase (AMPK) plays a pivotal role in regulating cellular energy metabolism. We previously showed that AMPKα1−/− mice develop moderate anemia associated with splenomegaly and high reticulocytosis. Here, we report that splenectomy of AMPKα1−/− mice worsened anemia supporting evidence that AMPKα1−/− mice developed a compensatory response through extramedullary erythropoiesis in the spleen. Transplantation of bone marrow from AMPKα1−/− mice into wild-type recipients recapitulated the hematologic phenotype. Further, AMPKα1−/− red blood cells (RBC) showed less deformability in response to shear stress limiting their membrane flexibility. Thus, our results highlight the crucial role of AMPK to preserve RBC integrity. 相似文献
110.
Kaspars Tars Janis Rumnieks Andris Kazaks Ainars Leonciks Arturs Viksna Edgars Liepinsh 《Biochemical and biophysical research communications》2010,398(4):634-1324
Gamma-butyrobetaine hydroxylase (GBBH) is a 2-ketoglutarate-dependent dioxygenase that catalyzes the biosynthesis of l-carnitine by hydroxylation of gamma-butyrobetaine (GBB). l-carnitine is required for the transport of long-chain fatty acids into mitochondria for generating metabolic energy. The only known synthetic inhibitor of GBBH is mildronate (3-(2,2,2-trimethylhydrazinium) propionate dihydrate), which is a non-hydroxylatable analog of GBB.To aid in the discovery of novel GBBH inhibitors by rational drug design, we have solved the three-dimensional structure of recombinant human GBBH at 2.0 Å resolution. The GBBH monomer consists of a catalytic double-stranded β-helix (DBSH) domain, which is found in all 2KG oxygenases, and a smaller N-terminal domain. Extensive interactions between two monomers confirm earlier observations that GBBH is dimeric in its biological state. Although many 2KG oxygenases are multimeric, the dimerization interface of GBBH is very different from that of related enzymes.The N-terminal domain of GBBH has a similar fold to the DUF971 superfamily, which consists of several short bacterial proteins with unknown function. The N-terminal domain has a bound Zn ion, which is coordinated by three cysteines and one histidine. Although several other 2KG oxygenases with known structures have more than one domain, none of them resemble the N-terminal domain of GBBH. The N-terminal domain may facilitate dimer formation, but its precise biological role remains to be discovered.The active site of the catalytic domain of GBBH is similar to that of other 2KG oxygenases, and Fe(II)-binding residues form a conserved His-X-Asp-Xn-His triad, which is found in all related enzymes. 相似文献