Circadian disruption and SCN control of energy metabolism

In this review we first present the anatomical pathways used by the suprachiasmatic nuclei to enforce its rhythmicity onto the body, especially its energy homeostatic system. The experimental data show that by activating the orexin system at the start of the active phase, the biological clock not only ensures that we wake up on time, but also that our glucose metabolism and cardiovascular system are prepared for increased activity. The drawback of such a highly integrated system, however, becomes visible when our daily lives are not fully synchronized with the environment. Thus, in addition to increased physical activity and decreased intake of high-energy food, also a well-lighted and fully resonating biological clock may help to withstand the increasing "diabetogenic" pressure of today's 24/7 society.     

Expression of Claudins and Their Prognostic Significance in Noninvasive Urothelial Neoplasms of the Human Urinary Bladder

The members of the claudin family are major integral transmembrane protein constituents of tight junctions. Normal and neoplastic tissues can be characterized by unique qualitative and quantitative distribution of claudin subtypes, which may be related to clinicopathological features. Differential diagnosis and prognosis of nonmuscle invasive tumor entities of urinary bladder epithelium are often challenging. The aim was to investigate the expression profile of claudins in inverted urothelial papillomas (IUPs), urothelial papillomas (UPs), papillary urothelial neoplasms of low malignant potential (PUNLMPs), and intraepithelial (Ta), low-grade urothelial cell carcinomas (LG-UCCs) in order to reveal potential prognostic and differential diagnostic values of certain claudins. Claudin-1, -2, -4, and -7 protein expressions detected by immunohistochemistry and clinical data were analyzed in 15 IUPs, 20 UPs, 20 PUNLMPs, and 20 LG-UCCs. UPs, PUNLMPs, and LG-UCCs showed significantly decreased claudin-1 expression in comparison to IUPs. LG-UCCs expressing claudin-4 over the median were associated with significantly shorter recurrence-free survival. PUNLMPs expressing claudin-1 over the median revealed significantly longer recurrence-free survival. High claudin-1 protein expression might help to differentiate IUP from UPs, PUNLMPs, and LG-UCCs. High claudin-4 expression may determine an unfavorable clinical course of LG-UCCs, while high claudin-1 expression in PUNLMP was associated with markedly better clinical outcome.     

Multiple sources and routes of information transmission: Implications for epidemic dynamics

In a recent paper [20], we proposed and analyzed a compartmental ODE-based model describing the dynamics of an infectious disease where the presence of the pathogen also triggers the diffusion of information about the disease. In this paper, we extend this previous work by presenting results based on pairwise and simulation models that are better suited for capturing the population contact structure at a local level. We use the pairwise model to examine the potential of different information generating mechanisms and routes of information transmission to stop disease spread or to minimize the impact of an epidemic. The individual-based simulation is used to better differentiate between the networks of disease and information transmission and to investigate the impact of different basic network topologies and network overlap on epidemic dynamics. The paper concludes with an individual-based semi-analytic calculation of R₀ at the non-trivial disease free equilibrium.     

RF personal exposimetry on employees of elementary schools, kindergartens and day nurseries as a proxy for child exposures

Personal RF exposimetry has been in the focus of the bioelectromagnetics community in the last few years. With a few exceptions, exposimetry studies focused on adults, because measuring the exposure of children, one of the most important target groups, introduces many complications.The main feature of our study is to select teachers and kindergarten caretakers as volunteers. They are expected to receive similar exposure patterns as the children because they spend the workday close to them. Thus they can stand as proxies for estimation of exposures of children.Volunteers belonging to one of two groups (elementary school teachers, n = 31; employees of kindergartens and day nurseries, n = 50) in Hungarian cities received a Personal Exposimeter (PEM) for 24 h each. Only workdays, when the volunteers worked near children, were considered. 51 additional volunteers (office workers) were measured as controls.The volunteers wore the PEMs on their bodies. Those activities marked in the exposure diaries as work were further classified into 5 categories based on the level of certainty that they actually worked near children during that activity. Subsets of the full dataset were derived and compared based on this categorization.It was found that relaxation of the selection criteria often under- or overestimates exposure. The differences of estimation depend on the frequency band and sub-population: the kindergarten and teacher groups differ in this regard. For most frequency bands the majority of data points was below the detection limit. Derived child exposures are comparable to the worktime exposure of adults (control group).     

Competing associations in bacterial warfare with two toxins

Simple combinations of common competitive mechanisms can easily result in cyclic competitive dominance relationships between species. The topological features of such competitive networks allow for complex spatial coexistence patterns. We investigate self-organization and coexistence in a lattice model, describing the spatial population dynamics of competing bacterial strains. With increasing diffusion rate the community of the nine possible toxicity/resistance types undergoes two phase transitions. Below a critical level of diffusion, the system exhibits expanding domains of three different defensive alliances, each consisting of three cyclically dominant species. Due to the neutral relationship between these alliances and the finite system size effect, ultimately only one of them remains. At large diffusion rates the system admits three coexisting domains, each containing mutually neutral species. Because of the cyclical dominance between these domains, a long term stable coexistence of all species is ensured. In the third phase at intermediate diffusion the spatial structure becomes even more complicated with domains of mutually neutral species persisting along the borders of defensive alliances. The study reveals that cyclic competitive relationships may produce a large variety of complex coexistence patterns, exhibiting common features of natural ecosystems, like hierarchical organization, phase transitions and sudden, large-scale fluctuations.     

Imaging of pediatric brain tumors using somatostatin analogue 111Ih-DTPA-D-Phe1-octreotide

Malignant solid tumors and leukemias are the second most common causes of death in childhood. The most frequent pediatric solid tumors are brain tumors. Brain tumors, especially medulloblastoma should be treated by surgery, irradiation and chemotherapy. However, chemotherapy has only moderate effect. Pediatric brain tumors, especially medulloblastomas, express somatostatin receptors. The aim of this study was the investigation of the expression of somatostatin receptors in pediatric brain tumors for diagnostic and therapeutic purpose. Fifty-six scintigraphic imagings (111In-DTPA-D-Phe1-octreotide) made in 45 children treated with brain tumor at the Unit of Oncology of the 2nd Department of Pediatrics, Semmelweis University. The diagnosis was medulloblastoma in 21 cases (46.7%). MRI scans have been performed parallel with the Octreoscan images. Octreoscan images were positive in 27 of 56 (48.2%) cases. The 27 positive Octreoscan images consisted of 16 medulloblastomas, 4 ependymomas, 4 astrocytomas and 3 glioblastomas. In 37 (66.1%) cases the results of Octreoscans were the same as those of the MRI scans. However, in 19 scans (33.9%) the outcome was different. Octreoscan imaging is not suitable for differential diagnosis in pediatric brain tumors, including medulloblastomas. Isotopes specifically binding to the somatostatin receptors (111In-DTPA-D-Phe1-octreotide) can be applied in medulloblastomas for diagnosis and follow-up treatment. In Octreoscan-positive tumors the Octreoscan images establish the opportunity to somatostatin analogue and/or specifically targeted radiation therapies.     

Host density predicts presence of cuckoo parasitism in reed warblers

In some hosts of avian brood parasites, several populations apparently escape parasitism, while others are parasitized. Many migratory specialist brood parasites like common cuckoos, Cuculus canorus , experience a short breeding season, and in order to maintain local parasite populations host densities should be sufficiently high to allow efficient nest search. However, no studies have investigated the possible effect of host density on presence of cuckoo parasitism among populations of a single host species. Here, we investigated possible predictors of common cuckoo parasitism in 16 populations of reed warblers, Acrocephalus scirpaceus , across Europe. In more detail, we quantified the effect of host density, number of host breeding pairs, habitat type, mean distance to nearest cuckoo vantage point, predation rate and latitude on the presence of cuckoo parasitism while controlling for geographical distance among study populations. Host density was a powerful predictor of parasitism. We also found a less pronounced effect of habitat type on occurrence of parasitism, while the other variables did not explain why cuckoos utilize some reed warbler populations and not others. This is the first study focusing on patterns of common cuckoo-host interactions within a specific host species on a large geographic scale. The results indicate that if host density is below a specific threshold, cuckoo parasitism is absent regardless of the state of other potentially confounding variables.     

Network analysis of protein dynamics

The network paradigm is increasingly used to describe the topology and dynamics of complex systems. Here, we review the results of the topological analysis of protein structures as molecular networks describing their small-world character, and the role of hubs and central network elements in governing enzyme activity, allosteric regulation, protein motor function, signal transduction and protein stability. We summarize available data how central network elements are enriched in active centers and ligand binding sites directing the dynamics of the entire protein. We assess the feasibility of conformational and energy networks to simplify the vast complexity of rugged energy landscapes and to predict protein folding and dynamics. Finally, we suggest that modular analysis, novel centrality measures, hierarchical representation of networks and the analysis of network dynamics will soon lead to an expansion of this field.