贵州产蜘蛛抱蛋属植物的细胞分类学研究

报道了6种贵州产蜘蛛抱蛋属植物的染色体数目和核型,并与其相应近缘种对比,联系植物的外部形态特征,探讨核型结构与形态特征的相关性.发现1个种的染色体数目为2n =36,5个种的染色体数目为2n =38,核型公式分别为:平塘蜘蛛抱蛋(Aspidistra pingtangensis),2n =38 =20m +4sm(2sat) +14st;荔波蜘蛛抱蛋(A.liboensis),2n =38 =22m(2sat)+4sm+ 12st;赤水蜘蛛抱蛋(A.chishuiensis),2n =38 =22m(2sat)+8sm +8st;伞柱蜘蛛抱蛋(A.fungilliformis),2n =36=18m (2sat) +4sm+ 14st;四川蜘蛛抱蛋(A.sichuanensis),2n =38 =22m (2sat) +4sm +12st;丛生蜘蛛抱蛋(A caespitosa),2n =38 =20m +6sm(2sat) +12st.核型类型都为2C型.其中平塘蜘蛛抱蛋、荔波蜘蛛抱蛋和赤水蜘蛛抱蛋的染色体数目和核型均为首次报道.研究结果表明,该属植物的核型结构与外部形态特征具有一定的相关性,细胞分类学研究可以为该属植物起源进化研究以及自然分类鉴定提供一定的依据.     

In vitro toxicity of nitrite on haemocytes of the tiger shrimp, Penaeus monodon, using flow cytometric analysis

This study investigated the in vitro effects of nitrite on reactive oxygen species (ROS) production, NO production, esterase activity and cell apoptosis of Penaeus monodon haemocytes. Haemocytes were in vitro exposed to different dose of nitrite (0, 0.1, 0.5, 1, 5 and 10 μM). Cellular responses of nitrite-treated haemocytes were determined by flow cytometry. The results revealed that haemocytes treated by nitrite in vitro showed conspicuous time- and dose-dependent decreases in ROS and NO production as well as esterase activity. Additionally, 0.1 and 0.5 μM nitrite did not affect the apoptotic cell ratio during the 3h experimental time, while significant increases in apoptotic cells were observed after haemocyte exposure to nitrite at 1 μM for 3h, and at 5 or 10 μM for 1h. These results indicated that nitrite suppresses cellular functions, including production of ROS and NO, and activity of esterase. Cell apoptosis of haemocytes would be induced by extracellular nitrite as doses exceed 1 μM.     

Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

Understanding how RNA binding proteins control the splicing code is fundamental to human biology and disease. Here, we present a comprehensive study to elucidate how heterogeneous nuclear ribonucleoparticle (hnRNP) proteins, among the most abundant RNA binding proteins, coordinate to regulate alternative pre-mRNA splicing (AS) in human cells. Using splicing-sensitive microarrays, crosslinking and immunoprecipitation coupled with high-throughput sequencing (CLIP-seq), and cDNA sequencing, we find that more than half of all AS events are regulated by multiple hnRNP proteins and that some combinations of hnRNP proteins exhibit significant synergy, whereas others act antagonistically. Our analyses reveal position-dependent RNA splicing maps, in vivo consensus binding sites, a surprising level of cross- and autoregulation among hnRNP proteins, and the coordinated regulation by hnRNP proteins of dozens of other RNA binding proteins and genes associated with cancer. Our findings define an unprecedented degree of complexity and compensatory relationships among hnRNP proteins and their splicing targets that likely confer robustness to cells.     

抗氧化剂对皮肤角质细胞体外寿命的影响

考察了抗氧化剂对鼠角质细胞体外培养寿命的影响。实验发现在角质细胞的体外培养过程中添加抗氧化剂有利于延长细胞的寿命,其中效果最好的是巯基乙醇,其次为过氧化氢酶和SOD,但在体外培养过程中,角质细胞生长速率仍然逐渐下降。实验还发现,添加抗氧化剂可在一定程度上提高角质细胞的克隆形成率,减缓细胞衰老速率。同时,通过考察鼠表皮角质细胞衰老动力学,获得了对应于不同抗氧化剂的细胞衰老动力学常数。      

Characterization of cyclic AMP-regulated chloride conductance in the pigmented rabbit conjunctival epithelial cells

We have previously reported that the pigmented rabbit conjunctiva is a Cl- secreting tissue, subject to cAMP, Ca2+, and PKC modulation. The present study was conducted to characterize, at the cellular and molecular levels, cAMP-regulated Cl- channels in rabbit conjunctival epithelial cells. cAMP-inducible Cl- channel properties were evaluated by monitoring the whole-cell currents using patch clamp techniques. Results showed that 10 microM forskolin significantly stimulated a glibenclamide-inhibitable whole-cell conductance by approximately five-fold. Furthermore, reduction of the Cl- concentration in the bathing solution through partial substitution of NaCl with Na-isethionate resulted in a rightward shift of the reversal potential for both baseline and forskolin-stimulated whole-cell currents from 0 to values close to the theoretical Cl- reversal potential predicted by the Nernst equation. Western blot analysis with a monoclonal antibody recognizing the epitope in the C-terminus of the cystic fibrosis transmembrane conductance regulator (CFTR) showed a positive band at its molecular weight, approximately 170 kD. Immunostaining under confocal microscopy revealed a CFTR specific signal in the apical sections of primary conjunctival epithelial cells. In addition, RT-PCR detection amplified a cDNA fragment 100% identical to the predicted portion of the cloned rabbit CFTR message. The stage is thus set for determining the extent of CFTR contribution to cAMP-regulated Cl- conductance in pigmented rabbit conjunctival epithelial cells.     

Pharmacological modulation of fluid secretion in the pigmented rabbit conjunctiva

We determined net fluid secretion rate across the pigmented rabbit conjunctiva in the presence and absence of pharmacological agents known to affect active Cl- secretion and Na+ absorption. Fluid flow across a freshly excised pigmented rabbit conjunctiva mounted between two Lucite half chambers was measured by a pair of capacitance probes in an enclosed cabinet maintained at 37 degrees C and a relative humidity of 70%. Fluid transport was also measured in the presence of compounds known to affect active Cl- secretion (cAMP, UTP, and ouabain), Na+ absorption (D-glucose), or under the Cl--free condition on both sides of the tissue. Net fluid secretion rate across the pigmented rabbit conjunctiva in the serosal-to-mucosal direction at baseline was 4.3+/-0.2 microl/hr/cm2 (mean +/- s.e.m.). Net fluid secretion rate was increased approximately two-fold by mucosally applied 1 mM 8-Br cAMP (8.4+/-0.4 microl/hr/cm2) and 10 microM UTP (9.8+/-0.6 microl/hr/cm2), but was abolished by either serosally applied 0.5 mM ouabain (0.3+/-0.1 microl/hr/cm2) or under the Cl--free conditions (0.06+/-0.04 microl/hr/cm2). Mucosal addition of 20 mM D-glucose decreased net fluid secretion rate to 1.0+/-0.5 microl/hr/cm2. In conclusion, the pigmented rabbit conjunctiva appears to secrete fluid secondary to active Cl- secretion. This net fluid secretion is subject to modulation by changes in active Cl- secretion rate and in mucosal fluid composition such as glucose concentration.     

DEVELOPMENTALLY REGULATED PLASMA MEMBRANE PROTEIN of Nicotiana benthamiana Contributes to Potyvirus Movement and Transports to Plasmodesmata via the Early Secretory Pathway and the Actomyosin System

The intercellular movement of plant viruses requires both viral and host proteins. Previous studies have demonstrated that the frame-shift protein P3N-PIPO (for the protein encoded by the open reading frame [ORF] containing 5′-terminus of P3 and a +2 frame-shift ORF called Pretty Interesting Potyviridae ORF and embedded in the P3) and CYLINDRICAL INCLUSION (CI) proteins were required for potyvirus cell-to-cell movement. Here, we provide genetic evidence showing that a Tobacco vein banding mosaic virus (TVBMV; genus Potyvirus) mutant carrying a truncated PIPO domain of 58 amino acid residues could move between cells and induce systemic infection in Nicotiana benthamiana plants; mutants carrying a PIPO domain of seven, 20, or 43 amino acid residues failed to move between cells and cause systemic infection in this host plant. Interestingly, the movement-defective mutants produced progeny that eliminated the previously introduced stop codons and thus restored their systemic movement ability. We also present evidence showing that a developmentally regulated plasma membrane protein of N. benthamiana (referred to as NbDREPP) interacted with both P3N-PIPO and CI of the movement-competent TVBMV. The knockdown of NbDREPP gene expression in N. benthamiana impeded the cell-to-cell movement of TVBMV. NbDREPP was shown to colocalize with TVBMV P3N-PIPO and CI at plasmodesmata (PD) and traffic to PD via the early secretory pathway and the actomyosin motility system. We also show that myosin XI-2 is specially required for transporting NbDREPP to PD. In conclusion, NbDREPP is a key host protein within the early secretory pathway and the actomyosin motility system that interacts with two movement proteins and influences virus movement.The movement of viruses in plants can be divided into three stages: intracellular, intercellular, and long-distance movement (Nelson and Citovsky, 2005; Benitez-Alfonso et al., 2010). Plasmodesmata (PD) are plasma membrane-mediated channels in cell walls that control the intercellular trafficking of micromolecules and macromolecules, including plant viruses (Boevink and Oparka, 2005; Lucas et al., 2009). Plant viruses encode movement proteins (MPs) that can regulate the size exclusion limit (SEL) of PD and mediate virus trafficking between cells (Lucas, 2006; Raffaele et al., 2009; Amari et al., 2010; Ueki et al., 2010). Based on the functions of MPs during virus movement, the viral MPs are divided into three major groups. The first group of MPs is represented by the 30-kD protein of Tobacco mosaic virus (TMV). The 30-kD proteins can interact with single-stranded RNAs and transport viral ribonucleoprotein complexes to cell walls, where they modify the SEL of PD to allow viruses to traverse the cell walls (Olesinski et al., 1996; Tzfira et al., 2000; Kawakami et al., 2004). The second group of MPs is known to form tubular structures that extend across the PD and allow virus to traverse. Viruses that encode this group of MPs include Cowpea mosaic virus, Grapevine fan leaf virus (GFLV), Cauliflower mosaic virus, and Tomato spotted wilt virus (Ritzenthaler and Hofmann, 2007; Amari et al., 2011). The third group of MPs is known as triple gene block proteins (TGBps), encoded by overlapping triple gene blocks. The three TGBps (TGBp1, TGBp2, and TGBp3) function coordinately to transport viral genomes to and through PD (Verchot-Lubicz, 2005; Jackson et al., 2009; Lim et al., 2009; Tilsner et al., 2013). Viruses that encode TGBps belong to the genera Potexvirus, Hordeivirus, and Pomovirus (Verchot-Lubicz et al., 2010). Potyviruses are different from the above viruses and lack a dedicated MP. To date, multiple potyviral proteins, including COAT PROTEIN, CYLINDRICAL INCLUSION (CI), HELPER COMPONENT PROTEINASE (HC-Pro), and VIRAL GENOME-LINKED PROTEIN, have been shown to function in the cell-to-cell movement of potyviruses (Nicolas et al., 1997; Rojas et al., 1997; Carrington et al., 1998; Wei et al., 2010).Viruses of Potyvirus (family Potyviridae), the largest genus of plant-infecting viruses, cause great economic losses to world agriculture production (Fauquet et al., 2005). The potyviral genome is a positive sense, single-stranded RNA of approximately 10 kb in length. It contains a large open reading frame (ORF) encoding a polyprotein that is later processed into 10 mature proteins by three virus-encoded proteinases (Riechmann et al., 1992; Fauquet et al., 2005). A +2 frame-shift Pretty Interesting Potyviridae (PIPO) ORF that is embedded within the P3 ORF was recently identified and proposed to produce a P3N-PIPO (for the protein encoded by 5′-terminus of P3 and frame-shift PIPO) fusion (Chung et al., 2008; Vijayapalani et al., 2012). The P3N-PIPOs of Turnip mosaic virus (TuMV) and Tobacco etch virus were previously shown to localize at PD, interact with CI in planta, and transport CI to PD in a CI:P3N-PIPO ratio-dependent manner (Wei et al., 2010). Soybean mosaic virus with a mutant PIPO domain failed to cause systemic infection in its host plant (Wen and Hajimorad, 2010). Therefore, the potyvirus P3N-PIPO has been suggested as the classical MP (Tilsner and Oparka, 2012; Vijayapalani et al., 2012).Viruses recruit host factors for their movement in plants (Chen et al., 2000; Raffaele et al., 2009; Amari et al., 2010; Ueki et al., 2010). Compared with the progresses on viral MP characterization, identifications of MP-interacting host proteins are much behind (Chen et al., 2000; Oparka, 2004; Raffaele et al., 2009; Amari et al., 2010). To date, about 20 host proteins have been identified to interact with specific viral MPs (Pallas and García, 2011). For example, the pectin methylesterase interacted with TMV MP, increased the SEL of PD, and facilitated TMV movement between cells (Chen et al., 2000); an ankyrin repeat-containing protein (ANK) interacted with TMV MP at PD, down-regulated callose formation, and aided viral movement (Ueki et al., 2010); the Arabidopsis (Arabidopsis thaliana) PLASMODESMATA-LOCALIZED PROTEIN1 (AtPDLP1) was reported to interact with GFLV MP and mediate tubule assembly during GFLV cell-to-cell movement in plants (Amari et al., 2010, 2011). TuMV P3N-PIPO was shown to interact with AtPCaP1, a plasma membrane cation-binding protein of Arabidopsis, and colocalize with this host protein at the PD. Knockout of AtPCaP1 expression resulted in a significant reduction of TuMV infection in Arabidopsis (Vijayapalani et al., 2012).Many viral MPs have been shown to traffic within plant cells via the early secretory pathway and/or along the actin filaments or microtubules. For example, the early secretory pathway and microtubules were required for GFLV MP trafficking to PD (Laporte et al., 2003). TuMV P3N-PIPO and CI were reported to utilize the early secretory pathway rather than the actomyosin motility system for their trafficking to PD (Wei et al., 2010). Several plant myosin motor proteins have been reported to participate in virus intracellular movement (Wei and Wang, 2008; Harries et al., 2010). Myosins VIII-1, VIII-2, and VIII-B were shown to transport a HEAT SHOCK PROTEIN70 homolog of Beet yellows virus to PD (Avisar et al., 2008a), but only myosin VIII-1 was needed for the nonstructural protein encoded by viral complementary strand of RNA4 (NSvc4) of Rice stripe virus traffic to PD (Yuan et al., 2011). A more recent study has indicated that both the secretory pathway and myosins XI-2 and XI-K were required for TuMV cell-to-cell movement (Agbeci et al., 2013). However, it remains largely unknown how the MP-interacting host factor(s) reach their target sites in cells.Tobacco vein banding mosaic virus (TVBMV) is a distinct potyvirus mainly infecting solanaceous crops (Tian et al., 2007; Yu et al., 2007; Zhang et al., 2011). In this article, we provide evidence showing the length requirements of the PIPO domains for its function in mediating TVBMV movement and the restoration of the movement-defective TVBMV mutants. We also show the interactions between TVBMV P3N-PIPO and CI and NbDREPP, a developmentally regulated plasma membrane protein in Nicotiana benthamiana, and the route by which NbDREPP traffics to PD. Silencing of NbDREPP expression in N. benthamiana significantly impeded the cell-to-cell movement of TVBMV.     

XRCC1 Polymorphisms and Urinary 8-Hydroxydeoxyguanine Levels Are Associated with Urothelial Carcinoma

The aim of this study was to examine the associations between the combined effects of urinary 8-Hydroxydeoxyguanine (8-OHdG) level and polymorphisms of XRCC1 Arg194Trp and XRCC1 Arg399Gln on the risk of urothelial carcinoma (UC). We conducted a hospital-based case-control study that included 168 cases of UC and 336 age- and gender-matched healthy controls. We used polymerase chain reaction and restriction fragment length polymorphism analyses to examine the genotypes of XRCC1 Arg194Trp and XRCC1 Arg399Gln. We used a competitive in vitro enzyme-linked immunosorbent assay to determine urinary 8-OHdG levels. The XRCC1 399 Gln/Gln genotype and the XRCC1 194 Arg/Arg genotype were positively correlated to UC (OR [95%CI] = 2.27 [1.20–4.27] and 1.59 [1.06–2.36], respectively). Urinary 8-OHdG levels were associated with UC in a dose-dependent manner. Participants with the XRCC1 (Arg399Gln) Gln/Gln genotype or the G-C/A-C haplotype of XRCC1 and a high urinary 8-OHdG level had a significantly higher risk of UC than those with the Arg/Arg + Arg/Gln genotype or the G-T haplotype and a low urinary 8-OHdG level. This is the first study to investigate the combined effect of urinary 8-OHdG level and XRCC1 polymorphisms on UC risk. The findings are especially meaningful for participants with XRCC1 399Gln or XRCC1 Arg194 genotypes and a high urinary 8-OHdG level, since these variables are associated with an increased risk of UC.     

p53过表达抑制同源盒基因NKX3.1启动子活性

NKX3.1是前列腺特异表达的同源盒基因,在前列腺癌的发生发展中起重要作用,而在前列腺癌进展中常会发生p53的基因突变.为研究两者之间的关系,构建NKX-3.1启动子(1 040bp)-荧光素酶报告基因重组质粒（pGL3-1040）及其缺失突变体,瞬时转染前列腺癌细胞LNCaP.通过荧光素酶表达活性分析,检测p53过表达对NKX3.1启动子活性的影响.结果表明：p53在LNCaP细胞中过表达可明显抑制NKX3.1启动子活性;RT-PCR及Western印迹检测p53过表达对NKX3.1表达的影响.结果表明,p53过表达可以明显抑制同源盒基因NKX3.1的表达.通过TRANSFAC软件分析,在NKX3.1基因上游-526至-507区存在一个p53反应元件的5′核心序列.缺失pGL3-1040中的p53反应元件核心序列并不能消除p53对NKX3.1启动子的抑制作用,表明p53不是通过p53反应元件直接抑制NKX3.1启动子活性.进一步通过5′缺失突变分析,发现NKX3.1启动子-140～+8 bp区仍受p53负调控.此148 bp区域中含有一个Sp1和一个CREB元件,瞬时共转染Sp1表达载体或CREB表达载体的结果表明,p53并不是通过与Sp1或CREB相互作用对NKX3.1启动子发挥抑制作用的.上述结果表明,p53过表达可以抑制同源盒基因NKX3.1启动子活性,下调NKX3.1基因的转录,其调控机制有待进一步研究.     

琥珀蚕丝腺转录因子基因AaSGF-1的克隆、原核表达及组织表达分析

[目的]本研究旨在克隆琥珀蚕Antheraea assama丝腺转录因子基因AaSGF-1,分析其序列特征及表达模式并制备多克隆抗体,为探讨该基因的生理功能奠定基础.[方法]采用RT-PCR和RACE技术从琥珀蚕丝腺中克隆AaSGF-1的cDNA序列,并进行生物信息学分析;利用qPCR检测AaSGF-1在琥珀蚕5龄第4...