Fluorescence decay kinetics of the tryptophyl residues of myoglobin: effect of heme ligation and evidence for discrete lifetime components

The fluorescence decay kinetics of the tryptophyl residues of sperm whale and yellowfin tuna myoglobin have been determined by using time-correlated single photon counting, with picosecond resolution. Purification by HPLC techniques resulted in the isolation of samples that exclusively displayed picosecond decay kinetics. Lifetimes of 24.4 ps for Trp14 and 122.0 ps for Trp7 were found for oxy sperm whale myoglobin (pH 7), which agree with theoretical predictions [Hochstrasser, R. M., & Negus, D. K. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 4399-4403]. The effects of ligand binding and pH on the decay kinetics were investigated, and the results were shown to be consistent with the known crystal structures. Data for the met form of sperm whale myoglobin were analyzed both in terms of a sum of discrete exponential components and as a continuous gamma distribution of exponential decays. The results were not found to support the existence of multiple, structurally distinct conformation states in myoglobin.     

The protection against gentamicin nephrotoxicity in the streptozotocin-induced diabetic rat is not related to gender.

Since gender can influence the renal toxicity of a drug in a given species, the present study was undertaken to evaluate the role of sex in the protection against gentamicin (G)-induced nephrotoxicity afforded by diabetes mellitus (DM) in the rat. We have compared the effects of administration of G (40 mg/kg/day, for 14 days) on male and female DM Sprague-Dawley rats. Non-diabetic animals of both sexes receiving identical doses of G served as controls. At the end of the experiment on day 14, both female (F) and male (M) control groups had similar and marked evidence of nephrotoxicity: elevation of plasma creatinine (F 1.7 +/- 0.7; M 2.8 +/- 0.6 mg/dl), decrease in endogenous 24-h creatinine clearance (Ccr) (F0.3 +/- 0.1; M 0.2 +/- 0.1 ml/min/100 g BW), and histological evidence of severe acute tubular necrosis. In marked contrast, the DM rats showed no functional or morphological evidence of renal damage throughout the study regardless of their gender (day 14: plasma creatinine: F 0.2 +/- 0.03; M 0.2 +/- 0.02; Ccr: F 1.2 +/- 0.1; M 1.6 +/- 0.1 ml/min/100 g BW), and they also accumulated less G in their kidney cortex than the C rats. The male controls exhibited higher renal cortex accumulation of G than the female controls (p < 0.05), whereas the opposite occurred in the DM groups (p < 0.01). Because the validity of using Ccr for the evaluation of GFR changes in experimental nephrotoxicity has been questioned, we have compared, in a separate experiment, three different methods of estimation of GFR (simultaneous short clearances of inulin and Ccr, and 24-h Ccr) in conscious female Sprague-Dawley rats undergoing the same treatment with G described above. At no time during the study did the method used for estimation of the GFR influence the results. We conclude that male and female Sprague-Dawley rats with diabetes are functionally and morphologically equally protected against G. Furthermore, no gender-related differences in the magnitude of G-induced nephrotoxicity was demonstrated in the non-diabetic control animals.     

北方农牧交错带温性盐碱化草地土壤呼吸对不同形态氮添加和刈割的响应

农牧交错带草地生态系统兼受农业和牧业的影响, 属于脆弱生态系统, 尤其是养分贫瘠的盐碱化草地, 其生态系统结构和功能对外界干扰的响应更加强烈。位于晋西北地区的农牧交错带盐碱化草地, 地理位置独特, 区别于天然牧区草地生态系统。由于毗邻农田, 农业氮肥的过量使用促进了活性氮气体排放, 同时使得农牧交错带草地土壤碳氮循环发生改变。刈割是北方农牧交错草地生态系统的主要管理方式, 为了深入探究氮添加和刈割管理方式对农牧交错带草地碳循环的影响, 进一步厘清该区域草地生态系统的碳动态问题, 该研究设置了一个不同形态氮添加和刈割的裂区实验, 测定土壤呼吸对不同形态氮肥添加和刈割的响应, 为进一步科学管理该区域草地提供可靠的依据。实验样地位于山西省右玉县境内的“山西农业大学农牧交错带草地生态系统野外观测研究站”, 于2017年设置不同形态氮添加和刈割处理, 实验处理包括对照(不刈割和刈割)、尿素添加、缓释尿素添加、刈割+尿素添加、刈割+缓释尿素添加, 每种处理6个重复, 共36个小区。在不同处理条件下测定土壤呼吸速率、土壤温度、土壤水分、土壤微生物生物量、土壤无机氮含量、植物地上和地下生物量, 并计算土壤累积碳排放量及CO₂通量。研究结果表明: (1)短期(2017-2018年)尿素和缓释尿素的添加显著提高了该地区土壤呼吸速率和土壤累积碳排放量。与添加缓释尿素相比, 添加尿素处理下的土壤呼吸速率和累积碳排放量更高; (2)刈割显著降低土壤呼吸速率和累积碳排放量; (3)短期氮添加和刈割的交互作用对土壤呼吸速率没有显著影响。因此, 短期氮添加促进了北方农牧交错带盐碱化草地土壤碳释放, 刈割抑制土壤呼吸, 降低了累积碳排放量, 这可能是由于刈割移除地上植物, 减少了凋落物的输入, 底物减少导致土壤微生物活性降低。但是随着处理时间的延长, 氮添加和刈割对该农牧交错带盐碱化草地土壤碳动态的影响还有待进一步探究和发现。     

Impacts of long-term snow climate change on a high-elevation cold desert shrubland, California, USA

Ecological responses to 50-year old manipulations of snow depth and melt timing were assessed using snow fences arrayed across 50 km of a shrub–conifer landscape mosaic in eastern California, USA. We compared how increased, decreased, and ambient snow depth affected patterns of vegetation community composition, fire fuel accumulation, and annual tree ring growth. We also tested the effect of snow depth on soil carbon storage based on total C content under the two co-dominant shrub species (Artemisia tridentata and Purshia tridentata) in comparison with open, intershrub sites. Increased snow depth reduced the cover of the N-fixing shrub P. tridentata but not the water-redistributing shrub A. tridentata. Annual ring growth was greater on +snow plots and lower on ?snow plots for the conifer Pinus jeffreyi but not for Pinus contorta. Graminoid cover and aboveground biomass indicated higher fire fuel accumulation where snow depth was increased. Dead shrub stem biomass was greater regardless of whether snow depth was increased or decreased. Results demonstrate community shifts, altered tree growth, feedbacks on carbon storage, and altered fire fuel accumulation as a result of changes in snow depth and melt timing for this high-elevation, snow-dominated ecotone under future climate scenarios that envision increased or decreased snow depth.     

Unravelling mitochondrial retrograde regulation in the abiotic stress induction of rice ALTERNATIVE OXIDASE 1 genes

Mitochondrial retrograde regulation (MRR) is the transduction of mitochondrial signals to mediate nuclear gene expression. It is not clear whether MRR is a common regulation mechanism in plant abiotic stress response. In this study, we analysed the early abiotic stress response of the rice OsAOX1 genes, and the induction of OsAOX1a and OsAOX1b (OsAOX1a/b) was selected as a working model for the stress‐induced MRR studies. We found that the induction mediated by the superoxide ion (O_2·^‐)‐generating chemical methyl viologen was stronger than that of hydrogen peroxide (H₂O₂). The addition of reactive oxygen species (ROS) scavengers demonstrated that the stress induction was reduced by eliminating O_2·^‐. Furthermore, the stress induction did not rely on chloroplast‐ or cytosol‐derived O_2·^‐. Next, we generated transgenic plants overexpressing the superoxide dismutase (SOD) gene at different subcellular locations. The results suggest that only the mitochondrial SOD, OsMSD, attenuated the stress induction of OsAOX1a/b specifically. Therefore, our findings demonstrate that abiotic stress initiates the MRR on OsAOX1a/b and that mitochondrial O_2·^– is involved in the process.     

Bone marrow–derived mesenchymal stromal cells ameliorate severe acute pancreatitis in rats via hemeoxygenase-1–mediated anti-oxidant and anti-inflammatory effects

Background and aims

It has been previously verified that mesenchymal stromal cells (MSCs) have a good therapeutic effect on severe acute pancreatitis (SAP) and the potential for regeneration of damaged pancreatic tissue, but the exact molecular mechanism remains unclear. In this study, we demonstrated the therapeutic effect of bone morrow MSCs (BMSCs) on SAP, probably by targeting heme oxygenase-1 (HO-1).

Insulin-like growth factor 2 regulates the proliferation and differentiation of rat adipose-derived stromal cells via IGF-1R and IR

BackgroundInsulin-like growth factor 2 (IGF2), an essential component of the stem cell niche, has been reported to modulate the proliferation and differentiation of stem cells. Previously, a continuous expression of IGF2 in tissues was reported to maintain the self-renewal ability of several types of stem cells. Therefore, in this study, we investigated the expression of IGF2 in adipose tissues and explored the effects of IGF2 on adipose-derived stromal cells (ADSCs) in vitro.MethodsThe expression pattern of IGF2 in rat adipose tissues was determined by gene expression and protein analyses. The effect of IGF2 on proliferation, stemness-related marker expression and adipogenic and osteogenic differentiation was systematically investigated. Furthermore, antagonists of IGF2-specific receptors—namely, BMS-754807 and picropodophyllin—were added to explore the underlying signal transduction mechanisms.ResultsIGF2 levels displayed a tendency to decrease with age in rat adipose tissues. After the addition of IGF2, isolated ADSCs displayed higher proliferation and expression of the stemness-related markers NANOG, OCT4 and SOX2 and greater differentiation potential to adipocytes and osteoblasts. Additionally, both type 1 insulin-like growth factor receptor (IGF-1R) and insulin receptor (IR) participated in the IGF2-mediated promotion of stemness in ADSCs.ConclusionsOur findings indicate that IGF2 could enhance the stemness of rat ADSCs via IGF-1R and IR and may highlight an effective method for the expansion of ADSCs for clinical application.     

基于转录组的肝豆状核变性调控网络的构建和分析

本研究旨在利用生物信息学方法构建经铜诱导的ATP7B基因敲除HepG2细胞系的转录调控网络。探讨关键转录因子在肝豆状核变性发生、发展中的潜在作用机制。收集公共基因表达数据库(gene expression omnibus, GEO)中包含野生型、ATP7B基因敲除型、铜诱导的野生型和铜诱导的ATP7B基因敲除型HepG2细胞系数据。筛选由铜诱导产生的差异表达基因(differentially expressed genes,DEGs)后进行基因本体论(gene ontology,GO)、京都基因和基因组百科全书(Kyoto encyclopedia of genes and genomes, KEGG)富集分析。基于蛋白相互作用网络,识别疾病关键基因和功能模块,并对关键功能模块中的基因进行富集分析。最后,构建转录调控网络,筛选核心转录因子。共筛选出1 034个差异表达基因,其中上调525个,下调509个。上、下调关键功能模块分别包括了3785个和3931个基因。关键功能模块中的基因主要定位于细胞-基质连接、染色体、剪接复合体、核糖体等区域,共同参与了mRNA加工、组蛋白修饰、RNA剪切...     

鸭绿江香鱼耳石日轮与生长的研究

１９９２年对鸭绿江香鱼耳石日轮与生长进行了研究。人工受精卵胚胎发育后期和前仔鱼期连续剖察表明，受精后约９６小时胚体听囊内出现一对矢耳石，孵出后第２天耳石上出现第一个日轮，之后每天形成一轮。在光镜和扫描电镜下测定了幼、成鱼矢耳石的形态、直径、日轮数及其间距变化。耳石短径（ｖ， μｍ）与鱼体长（ｘ， ｍｍ）呈线性关系， ７５尾幼、成鱼的关系式为ｙ＝３．２８ｘ＋２４８．３０。以耳石日轮数推算其产卵孵化期与实地调查结果一致。耳石日轮数（Ｄ）可用孵化后日数（Ｎ）减１表示。日轮间距有规律性变化，与鱼体生长发育和生态条件密切有关。依据日龄和相关体长体重资料进行了香鱼生长特性研究，用生长方程描绘的生长速度曲线和生长拐点（位于２８３日龄）等均较客观地反映了其生长特点。