Characterization of tetranucleotide microsatellite loci and development and validation of multiplex reactions for the study of right whale species (genus Eubalaena)

A North Atlantic right whale (Eubalaena glacialis) genomic library was developed and screened with a (GATA)₈ probe to identify tetranucleotide microsatellite loci. Sixteen characterized loci were polymorphic in North Atlantic and/or South Atlantic (Eubalaena australis) right whales, 12 being polymorphic in E. glacialis, and 15 in E. australis. Fourteen of these were combined with 21 other previously identified loci for a suite of 35 loci which can be used to increase resolution of genetic analyses of these species. Multiplex reactions were developed for genotyping samples at these loci, providing a method that is rapid, reliable and cost‐effective.     

Trout Salmo spp. complex in Serbia and adjacent regions of the western Balkans: reconstruction of evolutionary history from external morphology

The multivariate phenetic approach to the classification of Salmo spp. samples from Serbia and adjacent regions of western Balkans for 22 continuous external morphological characters suggests the occurrence of the following distinct stocks: West Danubian (Crno Osoje Stream and upper Zeta River) Salmo taleri , marble trout Salmo marmoratus (Trebuščica River), hatchery-reared Atlantic Salmo trutta , Mlava River drainage (Mlava and Krupaja rivers and Buk Stream) trout Salmo cf. trutta , Velika Morava River system (Godljevača, Bela and Resava rivers) trout S. cf. trutta , Ohrid Lake belvica Salmo ohridana and Aegean coastal drainage Salmo macedonicus (Božica River). In contrast to the phenetic similarity, the phylogenetic reconstruction places the Lake Ohrid belvica as part of an unresolved polytomy with other trout groups. Salmo cf. trutta in the Mlava River appears to form the basal group for the trout species in the region. The position of marble trout implies its independent and more recent origin from the West Danubian trout stock.     

Hypermodified nucleoside carboxyl group as a target site for specific tRNA modification

The free carboxyl group of hypermodified nucleosides N6-methyl-N6-(threoninocarbonyl)adenosine (mt6A37) and 3-(3-amino-3-carboxypropyl)uridine (acp3U20:1) in tRNAmMet (yellow lupine), and N6-(threoninocarbonyl)adenosine (t6A37) in tRNAiMet (yellow lupine) can be converted quantitatively and under very mild conditions into the respective anilides in a reaction with aniline and a water-soluble carbodiimide. The tRNA reactions proceed with rates very similar to that reported previously for t6A nucleoside. Detailed analysis of the products of tRNA modification with [3H]aniline on tRNA (chromatography on BD-DEAE-cellulose), oligonucleotide (polyacrylamide gel electrophoresis) and nucleoside (HPLC on Aminex A6) levels clearly indicates that only the hypermodified nucleoside residues undergo the reaction. The site of modification is confirmed for mono-modified (at mt6A37) and bis-modified (at mt6A37 and acp3U20:1) tRNAmMet, and for mono-modified (at t6A37) tRNAiMet by sequence analysis using 5'end 32P-labeled tRNAs. The modification procedure seems to be universally applicable for all hypermodified nucleosides bearing a free carboxyl group and for different amine reagents designed for the studies on tRNA function.