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101.
Plant Ecology - A critical stage in the establishment of new individuals is seedling emergence and litter is a main factor affecting this stage. Recent research found that adults of Chuquiraga... 相似文献
102.
Dánae Cabrera-Toledo Jorge González-Astorga Andrew P. Vovides Alejandro Casas Ofelia Vargas-Ponce Pablo Carrillo-Reyes Janet Nolasco-Soto Ernesto Vega 《Population Ecology》2019,61(1):62-73
Ecological and microevolutionary perspectives were used to investigate signs of background extinction in two endemic species. We studied relict populations of the cycad Dioon caputoi, contrasting its population structure and neighborhood size with those of Dioon planifolium as a demographically healthier reference population. Population dynamics analysis was performed on two populations of D. caputoi through Integral Projection Models and genetic neighborhoods compared between species through 172 Inter Simple Sequence Repeat loci performed in one population of each of the two study species. The D. caputoi populations mostly comprised adult plants, while D. planifolium presented mainly juvenile individuals. Dioon caputoi showed equilibrium in population growth (i.e., λ ≈ 1), with low recruitment, and its genetic neighborhood revealed highly related individuals in a unique distance class (rij = 0.407, 33 m). A contrasting pattern was found in D. planifolium, which showed higher relatedness in the first distance class (rij = 0.543, 5 m), gradually decreasing to 20 m. The discrepancies between the two species reflect different strategies of persistence. Dioon caputoi conserves a relict dynamics with signs of a multigenerational, attritional loss of reproductive fitness, while D. planifolium does not. This study furthers our understanding of the background extinction process and the information will thus contribute to the management and conservation of this endangered species. 相似文献
103.
Jorge Aramburu Raúl Antón Alejandro Rivas Juan Carlos Ramos Gorka S. Larraona Bruno Sangro 《Computer methods in biomechanics and biomedical engineering》2019,22(5):518-532
Balloon-occluded transarterial chemoembolisation (B-TACE) is an intraarterial transcatheter treatment for liver cancer. In B-TACE, an artery-occluding microballoon catheter occludes an artery and promotes collateral circulation for drug delivery to tumours. This paper presents a methodology for analysing the haemodynamics during B-TACE, by combining zero-dimensional and three-dimensional modelling tools. As a proof of concept, we apply the methodology to a patient-specific hepatic artery geometry and analyse two catheter locations. Results show that the blood flow redistribution can be predicted in this proof-of-concept study, suggesting that this approach could potentially be used to optimise catheter location. 相似文献
104.
Paula Escuer Vadim A. Pisarenco Angel A. Fernndez-Ruiz Joel Vizueta Jose F. Snchez-Herrero Miquel A. Arnedo Alejandro Snchez-Gracia Julio Rozas 《Molecular ecology resources》2022,22(1):375-390
Here, we present the chromosome-level genome assembly of Dysdera silvatica Schmidt, 1981, a nocturnal ground-dwelling spider endemic from the Canary Islands. The genus Dysdera has undergone a remarkable diversification in this archipelago mostly associated with shifts in the level of trophic specialization, becoming an excellent model to study the genomic drivers of adaptive radiations. The new assembly (1.37 Gb; scaffold N50 of 174.2 Mb), was performed using the chromosome conformation capture scaffolding technique, represents a continuity improvement of more than 4500 times with respect to the previous version. The seven largest scaffolds or pseudochromosomes, which cover 87% of the total assembly size, probably correspond with the seven chromosomes of the karyotype of this species, including a characteristic large X chromosome. To illustrate the value of this new resource we performed a comprehensive analysis of the two major arthropod chemoreceptor gene families (i.e., gustatory and ionotropic receptors). We identified 545 chemoreceptor sequences distributed across all pseudochromosomes, with a notable underrepresentation in the X chromosome. At least 54% of them localize in 83 genomic clusters with a significantly lower evolutionary distances between them than the average of the family, suggesting a recent origin of many of them. This chromosome-level assembly is the first high-quality genome representative of the Synspermiata clade, and just the third among spiders, representing a new valuable resource to gain insights into the structure and organization of chelicerate genomes, including the role that structural variants, repetitive elements and large gene families played in the extraordinary biology of spiders. 相似文献
105.
Alejandro G. Farji-Brener G. Barrantes O. Laverde K. Fierro-Calderón F. Bascopé Adriana López 《Biotropica》2007,39(2):211-215
Fallen branches, logs, and exposed roots (fallen branches hereafter) commonly form part of the trunk trail system of leaf-cutting ants that inhabit the tropical rain forest. We studied the role of fallen branches on resource discovering and on leaf transport rates in Atta cephalotes . Fallen branches were common components of the A. cephalotes trail system; they were present in all the nests, and in the majority of the trunk trails examined (13/16). A field experiment revealed that, at the beginning of their foraging activity, ants discovered food sources located at the end of fallen branches earlier than those located on the leaf litter. Additionally, laden ants walked faster along a fallen branch than along soil tracks of the trunk trails. This increment in speed was higher in slow-walking ants ( e.g. , with larger loads) than in fast-walking ants ( e.g. , with smaller loads). These results suggest that the presence of fallen branches may direct the searching effort of leaf-cutters and increase the foraging speed of laden ants when these structures are part of the trunk trail system. The advantages of using fallen branches as part of a trail system, and their potential consequences in the spatial foraging pattern of leaf-cutting ants, are discussed. 相似文献
106.
Gonzalez-Voyer A Székely T Drummond H 《Evolution; international journal of organic evolution》2007,61(8):1946-1955
In many parentally fed species, siblings compete for food not only by begging and scrambling, but also by violently attacking each other. This aggressive competition has mostly been studied in birds, where it is often combined with dominance subordination, aggressive intimidation, and siblicide. Previous experimental and theoretical studies proposed several life-history, morphological, and behavioral variables that may facilitate the evolution of broodmate aggression, and explain its taxonomic distribution. Here we apply phylogenetic comparative analyses for the first time to test the influence of five hypothesized facilitators of the evolution of broodmate aggression, analyzing 69 species in seven avian families using two quantitative measures of aggression: incidence and intensity. We show that incidence and intensity of aggression increase with long nestling periods and indirect feeding, and small brood size is associated with intense aggression. Large food parcels were not correlated with either the incidence or intensity of aggression. Our study suggests that indirect feeding, long nestling periods, and small broods, possibly in combination with other factors, have tended to favor the evolution of aggressive broodmate competition. 相似文献
107.
Morán-Zorzano MT Viale AM Muñoz FJ Alonso-Casajús N Eydallín GG Zugasti B Baroja-Fernández E Pozueta-Romero J 《FEBS letters》2007,581(5):1035-1040
Escherichia coli ADP-sugar pyrophosphatase (AspP) is a "Nudix" hydrolase that catalyzes the hydrolytic breakdown of ADP-glucose linked to glycogen biosynthesis. Moderate increases of AspP activity in the cell are accompanied by significant reductions of the glycogen content. In vitro analyses showed that AspP activity is strongly enhanced by macromolecular crowding and by both glucose-1,6-bisphosphate and nucleotide-sugars, providing a first set of indicative evidences that AspP is a highly regulated enzyme. To our knowledge, AspP is the sole bacterial enzyme described to date which is activated by both G1,6P(2) and nucleotide-sugars. 相似文献
108.
Kim JC Laparra H Calderón-Urrea A Mottinger JP Moreno MA Dellaporta SL 《Genetics》2007,177(4):2547-2551
The maize sex determination pathway results in the arrest of stamen in ear spikelets and the abortion of pistils in both the tassel spikelets and in the secondary florets of ear spikelets. Arrested stamen cells showed no signs of DNA fragmentation, an absence of CYCLIN B expression, and an accumulation of the negative cell cycle regulator WEE1 RNA. 相似文献
109.
Morán-Barrio J González JM Lisa MN Costello AL Peraro MD Carloni P Bennett B Tierney DL Limansky AS Viale AM Vila AJ 《The Journal of biological chemistry》2007,282(25):18286-18293
Metallo-beta-lactamases (MbetaLs) are zinc-dependent enzymes able to hydrolyze and inactivate most beta-lactam antibiotics. The large diversity of active site structures and metal content among MbetaLs from different sources has limited the design of a pan-MbetaL inhibitor. Here we report the biochemical and biophysical characterization of a novel MbetaL, GOB-18, from a clinical isolate of a Gram-negative opportunistic pathogen, Elizabethkingia meningoseptica. Different spectroscopic techniques, three-dimensional modeling, and mutagenesis experiments, reveal that the Zn(II) ion is bound to Asp120, His121, His263, and a solvent molecule, i.e. in the canonical Zn2 site of dinuclear MbetaLs. Contrasting all other related MbetaLs, GOB-18 is fully active against a broad range of beta-lactam substrates using a single Zn(II) ion in this site. These data further enlarge the structural diversity of MbetaLs. 相似文献
110.
Evidence for a dinuclear active site in the metallo-beta-lactamase BcII with substoichiometric Co(II). A new model for metal uptake 总被引:1,自引:0,他引:1
Llarrull LI Tioni MF Kowalski J Bennett B Vila AJ 《The Journal of biological chemistry》2007,282(42):30586-30595
Metallo-beta-lactamases are zinc-dependent enzymes that constitute one of the main resistance mechanisms to beta-lactam antibiotics. Metallo-beta-lactamases have been characterized both in mono- and dimetallic forms. Despite many studies, the role of each metal binding site in substrate binding and catalysis is still unclear. This is mostly due to the difficulties in assessing the metal content and site occupancy in solution. For this reason, Co(II) has been utilized as a useful probe of the active site structure. We have employed UV-visible, EPR, and NMR spectroscopy to study Co(II) binding to the metallo-beta-lactamase BcII from Bacillus cereus. The spectroscopic features were attributed to the two canonical metal binding sites, the 3H (His(116), His(118), and His(196)) and DCH (Asp(120), Cys(221), and His(263)) sites. These data clearly reveal the coexistence of mononuclear and dinuclear Co(II)-loaded forms at Co(II)/enzyme ratios as low as 0.6. This picture is consistent with the macroscopic dissociation constants here determined from competition binding experiments. A spectral feature previously assigned to the DCH site in the dinuclear species corresponds to a third, weakly bound Co(II) site. The present work emphasizes the importance of using different spectroscopic techniques to follow the metal content and localization during metallo-beta-lactamase turnover. 相似文献