DDX17 is required for efficient DSB repair at DNA:RNA hybrid deficient loci

Proteins with RNA-binding activity are increasingly being implicated in DNA damage responses (DDR). Additionally, DNA:RNA-hybrids are rapidly generated around DNA double-strand breaks (DSBs), and are essential for effective repair. Here, using a meta-analysis of proteomic data, we identify novel DNA repair proteins and characterise a novel role for DDX17 in DNA repair. We found DDX17 to be required for both cell survival and DNA repair in response to numerous agents that induce DSBs. Analysis of DSB repair factor recruitment to damage sites suggested a role for DDX17 early in the DSB ubiquitin cascade. Genome-wide mapping of R-loops revealed that while DDX17 promotes the formation of DNA:RNA-hybrids around DSB sites, this role is specific to loci that have low levels of pre-existing hybrids. We propose that DDX17 facilitates DSB repair at loci that are inefficient at forming DNA:RNA-hybrids by catalysing the formation of DSB-induced hybrids, thereby allowing propagation of the damage response.     

On the competitive exclusion principle

The Competitive Exclusion Principle, formulated by V. Volterra (Memorie del R. Comitato Talassografico Italiano,131, 1–142, 1927) for a number of species competing for a common ecological niche, is extended to a number of species competing for many ecological niches. Supported by an N.I.H. training grant.     

On some metric properties of the systems of compartments

Rules for the enumeration of the strong components of a graph and for the calculation of its variable adjacency matrix are presented. A new method is given to calculate the transfer function of a graphy by analyzing the strong components of the graph, the elementary paths between two nodes, and the linear subgraphs. This work was supported in part by the United States Atomic Energy Commission and the National Aeronautics and Space Administration.     

Evaluation of three varieties ofOpuntia ficus-indica (L.) Miller as hosts of the Cochineal insectDactylopius coccus costa (Homoptera: Dactylopiidae) in a semiarid area of northeastern Mexico

Three varieties of prickly pearOpuntia ficus- indica (Villanueva, Copena, and Jalpa varieties) were evaluated in their capacity to be host of the cochineal insect (Dactylopius coccus Costa) in two localities of northeastern Mexico. The experiment was carried out for two seasons, winter and summer, in 1998. Variables under evaluation were: fresh weight of grana, dry weight of grana, and number of insects. The Villanueva variety showed the highest production for the three variables and there were no differences between the other two varieties. Iturbide locality was superior to Linares for the three variables. Higher production (both dry and fresh weight of grana) was obtained during winter and there were no differences between seasons for number of insects. Figures obtained for the Villanueva variety are slightly higher than those reported in literature for the most productive cochineal areas in Mexico.