The role of environmental factors in the induction of oxidative stress in zebra mussel (<Emphasis Type="Italic">Dreissena polymorpha</Emphasis>)

The aim of this study was to investigate the influence of specific environmental factors, such as temperature, pH, oxygen concentration, and phosphate, nitrate, chloride, sodium, potassium, sulphate, magnesium and calcium ions concentration, as well as microcystins, on the seasonal variations in the activity of the antioxidant system of the zebra mussel. We examined changes in lipid peroxidation (LPO) levels, glutathione content and the catalase activity of mussels inhabiting the two ecosystems, which differ due to their trophic structure and the presence of toxic cyanobacteria. The results show a relationship between the activity of the antioxidant system of zebra mussels and the seasonal fluctuations of environmental parameters: the symptoms of oxidative stress were generally the highest during spring and the lowest during summer in both ecosystems. Our study also revealed that regardless of the study area the most important factors determining the activity of the antioxidant defences of mussels were the mineral composition (particularly magnesium and calcium ions concentrations) and physical parameters of the water (oxygen concentration and pH). However, factors resulting from the trophic status of studied ecosystems, such as limitations in food resources or high concentration of microcystins during cyanobacterial blooms, were periodically responsible for increased level of LPO in the tissues of zebra mussel. These findings may indicate a limited tolerance of the zebra mussel to the local environmental conditions.     

Freeware tool for analysing numbers and sizes of cell colonies

Radiation and Environmental Biophysics - The clonogenic cell survival assay is a basic method to study the cytotoxic effect of radiation and chemical toxins. In large experimental setups, counting...     

Bridging implementation gaps to connect large ecological datasets and complex models

Merging robust statistical methods with complex simulation models is a frontier for improving ecological inference and forecasting. However, bringing these tools together is not always straightforward. Matching data with model output, determining starting conditions, and addressing high dimensionality are some of the complexities that arise when attempting to incorporate ecological field data with mechanistic models directly using sophisticated statistical methods. To illustrate these complexities and pragmatic paths forward, we present an analysis using tree‐ring basal area reconstructions in Denali National Park (DNPP) to constrain successional trajectories of two spruce species (Picea mariana and Picea glauca) simulated by a forest gap model, University of Virginia Forest Model Enhanced—UVAFME. Through this process, we provide preliminary ecological inference about the long‐term competitive dynamics between slow‐growing P. mariana and relatively faster‐growing P. glauca. Incorporating tree‐ring data into UVAFME allowed us to estimate a bias correction for stand age with improved parameter estimates. We found that higher parameter values for P. mariana minimum growth under stress and P. glauca maximum growth rate were key to improving simulations of coexistence, agreeing with recent research that faster‐growing P. glauca may outcompete P. mariana under climate change scenarios. The implementation challenges we highlight are a crucial part of the conversation for how to bring models together with data to improve ecological inference and forecasting.     

Laccase-catalyzed oxidation of 1-(3,4-dimethoxyphenyl)-1-propene using ABTS as mediator

The fungal laccases catalyzed oxidation of 1-(3,4-dimethoxyphenyl)-1-propene (2) with dioxygen in acetate buffer (pH 4.5) producing 1-(3,4-dimethoxyphenyl)propane-1,2-diol (4) and its 1-O-acetyl and 2-O-acetyl derivatives 5 and 6, and 3,4-dimethoxybenzaldehyde (7). However, in phosphate buffer (pH 5.9), the same reaction produced only 4 and 7. When 4 was treated in the same fashion in the phosphate buffer, it was converted into 7 with more than 95 mol% yield. This, together with the formation of 5 and 6 in the acetate buffer, showed that 2 is converted into 3–5 via 1-(3,4-dimethoxyphenyl)propane-1,2-epoxide (3) in the acetate buffer in the presence of ABTS. The major reaction of fungal laccase-catalyzed oxidation of 2 with dioxygen in the presence of ABTS is epoxidation of the double bond conjugated to the aromatic ring.     

Long-Term Patterns in the Population Dynamics of Daphnia longispina,Leptodora kindtii and Cyanobacteria in a Shallow Reservoir: A Self-Organising Map (SOM) Approach

The recognition of long-term patterns in the seasonal dynamics of Daphnia longispina, Leptodora kindtii and cyanobacteria is dependent upon their interactions, the water temperature and the hydrological conditions, which were all investigated between 1999 and 2008 in the lowland Sulejow Reservoir. The biomass of cyanobacteria, densities of D. longispina and L. kindtii, concentration of chlorophyll a and water temperature were assessed weekly from April to October at three sampling stations along the longitudinal reservoir axis. The retention time was calculated using data on the actual water inflow and reservoir volume. A self-organising map (SOM) was used due to high interannual variability in the studied parameters and their often non-linear relationships. Classification of the SOM output neurons into three clusters that grouped the sampling terms with similar biotic states allowed identification of the crucial abiotic factors responsible for the seasonal sequence of events: cluster CL-ExSp (extreme/spring) corresponded to hydrologically unstable cold periods (mostly spring) with extreme values and highly variable abiotic factors, which made abiotic control of the biota dominant; cluster CL-StSm (stable/summer) was associated with ordinary late spring and summer and was characterised by stable non-extreme abiotic conditions, which made biotic interactions more important; and the cluster CL-ExSm (extreme/summer), was associated with late spring/summer and characterised by thermal or hydrological extremes, which weakened the role of biotic factors. The significance of the differences between the SOM sub-clusters was verified by Kruskal-Wallis and post-hoc Dunn tests. The importance of the temperature and hydrological regimes as the key plankton-regulating factors in the dam reservoir, as shown by the SOM, was confirmed by the results of canonical correlation analyses (CCA) of each cluster. The demonstrated significance of hydrology in seasonal plankton dynamics complements the widely accepted pattern proposed by the plankton succession model for lakes, the PEG (Plankton Ecology Group), and may be useful for the formulation of management decisions in dam reservoirs.     

The behaviour of the common hamster (Cricetus cricetus) under zoo conditions

Studies on the behaviour of the common hamster are very rare and fragmentary. From August till the middle of September 2005 we observed behaviour of six individuals of the common hamster (one female and five juveniles: three males and two females) and from the second part of September till October 2005 we observed behaviour of two juvenile males after they were separated from the group. The “Focal animal sampling” was used as an observation method, and the total time of observation amounted to 75 hours. During our observation 7707 bouts of behaviour were recorded. Both social and non-social behaviour were categorised. The number of the non-social behaviour prevailed significantly over the number of the social behaviour (n=496; 6.4%). The most frequent observed non-social behaviour was: head rearing (n=2019; 28%). Among interindividual interactions “escape” (45.4%; n=225) and “vocalisation” (15.7%; n=78) were noticed most frequently. Play-fighting, direct identification, following and hugging were the only aspects of the social behaviour characteristic of the young.The behaviour repertoire of the common hamster seems to be similar to the behaviour of the golden hamster (Mesocricetus auratus).     

ACTN3 genotype distribution across horses representing different utility types and breeds

Molecular Biology Reports - In horses, the identification of the genetic background of phenotypic variation, especially with regard to performance characteristics and predisposition to effort, has...     

Model-based Evidence for Cyclic Phenomena in a High-Elevation,Two-Species Forest

Cyclic phenomena have been the focus of many studies in stressed conifer forests. In these systems, suppressed seedlings are released following the synchronous death of canopy trees. These cycles occur over hundreds of years, and thus studying them in the field is difficult, if not impossible in some cases. This difficulty highlights the advantages of vegetation modeling studies. We used the individual-based gap model, University of Virginia Forest Model Enhanced (UVAFME), to simulate forest dynamics over time at a high-elevation, subalpine forest (dominated by Engelmann spruce and subalpine fir) in southern Wyoming. Following model calibration, UVAFME was validated by running it up an elevation gradient to determine if it could simulate changes in species composition with elevation. UVAFME was then run exclusively at the high-elevation location for periods of 3000 years to simulate long-term forest dynamics at the site. It was found that without the intrusion of exogenous disturbances, the subalpine zone of the Rocky Mountains demonstrates cyclic phenomena, both at the plot scale and the landscape scale. By itself, Engelmann spruce demonstrates a natural periodicity of 300 years, whereas subalpine fir has a natural periodicity of 200 years. In the two-species forest, both species have a periodicity of 300 years. This output corresponds well with field data from similar high-elevation conifer sites. These results, along with other examples of cyclic phenomena in ecological systems, indicate that periodicities in ecosystems may be more common than previously thought, though they may be difficult to distinguish due to disturbances and the time- and space-scales at which they occur.